Benedict Paten
Active 2007–2025
- 185
- Papers
- 46,716
- Citations
- 85
- h-index
- 167
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology69.6%
- Medicine9.8%
- Agricultural and Biological Sciences6.8%
- Computer Science3.5%
- Immunology and Microbiology2.3%
- Environmental Science1.8%
- Other6.2%
Topics
- Genomics and Phylogenetic Studies9.5%
- RNA modifications and cancer5.2%
- RNA and protein synthesis mechanisms4.3%
- Chromosomal and Genetic Variations4.2%
- RNA Research and Splicing3.9%
- Genomics and Chromatin Dynamics3.7%
- Other69.2%
Coauthors
- Mark Diekhans36
- David Haussler35
- Joel Armstrong35
- Glenn Hickey30
- Miten Jain28
- Adam M. Novak26
- Jordan M. Eizenga24
- Karen H. Miga21
- Pi-Chuan Chang19
- Erik Garrison18
- Kishwar Shafin17
- Andrew Carroll16
- Ian T. Fiddes16
- Mitchell R. Vollger16
- Arang Rhie15
- Hiram Clawson15
- Jean Monlong15
- David Porubskỳ14
- Matteo Bianchi14
- Gregory Andrews13
- Matthew J. Christmas13
- Sergey Koren13
- Alexey Kolesnikov12
- Hugh E. Olsen12
All papers
- The complete sequence of a human genome
Authors: Sergey Nurk, Sergey Koren, Arang Rhie, Mikko Rautiainen, Andrey V. Bzikadze, Alla Mikheenko, Mitchell R. Vollger, Nicolas Altemose, Lev Uralsky, Ariel Gershman, Sergey Aganezov, Savannah J. Hoyt, Mark Diekhans, Glennis A. Logsdon, Michael Alonge, Stylianos E. Antonarakis, Matthew Borchers, Gerard G. Bouffard, Shelise Brooks, Gina V. Caldas, Nae-Chyun Chen, Haoyu Cheng, Chen-Shan Chin, William Chow, Leonardo Gomes de Lima, Philip C. Dishuck, Richard Durbin, Tatiana Dvorkina, Ian T. Fiddes, Giulio Formenti, Robert S. Fulton, Arkarachai Fungtammasan, Erik Garrison, Patrick G. S. Grady, Tina A. Graves-Lindsay, Ira M. Hall, Nancy F. Hansen, Gabrielle A. Hartley, Marina Haukness, Kerstin Howe, Michael W. Hunkapiller, Chirag Jain, Miten Jain, Erich D. Jarvis, Peter Kerpedjiev, Melanie Kirsche, Mikhail Kolmogorov, Jonas Korlach, Milinn Kremitzki, Heng Li, Valerie V. Maduro, Tobias Marschall, Ann M. Mc Cartney, Jennifer McDaniel, Danny E. Miller, James C. Mullikin, Eugene W. Myers, Nathan D. Olson, Benedict Paten, Paul Peluso, Pavel A. Pevzner, David Porubskỳ, Tamara Potapova, Е. И. Рогаев, Jeffrey Rosenfeld, Steven L. Salzberg, Valérie Schneider, Fritz J. Sedlazeck, Kishwar Shafin, Colin J. Shew, Alaina Shumate, Ying Sims, Arian F. A. Smit, Daniela C. Soto, Ivan Sović, Jessica M. Storer, Aaron Streets, Beth A. Sullivan, Françoise Thibaud‐Nissen, James Torrance, Justin Wagner, Brian P. Walenz, Aaron M. Wenger, Jonathan Wood, Chunlin Xiao, Stephanie M. Yan, Alice Young, Samantha Zarate, Urvashi Surti, Rajiv C. McCoy, Megan Y. Dennis, Ivan A. Alexandrov, Jennifer L. Gerton, Rachel J. O’Neill, Winston Timp, Justin M. Zook, Michael C. Schatz, Evan E. Eichler, Karen H. Miga, Adam M. Phillippy - Science 2022 cited by 3,421
- GENCODE reference annotation for the human and mouse genomes
Authors: Adam Frankish, Mark Diekhans, Anne-Maud Ferreira, Rory Johnson, Irwin Jungreis, Jane E. Loveland, Jonathan M. Mudge, Cristina Sisu, James C. Wright, Joel Armstrong, If Barnes, Andrew E. Berry, Alexandra Bignell, Silvia Carbonell Sala, Jacqueline Chrast, Fiona Cunningham, Tomás Di Domenico, Sarah M. Donaldson, Ian T. Fiddes, Carlos García-Girón, Jose M. Gonzalez, Tiago Grego, Matthew Hardy, Thibaut Hourlier, Toby Hunt, Osagie G. Izuogu, Julien Lagarde, Fergal J. Martin, Laura Martínez, Shamika Mohanan, Paul Muir, Fabio C. P. Navarro, Anne Parker, Baikang Pei, Fernando Pozo, Magali Ruffier, Bianca M. Schmitt, Eloise Stapleton, Marie-Marthe Suner, Irina Sycheva, Barbara Uszczynska-Ratajczak, Jinrui Xu, Andrew D. Yates, Daniel R. Zerbino, Yan Zhang, Bronwen L. Aken, Jyoti Choudhary, Mark Gerstein, Roderic Guigó, Tim J. P. Hubbard, Manolis Kellis, Benedict Paten, Alexandre Reymond, Michael L. Tress, Paul Flicek - Nucleic Acids Research, Nucleic Acids Res. 2018 cited by 3,502
- GENCODE 2021
Authors: Adam Frankish, Mark Diekhans, Irwin Jungreis, Julien Lagarde, Jane E. Loveland, Jonathan M. Mudge, Cristina Sisu, James C. Wright, Joel Armstrong, If Barnes, Andrew E. Berry, Alexandra Bignell, Carles Boix, Silvia Carbonell Sala, Fiona Cunningham, Tomás Di Domenico, Sarah M. Donaldson, Ian T. Fiddes, Carlos García-Girón, Jose M. Gonzalez, Tiago Grego, Matthew Hardy, Thibaut Hourlier, Kevin L. Howe, Toby Hunt, Osagie G. Izuogu, Rory Johnson, Fergal J. Martin, Laura Martínez, Shamika Mohanan, Paul Muir, Fabio C. P. Navarro, Anne Parker, Baikang Pei, Fernando Pozo, Ferriol Calvet Riera, Magali Ruffier, Bianca M. Schmitt, Eloise Stapleton, Marie-Marthe Suner, Irina Sycheva, Barbara Uszczynska-Ratajczak, Maxim Y. Wolf, Jinrui Xu, Yucheng T. Yang, Andrew D. Yates, Daniel R. Zerbino, Yan Zhang, Jyoti Choudhary, Mark Gerstein, Roderic Guigó, Tim J. P. Hubbard, Manolis Kellis, Benedict Paten, Michael L. Tress, Paul Flicek - Nucleic Acids Research, Nucleic Acids Res. 2020 cited by 1,466
- Nanopore sequencing and assembly of a human genome with ultra-long reads
Authors: Miten Jain, Sergey Koren, Josh Quick, AC Rand, TA Sasani, JR Tyson, Andrew D. Beggs, AT Dilthey, IT Fiddes, Sudhakar Malla, Hannah Marriott, KH Miga, Tom Nieto, Justin O’Grady, HE Olsen, BS Pedersen, Arang Rhie, Hollian Richardson, AR Quinlan, TP Snutch, Louise Tee, Benedict Paten, AM Phillippy, JT Simpson, Nicholas J. Loman, Matthew Loose - Nature Biotechnology 2017 cited by 2,098
- The Oxford Nanopore MinION: delivery of nanopore sequencing to the genomics community
Authors: Miten Jain, Hugh E. Olsen, Benedict Paten, Mark Akeson - Genome biology 2016 cited by 1,681
- GENCODE: reference annotation for the human and mouse genomes in 2023
Authors: Adam Frankish, Silvia Carbonell Sala, Mark Diekhans, Irwin Jungreis, Jane E. Loveland, Jonathan M. Mudge, Cristina Sisu, James C. Wright, Carme Arnan, If Barnes, Abhimanyu Banerjee, Ruth Bennett, Andrew E. Berry, Alexandra Bignell, Carles Boix, Ferriol Calvet Riera, Daniel Cerdán-Vélez, Fiona Cunningham, Claire Davidson, Sarah M. Donaldson, Cagatay Dursun, Reham Fatima, Stefano Giorgetti, Carlos García-Girón, Jose M. Gonzalez, Matthew Hardy, Peter W. Harrison, Thibaut Hourlier, Zoe Hollis, Toby Hunt, Benjamin James, Yunzhe Jiang, Rory Johnson, Mike P. Kay, Julien Lagarde, Fergal J. Martin, Laura Martínez Gómez, Surag Nair, Pengyu Ni, Fernando Pozo, Vivek Ramalingam, Magali Ruffier, Bianca M. Schmitt, Jacob M. Schreiber, Emily Steed, Marie-Marthe Suner, Dulika Sumathipala, Irina Sycheva, Barbara Uszczynska-Ratajczak, Elizabeth Wass, Yucheng T. Yang, Andrew D. Yates, Zahoor Zafrulla, Jyoti Choudhary, Mark Gerstein, Roderic Guigó, Tim J. P. Hubbard, Manolis Kellis, Anshul Kundaje, Benedict Paten, Michael L. Tress, Paul Flicek - Nucleic Acids Research, Nucleic Acids Res. 2022 cited by 648
- The Human Pangenome Project: a global resource to map genomic diversity
Authors: Ting Wang, Lucinda Antonacci-Fulton, Kerstin Howe, Heather A. Lawson, Julian Lucas, Adam M. Phillippy, Alice B. Popejoy, Mobin Asri, Caryn Carson, Mark Chaisson, Xian Chang, Robert Cook‐Deegan, Adam L. Felsenfeld, Robert S. Fulton, Erik Garrison, Nanibaa’ A. Garrison, Tina A. Graves-Lindsay, Hanlee P. Ji, Eimear E. Kenny, Barbara A. Koenig, Daofeng Li, Tobias Marschall, Joshua F. McMichael, Adam M. Novak, Deepak Purushotham, Valérie Schneider, Baergen I. Schultz, Michael W. Smith, Heidi J. Sofia, Tsachy Weissman, Paul Flicek, Heng Li, Karen H. Miga, Benedict Paten, Erich D. Jarvis, Ira M. Hall, Evan E. Eichler, David Haussler - Nature 2022 cited by 565
- Variation graph toolkit improves read mapping by representing genetic variation in the reference
Authors: Erik Garrison, Jouni Sirén, Adam M. Novak, Glenn Hickey, Jordan M. Eizenga, Eric T. Dawson, William E. Jones, Shilpa Garg, Charles Markello, Michael F. Lin, Benedict Paten, Richard Durbin - Nature Biotechnology 2018 cited by 885
- Toil enables reproducible, open source, big biomedical data analyses
Authors: John Vivian, Arjun A. Rao, Frank Austin Nothaft, Christopher Ketchum, Joel Armstrong, Adam M. Novak, Jacob Pfeil, Jake Narkizian, Alden Deran, Audrey Musselman-Brown, Hannes Schmidt, Peter Amstutz, Brian Craft, Mary J. Goldman, Kate R. Rosenbloom, Melissa Cline, Brian D. O’Connor, Megan Hanna, Chet Birger, W. James Kent, David A. Patterson, Anthony D. Joseph, Jingchun Zhu, Sasha Zaranek, Gad Getz, David Haussler, Benedict Paten - Nature Biotechnology 2017 cited by 1,444
- Progressive Cactus is a multiple-genome aligner for the thousand-genome era
Authors: Joel Armstrong, Glenn Hickey, Mark Diekhans, Ian T. Fiddes, Adam M. Novak, Alden Deran, Qi Fang, Duo Xie, Shaohong Feng, Josefin Stiller, Diane P. Genereux, Jeremy Johnson, Voichita D. Marinescu, Jessica Alföldi, Robert S. Harris, Kerstin Lindblad‐Toh, David Haussler, Elinor K. Karlsson, Erich D. Jarvis, Guojie Zhang, Benedict Paten - Nature 2020 cited by 676
- Complete genomic and epigenetic maps of human centromeres
Authors: Nicolas Altemose, Glennis A. Logsdon, Andrey V. Bzikadze, Pragya Sidhwani, Sasha A. Langley, Gina V. Caldas, Savannah J. Hoyt, Lev Uralsky, Fedor Ryabov, Colin J. Shew, Michael E.G. Sauria, Matthew Borchers, Ariel Gershman, Alla Mikheenko, В. А. Шепелев, Tatiana Dvorkina, Olga Kunyavskaya, Mitchell R. Vollger, Arang Rhie, Ann M. Mc Cartney, Mobin Asri, Ryan Lorig-Roach, Kishwar Shafin, Julian Lucas, Sergey Aganezov, Daniel R. Olson, Leonardo Gomes de Lima, Tamara Potapova, Gabrielle A. Hartley, Marina Haukness, Peter Kerpedjiev, Fedor Gusev, Kristof Tigyi, Shelise Brooks, Alice Young, Sergey Nurk, Sergey Koren, Sofie R. Salama, Benedict Paten, Е. И. Рогаев, Aaron Streets, Gary H. Karpen, Abby F. Dernburg, Beth A. Sullivan, Aaron F. Straight, Travis J. Wheeler, Jennifer L. Gerton, Evan E. Eichler, Adam M. Phillippy, Winston Timp, Megan Y. Dennis, Rachel J. O’Neill, Justin M. Zook, Michael C. Schatz, Pavel A. Pevzner, Mark Diekhans, Charles H. Langley, Ivan A. Alexandrov, Karen H. Miga - Science 2022 cited by 658
- Nanopore native RNA sequencing of a human poly(A) transcriptome
Authors: Rachael E. Workman, Alison D. Tang, Paul S. Tang, Miten Jain, John R. Tyson, Roham Razaghi, Philip C. Zuzarte, Timothy Gilpatrick, Alexander Payne, Joshua Quick, Norah Sadowski, Nadine Holmes, Jaqueline Góes de Jesus, Karen L. Jones, Cameron M. Soulette, Terrance P. Snutch, Nicholas J. Loman, Benedict Paten, Matthew Loose, Jared T. Simpson, Hugh E. Olsen, Angela N. Brooks, Mark Akeson, Winston Timp - Nature Methods 2019 cited by 750
- Pangenomics enables genotyping of known structural variants in 5202 diverse genomes
Authors: Jouni Sirén, Jean Monlong, Xian Chang, Adam M. Novak, Jordan M. Eizenga, Charles Markello, Jonas A. Sibbesen, Glenn Hickey, Pi-Chuan Chang, Andrew Carroll, Namrata Gupta, Stacey Gabriel, Thomas W. Blackwell, Aakrosh Ratan, Kent D. Taylor, Stephen S. Rich, Jerome I. Rotter, David Haussler, Erik Garrison, Benedict Paten - Science 2021 cited by 412
- Pangenome Graphs
Authors: Jordan M. Eizenga, Adam M. Novak, Jonas A. Sibbesen, Simon Heumos, Ali Ghaffaari, Glenn Hickey, Xian Chang, Josiah Seaman, Robin Rounthwaite, Jana Ebler, Mikko Rautiainen, Shilpa Garg, Benedict Paten, Tobias Marschall, Jouni Sirén, Erik Garrison - Annual Review of Genomics and Human Genetics 2020 cited by 349
- Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
Authors: Fabio Pardi, Damian Keefe, Benedict Paten, Tim Massingham, Simon Whelan, Abel Ureta‐Vidal, Ari Löytynoja, Paul Flicek, Ewan Birney, Simon Whelan, Ewan Birney, Nick Goldman, Robert E. Thurman, Fidencio Neri, Shane Neph, Kirsten Lee, Jeff Goldy, Anthony Shafer, Michael O. Dorschner, Molly Weaver, Richard Sandstrom, J Stamatoyannopoulos, Andrew Haydock, Richard Sandstrom, William Stafford Noble, J Stamatoyannopoulos, Nathan Day, Richard Humbert, J Stamatoyannopoulos, Peter J. Sabo, Anindya Dutta, Ankit Malhotra, Neerja Karnani, Christopher M. Taylor, Roderic Guigó, Anindya Dutta, Patrick J. Boyle, Man Yu, Tyler Alioto, Josep F. Abril, Roderic Guigó, Eduardo Eyras, Núria López-Bigas, Philipp Kapranov, Josep F. Abril, Robert Castelo, Julien Lagarde, Jorg Drenkow, Eduardo Eyras, Srinka Ghosh, Evelyn J. Cheung, David A. Nix, Philipp Kapranov, Madhavan Ganesh, Ian Bell, Jill Cheng, Sylvain Foissac, Eric D. Green, Hari Tammana, Jörg Drenkow, T Gingeras, Valerie V.B. Maduro, Sujit Dike, T Gingeras, Yutao Fu, Ulaş Karaöz, Francis S. Collins, Valerie V. Maduro, Elliott H. Margulies, Eric D. Green, Hennady P. Shulha, Elliott H. Margulies, Jacquelyn R. Idol, Michael Snyder, Anason Halees, Xiaoling Zhang, Mousheng Xu, Ulaş Karaöz, Alexander E. Urban, Yutao Fu, Joel Rozowsky, Hennady P. Shulha, Yong Yu, Jaafar N. Haidar, Mark Gerstein, Jane M. Lin, Ghia Euskirchen, Jiaqian Wu, Ugrappa Nagalakshmi, M Snyder, Stephen E. Hartman, Peter R. Kraus, Pawandeep Dhami, Alexander E. Urban, Deyou Zheng, Joel Rozowsky, David Vetrie, Zhengdong D. Zhang, Ian Dunham, Michael Seringhaus and 212 more - Nature 2007 cited by 5,283
- The UCSC Genome Browser database: 2024 update
Authors: Brian J. Raney, Galt P Barber, Anna Benet‐Pagès, Jonathan D. Casper, Hiram Clawson, Melissa Cline, Mark Diekhans, Clayton M. Fischer, Jairo Navarro Gonzalez, Glenn Hickey, Angie S. Hinrichs, Robert M. Kuhn, Brian T. Lee, Christopher M. Lee, Philippe Le Mercier, Karen H. Miga, Luis R Nassar, Parisa Nejad, Benedict Paten, Gerardo Perez, Daniel Schmelter, Matthew L Speir, Brittney Wick, Ann S. Zweig, David Haussler, W. James Kent, Maximilian Haeussler - Nucleic Acids Research 2023 cited by 358
- Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes
Authors: Kishwar Shafin, Trevor Pesout, Ryan Lorig-Roach, Marina Haukness, Hugh E. Olsen, Colleen M. Bosworth, Joel Armstrong, Kristof Tigyi, Nicholas Maurer, Sergey Koren, Fritz J. Sedlazeck, Tobias Marschall, Simon Mayes, Vânia Costa, Justin M. Zook, Kelvin J. Liu, Duncan Kilburn, Melanie Sorensen, Katherine M. Munson, Mitchell R. Vollger, Jean Monlong, Erik Garrison, Evan E. Eichler, Sofie R. Salama, David Haussler, Richard E. Green, Mark Akeson, Adam M. Phillippy, Karen H. Miga, P. Carnevali, Miten Jain, Benedict Paten - Nature Biotechnology 2020 cited by 654
- Evolutionary constraint and innovation across hundreds of placental mammals
Authors: Matthew J. Christmas, Irene M. Kaplow, Diane P. Genereux, Michael X. Dong, Graham M. Hughes, Xue Li, Patrick F. Sullivan, Allyson G. Hindle, Gregory Andrews, Joel C. Armstrong, Matteo Bianchi, Ana M. Breit, Mark Diekhans, Cornelia Fanter, Nicole M. Foley, Daniel B. Goodman, Linda Goodman, Kathleen C. Keough, Bogdan Kirilenko, Amanda Kowalczyk, Colleen Lawless, Abigail Lind, Jennifer R. S. Meadows, Lucas R. Moreira, Ruby Redlich, Louise Ryan, Ross Swofford, Alejandro Valenzuela, Franziska Wagner, Ola Wallerman, Ashley R. Brown, Joana Damas, Kaili Fan, John Gatesy, Jenna Grimshaw, Jeremy Johnson, Sergey V. Kozyrev, Alyssa J. Lawler, Voichita D. Marinescu, Kathleen M. Morrill, Austin Osmanski, Nicole S. Paulat, BaDoi N. Phan, Steven K. Reilly, Daniel E. Schäffer, Cynthia Steiner, Megan A. Supple, Aryn P. Wilder, Morgan Wirthlin, James R. Xue, Susan J. Birren, Steven Gazal, Robert M. Hubley, Klaus-Peter Koepfli, Tomàs Marquès‐Bonet, Wynn K. Meyer, Martin Nweeia, Pardis C. Sabeti, Beth Shapiro, Arian F. A. Smit, Mark S. Springer, Emma C. Teeling, Zhiping Weng, Michael Hiller, Danielle L. Levesque, Harris A. Lewin, William J. Murphy, Arcadi Navarro, Benedict Paten, Katherine S. Pollard, David A. Ray, Irina Ruf, Oliver A. Ryder, Andreas R. Pfenning, Kerstin Lindblad‐Toh, Elinor K. Karlsson, Gregory Andrews, Joel C. Armstrong, Matteo Bianchi, Susan J. Birren, Kevin R. Bredemeyer, Ana M. Breit, Matthew J. Christmas, Hiram Clawson, Joana Damas, Federica Di Palma, Mark Diekhans, Michael X. Dong, Eduardo Eizirik, Kaili Fan, Cornelia Fanter, Nicole M. Foley, Karin Forsberg‐Nilsson, Carlos J. Garcia, John Gatesy, Steven Gazal, Diane P. Genereux, Linda Goodman, Jenna Grimshaw, Michaela K. Halsey and 79 more - Science 2023 cited by 268
- Haplotype-aware variant calling with PEPPER-Margin-DeepVariant enables high accuracy in nanopore long-reads
Authors: Kishwar Shafin, Trevor Pesout, Pi-Chuan Chang, Maria Nattestad, Alexey Kolesnikov, Sidharth Goel, Gunjan Baid, Mikhail Kolmogorov, Jordan M. Eizenga, Karen H. Miga, P. Carnevali, Miten Jain, Andrew Carroll, Benedict Paten - Nature Methods 2021 cited by 325
- DP-CGAN: Differentially Private Synthetic Data and Label Generation
Authors: Reihaneh Torkzadehmahani, Peter Kairouz, Benedict Paten - IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops (CVPRW), CVPR Workshops 2019 cited by 197
- Telomere-to-telomere assembly of a complete human X chromosome
Authors: Karen H. Miga, Sergey Koren, Arang Rhie, Mitchell R. Vollger, Ariel Gershman, Andrey V. Bzikadze, Shelise Brooks, Edmund Howe, David Porubskỳ, Glennis A. Logsdon, Valérie Schneider, Tamara Potapova, Jonathan Wood, William Chow, Joel Armstrong, Jeanne Fredrickson, Evgenia Pak, Kristof Tigyi, Milinn Kremitzki, Christopher Markovic, Valerie V. Maduro, Amalia Dutra, Gerard G. Bouffard, Alexander M. Chang, Nancy F. Hansen, Amy B. Wilfert, Françoise Thibaud‐Nissen, Anthony D. Schmitt, Jon-Matthew Belton, Siddarth Selvaraj, Megan Y. Dennis, Daniela C. Soto, Ruta Sahasrabudhe, Gulhan Kaya, Josh Quick, Nicholas J. Loman, Nadine Holmes, Matthew Loose, Urvashi Surti, Rosa Ana Risques, Tina Lindsay, Robert S. Fulton, Ira M. Hall, Benedict Paten, Kerstin Howe, Winston Timp, Alice Young, James C. Mullikin, Pavel A. Pevzner, Jennifer L. Gerton, Beth A. Sullivan, Evan E. Eichler, Adam M. Phillippy - Nature 2020 cited by 840
- A comparative genomics multitool for scientific discovery and conservation
Authors: Diane P. Genereux, Aitor Serres, Joel Armstrong, Jeremy Johnson, Voichita D. Marinescu, Eva Murén, David Juan, Gill Bejerano, Nicholas R. Casewell, Leona G. Chemnick, Joana Damas, Federica Di Palma, Mark Diekhans, Ian T. Fiddes, Manuel Garber, Vadim N. Gladyshev, Linda Goodman, Wilfried Haerty, Marlys L. Houck, Robert Hubley, Teemu Kivioja, Klaus-Peter Koepfli, Lukas F. K. Kuderna, Eric S. Lander, Jennifer R. S. Meadows, William J. Murphy, Will Nash, Hyun Ji Noh, Martin Nweeia, Andreas R. Pfenning, Katherine S. Pollard, David A. Ray, Beth Shapiro, Arian F. A. Smit, Mark S. Springer, Cynthia C. Steiner, Ross Swofford, Jussi Taipale, Emma C. Teeling, Jason Turner-Maier, Jessica Alfoldi, Bruce Birren, Oliver A. Ryder, Harris A. Lewin, Benedict Paten, Tomas Marques-Bonet, Kerstin Lindblad-Toh, Elinor K. Karlsson - Nature 2020 cited by 444
- Ultrarapid Nanopore Genome Sequencing in a Critical Care Setting
Authors: John E. Gorzynski, Sneha D. Goenka, Kishwar Shafin, Tanner Jensen, Dianna G. Fisk, Megan E. Grove, Elizabeth Spiteri, Trevor Pesout, Jean Monlong, Gunjan Baid, Jonathan A. Bernstein, Scott R. Ceresnak, Pi-Chuan Chang, Jeffrey W. Christle, Henry Chubb, Karen Dalton, Kyla Dunn, Daniel R. Garalde, Joseph Guillory, Joshua W. Knowles, Alexey Kolesnikov, Michael Ma, Tia Moscarello, Maria Nattestad, Marco Pérez, Maura Ruzhnikov, Mehrzad Samadi, Ankit Setia, Chris Wright, Courtney J. Wusthoff, Katherine Xiong, Tong Zhu, Miten Jain, Fritz J. Sedlazeck, Andrew Carroll, Benedict Paten, Euan A. Ashley - New England Journal of Medicine 2022 cited by 219
- Integrating gene annotation with orthology inference at scale
Authors: Bogdan Kirilenko, Chetan Munegowda, Ekaterina Osipova, David Jebb, Virag Sharma, Moritz Blumer, Ariadna E. Morales, Alexis-Walid Ahmed, Dimitrios ‐ Georgios Kontopoulos, Leon Hilgers, Kerstin Lindblad‐Toh, Elinor K. Karlsson, Michael Hiller, Gregory Andrews, Joel Armstrong, Matteo Bianchi, Bruce W. Birren, Kevin R. Bredemeyer, Ana M. Breit, Matthew J. Christmas, Hiram Clawson, Joana Damas, Federica Di Palma, Mark Diekhans, Michael X. Dong, Eduardo Eizirik, Kaili Fan, Cornelia Fanter, Nicole M. Foley, Karin Forsberg‐Nilsson, Carlos J. Garcia, John Gatesy, Steven Gazal, Diane P. Genereux, Linda Goodman, Jenna Grimshaw, Michaela K. Halsey, Andrew J. Harris, Glenn Hickey, Michael Hiller, Allyson G. Hindle, Robert Hubley, Graham M. Hughes, Jeremy Johnson, David Juan, Irene M. Kaplow, Elinor K. Karlsson, Kathleen C. Keough, Bogdan Kirilenko, Klaus‐Peter Koepfli, Jennifer M. Korstian, Amanda Kowalczyk, Sergey V. Kozyrev, Alyssa J. Lawler, Colleen Lawless, Thomas Lehmann, Danielle L. Levesque, Harris A. Lewin, Xue Li, Abigail Lind, Kerstin Lindblad‐Toh, Ava Mackay-Smith, Voichita D. Marinescu, Tomàs Marquès‐Bonet, Victor C. Mason, Jennifer R. S. Meadows, Wynn K. Meyer, Jill E. Moore, Lucas R. Moreira, Diana D. Moreno-Santillán, Kathleen M. Morrill, Gerard Muntané, William J. Murphy, Arcadi Navarro, Martin Nweeia, Sylvia Ortmann, Austin Osmanski, Benedict Paten, Nicole S. Paulat, Andreas R. Pfenning, BaDoi N. Phan, Katherine S. Pollard, Henry Pratt, David A. Ray, Steven K. Reilly, Jeb Rosen, Irina Ruf, Louise Ryan, Oliver A. Ryder, Pardis C. Sabeti, Daniel E. Schäffer, Aitor Serres, Beth Shapiro, Arian F. A. Smit, Mark S. Springer, Chaitanya Srinivasan, Cynthia Steiner, Jessica M. Storer, Kevin A. Sullivan, Patrick F. Sullivan and 16 more - Science 2023 cited by 204
