Julien Lagarde

Active 2004–2025

77
Papers
30,972
Citations
39
h-index
60
i10-index

Citations

Citations per year for Julien Lagarde1993: 1 citations1994: 1 citations1998: 1 citations1999: 1 citations2000: 1 citations2003: 1 citations2004: 3 citations2005: 7 citations2006: 10 citations2007: 155 citations2008: 242 citations2009: 231 citations2010: 229 citations2011: 306 citations2012: 351 citations2013: 491 citations2014: 541 citations2015: 539 citations2016: 509 citations2017: 522 citations2018: 518 citations2019: 1,214 citations2020: 1,399 citations2021: 1,361 citations2022: 982 citations2023: 817 citations2024: 1,212 citations2025: 561 citations2026: 33 citations1995–1997: no citations, so these years are not shown2001–2002: no citations, so these years are not shown

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 4,717 citing papers, 26.9% of this breakdownChina: 2,629 citing papers, 15% of this breakdownUnited Kingdom: 1,260 citing papers, 7.2% of this breakdownGermany: 1,016 citing papers, 5.8% of this breakdownItaly: 584 citing papers, 3.3% of this breakdownFrance: 572 citing papers, 3.2% of this breakdownCanada: 551 citing papers, 3.1% of this breakdownAustralia: 520 citing papers, 3% of this breakdownSpain: 504 citing papers, 2.9% of this breakdownJapan: 419 citing papers, 2.4% of this breakdownNetherlands: 370 citing papers, 2.1% of this breakdownSwitzerland: 365 citing papers, 2.1% of this breakdown
0%26.9%Other 23%

Fields

  • Biochemistry, Genetics and Molecular Biology73.7%
  • Medicine11.6%
  • Neuroscience4.9%
  • Immunology and Microbiology2.2%
  • Agricultural and Biological Sciences2.2%
  • Psychology2%
  • Other3.4%

Topics

  • Cancer-related molecular mechanisms research12.3%
  • RNA modifications and cancer9.3%
  • RNA Research and Splicing8.1%
  • Genomics and Chromatin Dynamics4%
  • RNA and protein synthesis mechanisms3.9%
  • Circular RNAs in diseases3.3%
  • Other59.1%

Coauthors

All papers

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  1. GENCODE reference annotation for the human and mouse genomes

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Paul Muir, Fabio C. P. Navarro, Anne Parker, Baikang Pei, Fernando Pozo, Magali Ruffier, Bianca M. Schmitt, Eloise Stapleton, Marie-Marthe Suner, Irina Sycheva, Barbara Uszczynska-Ratajczak, Jinrui Xu, Andrew D. Yates, Daniel R. Zerbino, Yan Zhang, Bronwen L. Aken, Jyoti Choudhary, Mark Gerstein, Roderic Guigó, Tim J. P. Hubbard, Manolis Kellis, Benedict Paten, Alexandre Reymond, Michael L. Tress, Paul Flicek - Nucleic Acids Research, Nucleic Acids Res. 2018 cited by 3,502

  2. GENCODE 2021

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Paul Muir, Fabio C. P. Navarro, Anne Parker, Baikang Pei, Fernando Pozo, Ferriol Calvet Riera, Magali Ruffier, Bianca M. Schmitt, Eloise Stapleton, Marie-Marthe Suner, Irina Sycheva, Barbara Uszczynska-Ratajczak, Maxim Y. Wolf, Jinrui Xu, Yucheng T. Yang, Andrew D. Yates, Daniel R. Zerbino, Yan Zhang, Jyoti Choudhary, Mark Gerstein, Roderic Guigó, Tim J. P. Hubbard, Manolis Kellis, Benedict Paten, Michael L. Tress, Paul Flicek - Nucleic Acids Research, Nucleic Acids Res. 2020 cited by 1,466

  3. Landscape of transcription in human cells

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Thomas Derrien, Jörg Drenkow, Erica Dumais, Jacqueline Dumais, Radha Duttagupta, Emilie Falconnet, Meagan Fastuca, Kata Fejes-Toth, Pedro G. Ferreira, Sylvain Foissac, Melissa J. Fullwood, Hui Gao, David González, Assaf Gordon, Harsha P. Gunawardena, Cédric Howald, Sonali Jha, Rory Johnson, Philipp Kapranov, Brandon King, Colin Kingswood, Oscar Junhong Luo, Eddie Park, Kimberly Persaud, Jonathan Preall, Paolo Ribeca, Brian A. Risk, Daniel Robyr, Michael Sammeth, Lorian Schaffer, Lei-Hoon See, Atif Shahab, Jørgen Skancke, Ana Maria Suzuki, Hazuki Takahashi, Hagen Tilgner, Diane Trout, Nathalie Walters, Huaien Wang, John A. Wrobel, Yanbao Yu, Xiaoan Ruan, Yoshihide Hayashizaki, Jennifer Harrow, Mark Gerstein, Tim Hubbard, Alexandre Reymond, Stylianos E. Antonarakis, Gregory J. Hannon, Morgan C. Giddings, Yijun Ruan, B Wold, Piero Carninci, Roderic Guigó, T Gingeras - Nature 2012 cited by 5,413

  4. The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , - Genome Research 2012 cited by 5,217

  5. GENCODE: reference annotation for the human and mouse genomes in 2023

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Benjamin James, Yunzhe Jiang, Rory Johnson, Mike P. Kay, Julien Lagarde, Fergal J. Martin, Laura Martínez Gómez, Surag Nair, Pengyu Ni, Fernando Pozo, Vivek Ramalingam, Magali Ruffier, Bianca M. Schmitt, Jacob M. Schreiber, Emily Steed, Marie-Marthe Suner, Dulika Sumathipala, Irina Sycheva, Barbara Uszczynska-Ratajczak, Elizabeth Wass, Yucheng T. Yang, Andrew D. Yates, Zahoor Zafrulla, Jyoti Choudhary, Mark Gerstein, Roderic Guigó, Tim J. P. Hubbard, Manolis Kellis, Anshul Kundaje, Benedict Paten, Michael L. Tress, Paul Flicek - Nucleic Acids Research, Nucleic Acids Res. 2022 cited by 648

  6. A comparative encyclopedia of DNA elements in the mouse genome

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Julien Lagarde, Giovanni Bussotti, Andrea Tanzer, Olgert Denas, Kanwei Li, M. A. Bender, Miaohua Zhang, Rachel Byron, Mark Groudine, David McCleary, Long Pham, Zhen Ye, Samantha Kuan, Lee Edsall, Yi-Chieh Wu, Matthew D. Rasmussen, Mukul S. Bansal, Manolis Kellis, Cheryl A. Keller, Christapher S. Morrissey, Tejaswini Mishra, Deepti Jain, Nergiz Doğan, Robert S. Harris, Philip Cayting, Trupti Kawli, Alan P. Boyle, Ghia Euskirchen, Anshul Kundaje, Shin Lin, Yiing Lin, Camden Jansen, Venkat S. Malladi, Melissa Cline, Drew T. Erickson, Vanessa M. Kirkup, Katrina Learned, Cricket A. Sloan, Kate R. Rosenbloom, Beatriz Lacerda de Sousa, Kathryn Beal, Miguel Pignatelli, Paul Flicek, Jin Lian, Tamer Kahveci, Dongwon Lee, W. James Kent, Miguel Ramalho Santos, Javier Herrero, Cédric Notredame, Audra Johnson, Shinny Vong, Kristen Lee, Daniel Bates, Fidencio Neri, Morgan Diegel, Theresa K. Canfield, Peter J. Sabo, Matthew S. Wilken, Thomas A. Reh, Erika Giste, Anthony Shafer, Tanya Kutyavin, Eric Haugen, Douglas Dunn, Alex Reynolds, Shane Neph, Richard Humbert, R. Scott Hansen, Marella de Bruijn and 37 more - Nature 2014 cited by 1,949

  7. Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Anindya Dutta, Ankit Malhotra, Neerja Karnani, Christopher M. Taylor, Roderic Guigó, Anindya Dutta, Patrick J. Boyle, Man Yu, Tyler Alioto, Josep F. Abril, Roderic Guigó, Eduardo Eyras, Núria López-Bigas, Philipp Kapranov, Josep F. Abril, Robert Castelo, Julien Lagarde, Jorg Drenkow, Eduardo Eyras, Srinka Ghosh, Evelyn J. Cheung, David A. Nix, Philipp Kapranov, Madhavan Ganesh, Ian Bell, Jill Cheng, Sylvain Foissac, Eric D. Green, Hari Tammana, Jörg Drenkow, T Gingeras, Valerie V.B. Maduro, Sujit Dike, T Gingeras, Yutao Fu, Ulaş Karaöz, Francis S. Collins, Valerie V. Maduro, Elliott H. Margulies, Eric D. Green, Hennady P. Shulha, Elliott H. Margulies, Jacquelyn R. Idol, Michael Snyder, Anason Halees, Xiaoling Zhang, Mousheng Xu, Ulaş Karaöz, Alexander E. Urban, Yutao Fu, Joel Rozowsky, Hennady P. Shulha, Yong Yu, Jaafar N. Haidar, Mark Gerstein, Jane M. Lin, Ghia Euskirchen, Jiaqian Wu, Ugrappa Nagalakshmi, M Snyder, Stephen E. Hartman, Peter R. Kraus, Pawandeep Dhami, Alexander E. Urban, Deyou Zheng, Joel Rozowsky, David Vetrie, Zhengdong D. Zhang, Ian Dunham, Michael Seringhaus and 212 more - Nature 2007 cited by 5,283

  8. Systematic assessment of long-read RNA-seq methods for transcript identification and quantification

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Joseph Lee, Jian‐Liang Li, Matthias Lienhard, Alla Mikheenko, Dennis Mulligan, Ka Ming Nip, Mihaela Pertea, Matthew E. Ritchie, Andre Sim, Alison D. Tang, Yuk Kei Wan, Changqing Wang, Brandon Wong, Chen Yang, If Barnes, Andrew Berry, Salvador Capella-Gutiérrez, Alyssa Cousineau, Namrita Dhillon, José M. Fernández, Luis Ferrández-Peral, Natàlia Garcia-Reyero, Stefan Götz, Carles Hernandéz-Ferrer, Liudmyla Kondratova, Tianyuan Liu, Alessandra Martinez-Martin, Carlos Menor, Jorge Mestre‐Tomás, Jonathan M. Mudge, Nedka G. Panayotova, Alejandro Paniagua, Dmitry Repchevsky, Xingjie Ren, Eric C. Rouchka, Brandon Saint-John, Enrique Sapena, Leon Sheynkman, Melissa Smith, Marie‐Marthe Suner, Hazuki Takahashi, Ingrid Youngworth, Piero Carninci, Nancy D. Denslow, Roderic Guigó, Margaret E. Hunter, René Maehr, Yin Shen, Hagen Tilgner, B Wold, Christopher Vollmers, Adam Frankish, Kin Fai Au, Gloria Sheynkman, A Mortazavi, Ana Conesa, Angela N. Brooks, Angela N. Brooks, Angela N. Brooks - Nature Methods 2024 cited by 208

  9. Early and protective microglial activation in Alzheimer’s disease: a prospective study using18F-DPA-714 PET imaging

    Authors: , , , , , , , , , , , , , , , - Brain 2016 cited by 525

  10. Towards a complete map of the human long non-coding RNA transcriptome

    Authors: , , , , - Nature Reviews Genetics 2018 cited by 650

  11. Distinct dynamic profiles of microglial activation are associated with progression of Alzheimer's disease

    Authors: , , , , , , , , , , , - Brain 2018 cited by 175

  12. Neutrophil hyperactivation correlates with Alzheimer's disease progression

    Authors: , , , , , , , , , , , , - Annals of Neurology 2018 cited by 184

  13. Current challenges and best practices for cell-free long RNA biomarker discovery

    Authors: , , , , - Biomarker Research 2022 cited by 87

  14. The phi complex as a neuromarker of human social coordination

    Authors: , , , - National Academy of Sciences, Proceedings of the National Academy of Sciences 2007 cited by 436

  15. GENCODE: producing a reference annotation for ENCODE

    Authors: , , , , , , , , , , , , , , - Genome biology 2006 cited by 649

  16. Increased microglial activation in patients with Parkinson disease using [18F]-DPA714 TSPO PET imaging

    Authors: , , , , , , , , , , , , , - Parkinsonism & Related Disorders 2020 cited by 132

  17. High-throughput annotation of full-length long noncoding RNAs with capture long-read sequencing

    Authors: , , , , , , , , , , - Nature Genetics 2017 cited by 292

  18. Tau-PET imaging predicts cognitive decline and brain atrophy progression in early Alzheimer’s disease

    Authors: , , , , , , , , , - Journal of Neurology Neurosurgery & Psychiatry 2022 cited by 62

  19. Social coordination dynamics: Measuring human bonding

    Authors: , , , , - Social Neuroscience 2008 cited by 397

  20. Systematic assessment of long-read RNA-seq methods for transcript identification and quantification

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Christopher Vollmers, Gloria Sheynkman, Adam Frankish, Kin Fai Au, Ana Conesa, A Mortazavi, Angela N. Brooks - 2021 cited by 54

  21. RATTLE: reference-free reconstruction and quantification of transcriptomes from Nanopore sequencing

    Authors: , , , , , , , - Genome biology 2022 cited by 53

  22. Systematic assessment of long-read RNA-seq methods for transcript identification and quantification

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Hideya Kawaji, Joseph Lee, Jian‐Liang Li, Matthias Lienhard, Alla Mikheenko, Dennis Mulligan, Ka Ming Nip, Mihaela Pertea, Matthew E. Ritchie, Andre Sim, Alison D. Tang, Yuk Kei Wan, Changqing Wang, Brandon Wong, Chen Yang, If Barnes, Andrew Berry, Salvador Capella-Gutiérrez, Namrita Dhillon, Jose M. Fernandez-Gonzalez, Luis Ferrández-Peral, Natàlia García‐Reyero, Stefan Goetz, Carles Hernandéz-Ferrer, Liudmyla Kondratova, Tianyuan Liu, Alessandra Martinez-Martin, Carlos Menor, Jorge Mestre‐Tomás, Jonathan M. Mudge, Nedka G. Panayotova, Alejandro Paniagua, Dmitry Repchevsky, Eric C. Rouchka, Brandon Saint-John, Enrique Sapena, Leon Sheynkman, Melissa Smith, Marie‐Marthe Suner, Hazuki Takahashi, Ingrid Youngworth, Piero Carninci, Nancy D. Denslow, Roderic Guigó, Margaret E. Hunter, Hagen Tilgner, B Wold, Christopher Vollmers, Adam Frankish, Kin Fai Au, Gloria Sheynkman, A Mortazavi, Ana Conesa, Angela N. Brooks, Angela N. Brooks - 2023 cited by 28

  23. CapTrap-seq: a platform-agnostic and quantitative approach for high-fidelity full-length RNA sequencing

    Authors: , , , , , , , , , - Nature Communications 2024 cited by 25

  24. On the use of sample entropy to analyze human postural sway data

    Authors: , , , , - Medical Engineering & Physics 2009 cited by 291