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Donna Karolchik

Active 2003–2017

34
Papers
19,652
Citations
32
h-index
33
i10-index

Citations

Citations per year for Donna Karolchik1930: 1 citations1967: 1 citations1973: 1 citations1988: 3 citations1991: 1 citations1992: 1 citations1993: 2 citations1998: 3 citations2001: 2 citations2002: 1 citations2003: 30 citations2004: 119 citations2005: 166 citations2006: 189 citations2007: 261 citations2008: 248 citations2009: 344 citations2010: 416 citations2011: 461 citations2012: 418 citations2013: 455 citations2014: 466 citations2015: 395 citations2016: 344 citations2017: 337 citations2018: 306 citations2019: 630 citations2020: 541 citations2021: 456 citations2022: 337 citations2023: 289 citations2024: 386 citations2025: 164 citations2026: 7 citations1931–1966: no citations, so these years are not shown1968–1972: no citations, so these years are not shown1974–1987: no citations, so these years are not shown1989–1990: no citations, so these years are not shown1994–1997: no citations, so these years are not shown1999–2000: no citations, so these years are not shown

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 3,764 citing papers, 31.6% of this breakdownUnited Kingdom: 993 citing papers, 8.3% of this breakdownChina: 840 citing papers, 7.1% of this breakdownGermany: 729 citing papers, 6.1% of this breakdownCanada: 475 citing papers, 4% of this breakdownFrance: 390 citing papers, 3.3% of this breakdownAustralia: 350 citing papers, 2.9% of this breakdownItaly: 315 citing papers, 2.7% of this breakdownSpain: 305 citing papers, 2.6% of this breakdownJapan: 294 citing papers, 2.5% of this breakdownNetherlands: 267 citing papers, 2.2% of this breakdownSwitzerland: 263 citing papers, 2.2% of this breakdown
0%31.6%Other 24.5%

Institutions

Fields

  • Biochemistry, Genetics and Molecular Biology77.5%
  • Medicine10.8%
  • Agricultural and Biological Sciences4.6%
  • Immunology and Microbiology2.3%
  • Neuroscience1.6%
  • Computer Science1.2%
  • Other2%

Topics

  • Genomics and Chromatin Dynamics6.9%
  • Genomics and Phylogenetic Studies6.6%
  • RNA Research and Splicing5.7%
  • RNA modifications and cancer5.4%
  • RNA and protein synthesis mechanisms5.3%
  • Epigenetics and DNA Methylation4%
  • Other66.1%

Coauthors

All papers

Open in search
  1. The UCSC Genome Browser Database: update 2006

    Authors: Angela S. Hinrichs, Donna Karolchik, Robert Baertsch, Galt P. Barber, Gill Bejerano, Hiram Clawson, Mark Diekhans, Terrence S. Furey, Rachel A. Harte, Fan Hsu, Jennifer Hillman-Jackson, Robert M. Kuhn, Jakob Skou Pedersen, Andy Pohl, Brian J. Raney, Kate R. Rosenbloom, Adam C. Siepel, Kayla E. Smith, Charles W. Sugnet, A. Sultan-Qurraie, Daryl J. Thomas, Heather Trumbower, Ryan J. Weber, M. Weirauch, Ann S. Zweig, David Haussler, W. James Kent - Nucleic Acids Research, Nucleic Acids Res. 2005 cited by 1,799

  2. BigWig and BigBed: enabling browsing of large distributed datasets

    Authors: W. James Kent, Ann S. Zweig, Galt P. Barber, Angie S. Hinrichs, Donna Karolchik - Bioinformatics, Bioinform. 2010 cited by 1,471

  3. The UCSC Table Browser data retrieval tool

    Authors: Donna Karolchik, Angela S. Hinrichs, Terrence S. Furey, Krishna M. Roskin, Charles W. Sugnet, David Haussler, W. James Kent - Nucleic Acids Research, Nucleic Acids Res. 2003 cited by 2,533

  4. ENCODE Data in the UCSC Genome Browser: year 5 update

    Authors: Kate R. Rosenbloom, Cricket A. Sloan, Venkat S. Malladi, Timothy R. Dreszer, Katrina Learned, Vanessa Kirkup, Matthew C. Wong, Morgan Maddren, Ruihua Fang, Steven G. Heitner, Brian T. Lee, Galt P. Barber, Rachel A. Harte, Mark Diekhans, Jeffrey C. Long, Steven P. Wilder, Ann S. Zweig, Donna Karolchik, Robert M. Kuhn, David Haussler, W. James Kent - Nucleic Acids Research, Nucleic Acids Res. 2012 cited by 806

  5. Track data hubs enable visualization of user-defined genome-wide annotations on the UCSC Genome Browser

    Authors: Brian J. Raney, Timothy R. Dreszer, Galt P. Barber, Hiram Clawson, Pauline A. Fujita, Ting Wang, Ngan Nguyen, Benedict Paten, Ann S. Zweig, Donna Karolchik, W. James Kent - Bioinformatics, Bioinform. 2013 cited by 472

  6. The UCSC Genome Browser database: update 2011

    Authors: Pauline A. Fujita, Brooke L. Rhead, Ann S. Zweig, Angie S. Hinrichs, Donna Karolchik, Melissa S. Cline, Mary Goldman, Galt P. Barber, Hiram Clawson, António Coelho, Mark Diekhans, Timothy R. Dreszer, Belinda Giardine, Rachel A. Harte, Jennifer Hillman-Jackson, Fan Hsu, Vanessa Kirkup, Robert M. Kuhn, Katrina Learned, Chin H. Li, Laurence R. Meyer, Andy Pohl, Brian J. Raney, Kate R. Rosenbloom, Kayla E. Smith, David Haussler, W. James Kent - Nucleic Acids Research, Nucleic Acids Res. 2010 cited by 1,869

  7. The UCSC Genome Browser database: 2015 update

    Authors: Kate R. Rosenbloom, Joel Armstrong, Galt P. Barber, Jonathan Casper, Hiram Clawson, Mark Diekhans, Timothy R. Dreszer, Pauline A. Fujita, Luvina Guruvadoo, Maximilian Haeussler, Rachel A. Harte, Steven G. Heitner, Glenn Hickey, Angie S. Hinrichs, Robert Hubley, Donna Karolchik, Katrina Learned, Brian T. Lee, Chin H. Li, Karen H. Miga, Ngan Nguyen, Benedict Paten, Brian J. Raney, Arian F. A. Smit, Matthew L. Speir, Ann S. Zweig, David Haussler, Robert M. Kuhn, W. James Kent - Nucleic Acids Research, Nucleic Acids Res. 2014 cited by 952

  8. The UCSC Genome Browser Database

    Authors: Donna Karolchik, Robert Baertsch, Mark Diekhans, Terrence S. Furey, Angela S. Hinrichs, Yontao Lu, Krishna M. Roskin, Matt Schwartz, Charles W. Sugnet, Daryl J. Thomas, Ryan J. Weber, David Haussler, W. James Kent - Nucleic Acids Research, Nucleic Acids Res. 2003 cited by 1,932

  9. The UCSC Genome Browser

    Authors: Donna Karolchik, Angie S. Hinrichs, W. James Kent - Current Protocols in Bioinformatics 2009 cited by 352

  10. The UCSC Genome Browser database: 2018 update

    Authors: Jonathan Casper, Ann S. Zweig, Chris Villarreal, Cath Tyner, Matthew L. Speir, Kate R. Rosenbloom, Brian J. Raney, Christopher M. Lee, Brian T. Lee, Donna Karolchik, Angie S. Hinrichs, Maximilian Haeussler, Luvina Guruvadoo, Jairo Navarro Gonzalez, David Gibson, Ian T. Fiddes, Christopher Eisenhart, Mark Diekhans, Hiram Clawson, Galt P. Barber, Joel Armstrong, David Haussler, Robert M. Kuhn, W. James Kent - Nucleic Acids Research, Nucleic Acids Res. 2017 cited by 534

  11. The UCSC Genome Browser database: 2014 update

    Authors: Donna Karolchik, Galt P. Barber, Jonathan Casper, Hiram Clawson, Melissa S. Cline, Mark Diekhans, Timothy R. Dreszer, Pauline A. Fujita, Luvina Guruvadoo, Maximilian Haeussler, Rachel A. Harte, Steven G. Heitner, Angie S. Hinrichs, Katrina Learned, Brian T. Lee, Chin H. Li, Brian J. Raney, Brooke L. Rhead, Kate R. Rosenbloom, Cricket A. Sloan, Matthew L. Speir, Ann S. Zweig, David Haussler, Robert M. Kuhn, W. James Kent - Nucleic Acids Research, Nucleic Acids Res. 2013 cited by 705

  12. The UCSC Genome Browser database: extensions and updates 2013

    Authors: Laurence R. Meyer, Ann S. Zweig, Angie S. Hinrichs, Donna Karolchik, Robert M. Kuhn, Matthew C. Wong, Cricket A. Sloan, Kate R. Rosenbloom, Greg Roe, Brooke L. Rhead, Brian J. Raney, Andy Pohl, Venkat S. Malladi, Chin H. Li, Brian T. Lee, Katrina Learned, Vanessa Kirkup, Fan Hsu, Steven G. Heitner, Rachel A. Harte, Maximilian Haeussler, Luvina Guruvadoo, Mary Goldman, Belinda Giardine, Pauline A. Fujita, Timothy R. Dreszer, Mark Diekhans, Melissa S. Cline, Hiram Clawson, Galt P. Barber, David Haussler, W. James Kent - Nucleic Acids Research, Nucleic Acids Res. 2012 cited by 923

  13. The UCSC Genome Browser database: update 2010

    Authors: Brooke L. Rhead, Donna Karolchik, Robert M. Kuhn, Angie S. Hinrichs, Ann S. Zweig, Pauline A. Fujita, Mark Diekhans, Kayla E. Smith, Kate R. Rosenbloom, Brian J. Raney, Andy Pohl, Michael Pheasant, Laurence R. Meyer, Katrina Learned, Fan Hsu, Jennifer Hillman-Jackson, Rachel A. Harte, Belinda Giardine, Timothy R. Dreszer, Hiram Clawson, Galt P. Barber, David Haussler, W. James Kent - Nucleic Acids Research, Nucleic Acids Res. 2009 cited by 576

  14. The UCSC Genome Browser database: 2016 update

    Authors: Matthew L. Speir, Ann S. Zweig, Kate R. Rosenbloom, Brian J. Raney, Benedict Paten, Parisa Nejad, Brian T. Lee, Katrina Learned, Donna Karolchik, Angie S. Hinrichs, Steven G. Heitner, Rachel A. Harte, Maximilian Haeussler, Luvina Guruvadoo, Pauline A. Fujita, Christopher Eisenhart, Mark Diekhans, Hiram Clawson, Jonathan Casper, Galt P. Barber, David Haussler, Robert M. Kuhn, W. James Kent - Nucleic Acids Research, Nucleic Acids Res. 2015 cited by 425

  15. Comparative analyses of multi-species sequences from targeted genomic regions

    Authors: James W. Thomas, Jeff Touchman, Robert W. Blakesley, Gerard G. Bouffard, Stephen M. Beckstrom‐Sternberg, Elliott H. Margulies, M. Blanchette, Adam Siepel, Pamela J. Thomas, Jennifer C. McDowell, Baishali Maskeri, Nancy F. Hansen, Matthias S Schwartz, R. Weber, W. James Kent, Donna Karolchik, Trevor C. Bruen, Rachel B. Bevan, David J. Cutler, Scott Schwartz, Laura Elnitski, Jacquelyn R. Idol, Arjun Prasad, Shih-Queen Lee-Lin, Valerie V. Maduro, Tyrone J. Summers, Matthew E. Portnoy, Nicole Dietrich, Naseem Akhter, Kalkidan Ayele, Beatrice Benjamin, Kathleen A. Cariaga, Charles P. Brinkley, Shelise Brooks, Stephen J. Granite, Xiaoxiang Guan, Jyoti Gupta, Payam Haghighi, Shi-ling Ho, Mengwei Huang, Eric Karlins, P. L. Laric, Richelle Legaspi, Michelle Gek Liang Lim, Quino Maduro, Catherine A. Masiello, Stephen D. Mastrian, Joanne Comi McCloskey, Russell L. Pearson, Sirintorn Stantripop, E. E. Tiongson, J. T. Tran, Cyrus Tsurgeon, Jennifer Vogt, Michelle Walker, Keith Wetherby, L. S. Wiggins, Alice Young, L.-H. Zhang, Kazutoyo Osoegawa, Baoli Zhu, Boxun Zhao, Chung Li Shu, Pieter J. de Jong, Charles E. Lawrence, Arian F. A. Smit, Aravinda Chakravarti, David Haussler, P. Green, Webb Miller, E. D. Green - Nature 2003 cited by 665

  16. The UCSC Genome Browser Database: update 2009

    Authors: Robert M. Kuhn, Donna Karolchik, Ann S. Zweig, Ting Wang, Kayla E. Smith, Kate R. Rosenbloom, Brooke L. Rhead, Brian J. Raney, Andy Pohl, Michael Pheasant, Laurence R. Meyer, Fan Hsu, Angela S. Hinrichs, Rachel A. Harte, Belinda Giardine, Pauline A. Fujita, Mark Diekhans, Timothy R. Dreszer, Hiram Clawson, Galt P. Barber, David Haussler, W. James Kent - Nucleic Acids Research, Nucleic Acids Res. 2008 cited by 385

  17. The UCSC Genome Browser database: extensions and updates 2011

    Authors: Timothy R. Dreszer, Donna Karolchik, Ann S. Zweig, Angie S. Hinrichs, Brian J. Raney, Robert M. Kuhn, Laurence R. Meyer, Matthew C. Wong, Cricket A. Sloan, Kate R. Rosenbloom, Greg Roe, Brooke L. Rhead, Andy Pohl, Venkat S. Malladi, Chin H. Li, Katrina Learned, Vanessa Kirkup, Fan Hsu, Rachel A. Harte, Luvina Guruvadoo, Mary Goldman, Belinda Giardine, Pauline A. Fujita, Mark Diekhans, Melissa S. Cline, Hiram Clawson, Galt P. Barber, David Haussler, W. James Kent - Nucleic Acids Research, Nucleic Acids Res. 2011 cited by 363

  18. ENCODE whole-genome data in the UCSC Genome Browser: update 2012

    Authors: Kate R. Rosenbloom, Timothy R. Dreszer, Jeffrey C. Long, Venkat S. Malladi, Cricket A. Sloan, Brian J. Raney, Melissa S. Cline, Donna Karolchik, Galt P. Barber, Hiram Clawson, Mark Diekhans, Pauline A. Fujita, Mary Goldman, Robert C. Gravell, Rachel A. Harte, Angie S. Hinrichs, Vanessa Kirkup, Robert M. Kuhn, Katrina Learned, Morgan Maddren, Laurence R. Meyer, Andy Pohl, Brooke L. Rhead, Matthew C. Wong, Ann S. Zweig, David Haussler, W. James Kent - Nucleic Acids Research, Nucleic Acids Res. 2011 cited by 260

  19. The UCSC Genome Browser database: 2017 update

    Authors: Cath Tyner, Galt P Barber, Jonathan D. Casper, Hiram Clawson, Mark Diekhans, Christopher Eisenhart, Clayton M. Fischer, David Gibson, Jairo Navarro Gonzalez, Luvina Guruvadoo, Maximilian Haeussler, Steve Heitner, Angie S. Hinrichs, Donna Karolchik, Brian T. Lee, Christopher M. Lee, Parisa Nejad, Brian J. Raney, Kate R. Rosenbloom, Matthew L Speir, Chris Villarreal, John Vivian, Ann S. Zweig, David Haussler, Robert M. Kuhn, W. James Kent - Nucleic Acids Research, Nucleic Acids Res. 2016 cited by 313

  20. UCSC genome browser tutorial

    Authors: Ann S. Zweig, Donna Karolchik, Robert M. Kuhn, David Haussler, W. James Kent - Genomics 2008 cited by 121

  21. UCSC Data Integrator and Variant Annotation Integrator

    Authors: Angie S. Hinrichs, Brian J. Raney, Matthew L. Speir, Brooke L. Rhead, Jonathan Casper, Donna Karolchik, Robert M. Kuhn, Kate R. Rosenbloom, Ann S. Zweig, David Haussler, W. James Kent - Bioinformatics, Bioinform. 2016 cited by 77

  22. Navigating protected genomics data with UCSC Genome Browser in a Box

    Authors: Maximilian Haeussler, Brian J. Raney, Angie S. Hinrichs, Hiram Clawson, Ann S. Zweig, Donna Karolchik, Jonathan Casper, Matthew L. Speir, David Haussler, W. James Kent - Bioinformatics, Bioinform. 2014 cited by 49

  23. ENCODE whole-genome data in the UCSC genome browser (2011 update)

    Authors: Brian J. Raney, Melissa S. Cline, Kate R. Rosenbloom, Timothy R. Dreszer, Katrina Learned, Galt P. Barber, Laurence R. Meyer, Cricket A. Sloan, Venkat S. Malladi, Krishna M. Roskin, Bernard B. Suh, Angie S. Hinrichs, Hiram Clawson, Ann S. Zweig, Vanessa Kirkup, Pauline A. Fujita, Brooke L. Rhead, Kayla E. Smith, Andy Pohl, Robert M. Kuhn, Donna Karolchik, David Haussler, W. James Kent - Nucleic Acids Research, Nucleic Acids Res. 2010 cited by 177

  24. The UCSC Cancer Genomics Browser

    Authors: Jingchun Zhu, Zack Sanborn, Stephen C. Benz, Christopher Szeto, Fan Hsu, Robert M. Kuhn, Donna Karolchik, John G. Archie, Marc E. Lenburg, Laura J. Esserman, W. James Kent, David Haussler, Ting Wang - Nature Methods 2009 cited by 175