Ashwin N. Ananthakrishnan
Active 2006–2025
- 241
- Papers
- 40,684
- Citations
- 100
- h-index
- 225
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology55.2%
- Medicine28.1%
- Immunology and Microbiology6.3%
- Nursing1.7%
- Computer Science1.7%
- Neuroscience1.5%
- Other5.5%
Topics
- Inflammatory Bowel Disease12.4%
- Gut microbiota and health10.1%
- Microscopic Colitis4.6%
- Clostridium difficile and Clostridium perfringens research3.9%
- Gastrointestinal motility and disorders2.5%
- Helicobacter pylori-related gastroenterology studies1.8%
- Other64.7%
Coauthors
- Hamed Khalili44
- Andrew T. Chan29
- James M. Richter24
- Ramnik J. Xavier24
- Tianxi Cai22
- Bharati Kochar19
- Vivian S. Gainer18
- Isaac S. Kohane17
- Kristin E. Burke17
- Shawn N. Murphy17
- Katherine P. Liao16
- Paul Lochhead16
- Siddharth Singh15
- Peter Szolovits14
- Elizabeth W. Karlson13
- Stanley Y. Shaw13
- Susanne Churchill13
- Vijay Yajnik13
- Gilaad G. Kaplan12
- Jean‐Frédéric Colombel12
- Leslie M. Higuchi12
- Manasi Agrawal12
- Nienke Z. Borren12
- Andrew Cagan11
All papers
- Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases
Authors: Jason Lloyd‐Price, Cesar Arze, Ashwin N. Ananthakrishnan, Melanie Schirmer, Julián Ávila-Pacheco, Tiffany Poon, Elizabeth Andrews, Nadim J. Ajami, Kevin S. Bonham, Colin Brislawn, David Casero, Holly Courtney, Antonio González, Thomas G. Graeber, A. Brantley Hall, Kathleen D. Lake, Carol J. Landers, Himel Mallick, Damian R. Plichta, Mahadev Prasad, Ali Rahnavard, Jenny Sauk, Dmitry Shungin, Yoshiki Vázquez‐Baeza, Richard White, IBDMDB Investigators, Jason Bishai, Kevin Bullock, Amy Deik, Courtney Dennis, Jess L. Kaplan, Hamed Khalili, Lauren J. McIver, Christopher J. Moran, Long Nguyen, Kerry A. Pierce, Randall Schwager, Alexandra Sirota-Madi, Betsy W. Stevens, William Tan, Johanna J. ten Hoeve, George Weingart, Robin G. Wilson, Vijay Yajnik, Jonathan Braun, Lee A. Denson, Janet K. Jansson, Rob Knight, Subra Kugathasan, Dermot P. B. McGovern, Joseph F. Petrosino, Thaddeus S. Stappenbeck, Harland S. Winter, Clary B. Clish, Eric A. Franzosa, Hera Vlamakis, Ramnik J. Xavier, Curtis Huttenhower - Nature 2019 cited by 3,271
- Intra- and Inter-cellular Rewiring of the Human Colon during Ulcerative Colitis
Authors: Christopher S. Smillie, Moshe Biton, José Ordovás-Montañés, Keri M. Sullivan, Grace Burgin, Daniel B. Graham, Rebecca H. Herbst, Noga Rogel, Michal Slyper, Julia Waldman, Malika Sud, Elizabeth Andrews, Gabriella Velonias, Adam L. Haber, Karthik A. Jagadeesh, Sanja Vicković, Junmei Yao, Christine Stevens, Danielle Dionne, Lan Nguyễn, Alexandra–Chloé Villani, Matan Hofree, Elizabeth A. Creasey, Hailiang Huang, Orit Rozenblatt–Rosen, John J. Garber, Hamed Khalili, A. Nicole Desch, Mark J. Daly, Ashwin N. Ananthakrishnan, Alex K. Shalek, Ramnik J. Xavier, Aviv Regev - Cell 2019 cited by 1,510
- Host–microbe interactions have shaped the genetic architecture of inflammatory bowel disease
Authors: Luke Jostins, Stephan Ripke, Rinse K. Weersma, Richard H. Duerr, Dermot McGovern, Ken Hui, James Lee, L. Philip Schumm, Yashoda Sharma, Carl A. Anderson, Jonah Essers, Mitja Mitrovič, Kaida Ning, Isabelle Cleynen, Emilie Théâtre, Sarah L. Spain, Soumya Raychaudhuri, Philippe Goyette, Zhi Wei, Clara Abraham, Jean–Paul Achkar, Tariq Ahmad, Leila Amininejad, Ashwin N. Ananthakrishnan, Vibeke Andersen, Jane M. Andrews, Leonard Baidoo, Tobias Balschun, Peter A. Bampton, Alain Bitton, Gabrielle Boucher, Stephan Brand, Carsten Büning, Ariella Cohain, Sven Cichon, Mauro D’Amato, Dirk de Jong, Kathy L. Devaney, Marla C. Dubinsky, Cathryn Edwards, David Ellinghaus, Lynnette Ferguson, Denis Franchimont, Karin Fransén, Richard B. Gearry, Michel Georges, Christian Gieger, Jürgen Glas, Talin Haritunians, Ailsa Hart, Chris Hawkey, Matija Hedl, Xinli Hu, Tom H. Karlsen, Limas Kupčinskas, Subra Kugathasan, Anna Latiano, Debby Laukens, Ian C. Lawrance, Charlie W. Lees, Édouard Louis, Gillian Mahy, John Mansfield, Angharad R. Morgan, Craig Mowat, William G. Newman, Orazio Palmieri, Cyriel Y. Ponsioen, Uroš Potočnik, Natalie J. Prescott, Miguel Regueiro, Jerome I. Rotter, Richard K. Russell, Jeremy Sanderson, Miquel Sans, Jack Satsangi, Stefan Schreiber, Lisa A. Simms, Jurgita Šventoraitytė, Stephan R. Targan, Kent D. Taylor, Mark Tremelling, Hein W. Verspaget, Martine De Vos, Cisca Wijmenga, David C. Wilson, Juliane Winkelmann, Ramnik J. Xavier, Sebastian Zeißig, Bin Zhang, Hu Zhang, Hongyu Zhao, Mark S. Silverberg, Vito Annese, Håkon Håkonarson, Steven R. Brant, Graham Radford‐Smith, Christopher G. Mathew, John D. Rioux, Eric E. Schadt and 6 more - Nature 2012 cited by 4,917
- Epidemiology and risk factors for IBD
Authors: Ashwin N. Ananthakrishnan - Nature Reviews Gastroenterology & Hepatology 2015 cited by 1,725
- ACG Clinical Guideline: Ulcerative Colitis in Adults
Authors: David T. Rubin, Ashwin N. Ananthakrishnan, Corey A. Siegel, Bryan G. Sauer, Millie D. Long - The American Journal of Gastroenterology 2019 cited by 1,569
- A novel Ruminococcus gnavus clade enriched in inflammatory bowel disease patients
Authors: A. Brantley Hall, Moran Yassour, Jenny Sauk, Ashley Garner, Xiaofang Jiang, Timothy D. Arthur, Georgia Lagoudas, Tommi Vatanen, Nadine Fornelos, Robin Wilson, Madeline Bertha, Melissa Cohen, John J. Garber, Hamed Khalili, Dirk Gevers, Ashwin N. Ananthakrishnan, Subra Kugathasan, Eric S. Lander, Paul C. Blainey, Hera Vlamakis, Ramnik J. Xavier, Curtis Huttenhower - Genome Medicine 2017 cited by 783
- Depression and anxiety in inflammatory bowel disease: epidemiology, mechanisms and treatment
Authors: Tania Hviid Bisgaard, Kristine H. Allin, Laurie Keefer, Ashwin N. Ananthakrishnan, Tine Jess - Nature Reviews Gastroenterology & Hepatology 2022 cited by 533
- Environmental triggers in IBD: a review of progress and evidence
Authors: Ashwin N. Ananthakrishnan, Çharles N. Bernstein, Dimitrios Iliopoulos, Andrew J. Macpherson, Markus F. Neurath, Raja Affendi Raja Ali, Stephan R. Vavricka, Claudio Fiocchi - Nature Reviews Gastroenterology & Hepatology 2017 cited by 936
- Multi-omics reveal microbial determinants impacting responses to biologic therapies in inflammatory bowel disease
Authors: Jonathan Lee, Damian R. Plichta, Larson Hogstrom, Nienke Z. Borren, Helena Lau, Sara Gregory, William Tan, Hamed Khalili, Clary B. Clish, Hera Vlamakis, Ramnik J. Xavier, Ashwin N. Ananthakrishnan - Cell Host & Microbe 2021 cited by 216
- Reverse metabolomics for the discovery of chemical structures from humans
Authors: Emily C. Gentry, Stephanie L. Collins, Morgan Panitchpakdi, Pedro Belda‐Ferre, Allison K. Stewart, Marvic Carrillo Terrazas, Hsueh-Han Lu, Simone Zuffa, Tingting Yan, Julián Ávila-Pacheco, Damian R. Plichta, Allegra T. Aron, Mingxun Wang, Alan K. Jarmusch, Fuhua Hao, Mashette Syrkin-Nikolau, Hera Vlamakis, Ashwin N. Ananthakrishnan, Brigid S. Boland, Amy Hemperly, Niels Vande Casteele, Frank J. Gonzalez, Clary B. Clish, Ramnik J. Xavier, Hiutung Chu, Erin Baker, Andrew D. Patterson, Rob Knight, Dionicio Siegel, Pieter C. Dorrestein - Nature 2023 cited by 167
- Dynamics of metatranscription in the inflammatory bowel disease gut microbiome
Authors: Melanie Schirmer, Eric A. Franzosa, Jason Lloyd‐Price, Lauren J. McIver, Randall Schwager, Tiffany Poon, Ashwin N. Ananthakrishnan, Elizabeth Andrews, Gildardo Barron, Kathleen D. Lake, Mahadev Prasad, Jenny Sauk, Betsy W. Stevens, Robin Wilson, Jonathan Braun, Lee A. Denson, Subra Kugathasan, Dermot McGovern, Hera Vlamakis, Ramnik J. Xavier, Curtis Huttenhower - Nature Microbiology 2017 cited by 621
- The landscape of immune dysregulation in Crohn’s disease revealed through single-cell transcriptomic profiling in the ileum and colon
Authors: Lingjia Kong, Vladislav Pokatayev, Ariel Lefkovith, Grace T. Carter, Elizabeth A. Creasey, Chirag Krishna, Sathish Subramanian, Bharati Kochar, Orr Ashenberg, Helena Lau, Ashwin N. Ananthakrishnan, Daniel B. Graham, Jacques Deguine, Ramnik J. Xavier - Immunity 2023 cited by 263
- Gut Microbiome Function Predicts Response to Anti-integrin Biologic Therapy in Inflammatory Bowel Diseases
Authors: Ashwin N. Ananthakrishnan, Chengwei Luo, Vijay Yajnik, Hamed Khalili, John J. Garber, Betsy W. Stevens, Thomas A. Cleland, Ramnik J. Xavier - Cell Host & Microbe 2017 cited by 455
- Gut microbial metabolism of 5-ASA diminishes its clinical efficacy in inflammatory bowel disease
Authors: Raaj S. Mehta, Jared R. Mayers, Yancong Zhang, Amrisha Bhosle, Nathaniel R. Glasser, Long H. Nguyen, Wenjie Ma, Sena Bae, Tobyn Branck, Kijun Song, Luke Sebastian, Julián Ávila-Pacheco, Hyuk‐Soo Seo, Clary B. Clish, Sirano Dhe‐Paganon, Ashwin N. Ananthakrishnan, Eric A. Franzosa, Emily P. Balskus, Andrew T. Chan, Curtis Huttenhower - Nature Medicine 2023 cited by 155
- Changing Global Epidemiology of Inflammatory Bowel Diseases: Sustaining Health Care Delivery Into the 21st Century
Authors: Ashwin N. Ananthakrishnan, Gilaad G. Kaplan, Siew C. Ng - Clinical Gastroenterology and Hepatology 2020 cited by 270
- A Prospective Study of Long-term Intake of Dietary Fiber and Risk of Crohn's Disease and Ulcerative Colitis
Authors: Ashwin N. Ananthakrishnan, Hamed Khalili, Gauree G. Konijeti, Leslie M. Higuchi, Punyanganie S. de Silva, Joshua R. Korzenik, Charles S. Fuchs, Walter C. Willett, James M. Richter, Andrew T. Chan - Gastroenterology 2013 cited by 631
- Large-scale sequencing identifies multiple genes and rare variants associated with Crohn’s disease susceptibility
Authors: Aleksejs Sazonovs, Christine Stevens, Guhan Venkataraman, Kai Yuan, Brandon E. Avila, Maria T. Abreu, Tariq Ahmad, Matthieu Allez, Ashwin N. Ananthakrishnan, Gil Atzmon, Aris Baras, Jeffrey C. Barrett, Nir Barzilai, Laurent Beaugerie, Ashley Beecham, Charles N. Bernstein, Alain Bitton, Bernd Bokemeyer, Andrew Chan, Daniel C. Chung, Isabelle Cleynen, Jacques Cosnes, David J. Cutler, Allan Daly, Oriana M. Damas, Lisa W. Datta, Noor Dawany, Marcella Devoto, Sheila Dodge, Eva Ellinghaus, Laura Fachal, Martti Färkkilâ, William A. Faubion, Manuel A. R. Ferreira, Denis Franchimont, Stacey Gabriel, Tian Ge, Michel Georges, Kyle Gettler, Mamta Giri, Benjamin Gläser, Siegfried Goerg, Philippe Goyette, Daniel B. Graham, Eija Hämäläinen, Talin Haritunians, Graham Heap, Mikko Hiltunen, Marc P. Hoeppner, Julie Horowitz, Peter M. Irving, Vivek Iyer, Chaim Jalas, Judith R. Kelsen, Hamed Khalili, Barbara S. Kirschner, Kimmo Kontula, Jukka Koskela, Subra Kugathasan, Juozas Kupčinskas, Christopher A Lamb, Matthias Laudes, Chloé Lévesque, Adam P. Levine, James D. Lewis, Claire Liefferinckx, Britt-Sabina Loescher, Édouard Louis, John Mansfield, Sandra May, Jacob L. McCauley, Emebet Mengesha, Myriam Mni, Paul Moayyedi, Christopher J. Moran, Rodney D. Newberry, Sirimon O’Charoen, David T. Okou, Bas Oldenburg, Harry Ostrer, Aarno Palotie, Jean Paquette, Joel Pekow, Inga Peter, Marieke Pierik, Cyriel Y. Ponsioen, Nikolas Pontikos, Natalie J. Prescott, Ann E. Pulver, Souad Rahmouni, Daniel L Rice, Päivi Saavalainen, Bruce E. Sands, R. Balfour Sartor, Elena Schiff, Stefan Schreiber, L. Philip Schumm, Anthony W. Segal, Philippe Seksik, Rasha Shawky and 33 more - Nature Genetics 2022 cited by 189
- Ultra-processed Foods and Risk of Crohn’s Disease and Ulcerative Colitis: A Prospective Cohort Study
Authors: Chun‐Han Lo, Neha Khandpur, Sinara Laurini Rossato, Paul Lochhead, Emily W. Lopes, Kristin E. Burke, James M. Richter, Mingyang Song, Andres V Ardisson Korat, Qi Sun, Teresa T. Fung, Hamed Khalili, Andrew T. Chan, Ashwin N. Ananthakrishnan - Clinical Gastroenterology and Hepatology 2021 cited by 159
- Lifestyle, behaviour, and environmental modification for the management of patients with inflammatory bowel diseases: an International Organization for Study of Inflammatory Bowel Diseases consensus
Authors: Ashwin N. Ananthakrishnan, Gilaad G. Kaplan, Çharles N. Bernstein, Kristin E. Burke, Paul Lochhead, Alexa N. Sasson, Manasi Agrawal, Ho Tuan Tiong, Joshua M. Steinberg, Wolfgang Kruis, Flávio Steinwurz, Vineet Ahuja, Siew C. Ng, David T. Rubin, Jean‐Frédéric Colombel, Richard B. Gearry, M Abreu, V Ahuja, M Allez, A Ananthakrishnan, W Bemelman, C Bernstein, J Braun, Y Chowers, J-F Colombel, S Danese, G D'Haens, A D'Hoore, A Dignass, I Dotan, M Dubinsky, A Ekbom, P Fleshner, C Gasche, MA Gassull, R Gearry, S Ghosh, P Gibson, A Griffiths, J Halfvarson, S Hanauer, N Harpaz, A Hart, T Hibi, M Kamm, G Kaplan, A Kaser, B Korelitz, P Kotze, I Koutroubakis, W Kruis, P Lakatos, J Lewis, J Lindsay, E Loftus, E Louis, M Lukas, F Magro, U Mahadevan, G Mantzaris, J-Y Mary, D McGovern, B Moum, P Munkholm, M Neurath, S Ng, C O'Morain, T Oresland, R Panaccione, J Panes, Y Panis, J Pemberton, L Peyrin-Biroulet, C Prantera, D Rachmilewitz, Z Ran, W Reinisch, F Remzi, J Rhodes, R Riddell, G Rogler, D Rubin, D Sachar, W Sandborn, B Sands, B Sartor, J Schoelmerich, S Schreiber, C Siegel, B Siegmund, M Silverberg, J Söderholm, A Sood, A Spinelli, E Stange, F Steinwurz, S Targan, S Travis, D Turner, C Tysk and 5 more - The Lancet. Gastroenterology & hepatology 2022 cited by 149
- Dietary Guidance From the International Organization for the Study of Inflammatory Bowel Diseases
Authors: Arie Levine, Jonathan M. Rhodes, James O. Lindsay, María T. Abreu, Michael A. Kamm, Peter R. Gibson, Christoph Gasché, Mark S. Silverberg, Uma Mahadevan, Rotem Sigall Boneh, Eyton Wine, Oriana M. Damas, Graeme Syme, Gina Trakman, Chu K Yao, Stefanie Stockhamer, Muhammad B. Hammami, Luis C. Garces, Gerhard Rogler, Ioannis E. Κoutroubakis, Ashwin N. Ananthakrishnan, Liam McKeever, James D. Lewis - Clinical Gastroenterology and Hepatology 2020 cited by 289
- Long-term intake of dietary fat and risk of ulcerative colitis and Crohn's disease
Authors: Ashwin N. Ananthakrishnan, Hamed Khalili, Gauree G. Konijeti, Leslie M. Higuchi, Punyanganie S. de Silva, Charles S. Fuchs, Walter C. Willett, James M. Richter, Andrew T. Chan - Gut 2013 cited by 514
- Fatigue in IBD: epidemiology, pathophysiology and management
Authors: Nienke Z. Borren, C. Janneke van der Woude, Ashwin N. Ananthakrishnan - Nature Reviews Gastroenterology & Hepatology 2018 cited by 270
- Food Processing and Risk of Inflammatory Bowel Disease: A Systematic Review and Meta-Analysis
Authors: Neeraj Narula, Nicole H. Chang, Danah Mohammad, Emily C L Wong, Ashwin N. Ananthakrishnan, Simon Chan, Franck Carbonnel, Antoine Meyer - Clinical Gastroenterology and Hepatology 2023 cited by 107
- Guidelines for Diagnosis, Treatment, and Prevention of Clostridium difficile Infections
Authors: Christina M. Surawicz, Lawrence J. Brandt, David G. Binion, Ashwin N. Ananthakrishnan, Scott Curry, Peter H. Gilligan, Lynne V. McFarland, Mark Mellow, Brian S. Zuckerbraun - The American Journal of Gastroenterology 2013 cited by 1,642
