litlas
Log inCreate account

James D. Lewis

Active 1997–2025

232
Papers
52,247
Citations
113
h-index
216
i10-index

Citations

Citations per year for James D. Lewis1973: 1 citations1976: 1 citations1986: 1 citations1989: 1 citations1991: 3 citations1993: 1 citations1996: 2 citations1998: 1 citations2000: 4 citations2001: 7 citations2002: 25 citations2003: 59 citations2004: 87 citations2005: 94 citations2006: 135 citations2007: 125 citations2008: 165 citations2009: 160 citations2010: 190 citations2011: 210 citations2012: 412 citations2013: 514 citations2014: 643 citations2015: 743 citations2016: 792 citations2017: 895 citations2018: 913 citations2019: 2,137 citations2020: 2,330 citations2021: 2,425 citations2022: 1,980 citations2023: 1,356 citations2024: 2,042 citations2025: 1,076 citations2026: 23 citations1974–1975: no citations, so these years are not shown1977–1985: no citations, so these years are not shown1987–1988: no citations, so these years are not shown1990: no citations, so this year is not shown1992: no citations, so this year is not shown1994–1995: no citations, so these years are not shown1997: no citations, so this year is not shown1999: no citations, so this year is not shown

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 6,689 citing papers, 24.7% of this breakdownChina: 2,797 citing papers, 10.3% of this breakdownUnited Kingdom: 1,837 citing papers, 6.8% of this breakdownCanada: 1,241 citing papers, 4.6% of this breakdownItaly: 1,180 citing papers, 4.3% of this breakdownGermany: 1,160 citing papers, 4.3% of this breakdownFrance: 1,034 citing papers, 3.8% of this breakdownSpain: 856 citing papers, 3.2% of this breakdownNetherlands: 798 citing papers, 2.9% of this breakdownAustralia: 765 citing papers, 2.8% of this breakdownJapan: 552 citing papers, 2% of this breakdownDenmark: 491 citing papers, 1.8% of this breakdown
0%24.7%Other 28.5%

Institutions

Fields

  • Biochemistry, Genetics and Molecular Biology52.1%
  • Medicine31.6%
  • Environmental Science4.2%
  • Immunology and Microbiology3.2%
  • Agricultural and Biological Sciences2.1%
  • Nursing1.7%
  • Other5.1%

Topics

  • Gut microbiota and health14.9%
  • Inflammatory Bowel Disease5.9%
  • Diet and metabolism studies4.5%
  • Clostridium difficile and Clostridium perfringens research3.7%
  • Microscopic Colitis2.2%
  • Probiotics and Fermented Foods2.1%
  • Other66.7%

Coauthors

All papers

Open in search
  1. Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes

    Authors: Gary D. Wu, Jun Chen, Christian Hoffmann, Kyle Bittinger, Ying-Yu Chen, Sue A. Keilbaugh, Meenakshi Bewtra, Dan Knights, William A. Walters, Rob Knight, Rohini Sinha, Erin Gilroy, Kernika Gupta, Robert N. Baldassano, Lisa Nessel, Hongzhe Li, Frederic D. Bushman, James D. Lewis - Science 2011 cited by 6,645

  2. Intestinal microbiota metabolism of l-carnitine, a nutrient in red meat, promotes atherosclerosis

    Authors: Robert Koeth, Zeneng Wang, Bruce S. Levison, Jennifer A. Buffa, Elin Org, Brendan Sheehy, Earl B. Britt, Xiaoming Fu, Yuping Wu, Lin Li, Jonathan D. Smith, Joseph A. DiDonato, Jun Chen, Hongzhe Li, Gary D. Wu, James D. Lewis, Manya Warrier, J. Mark Brown, Ronald M. Krauss, W.H. Wilson Tang, Frederic D. Bushman, Aldons J. Lusis, Stanley L. Hazen - Nature Medicine 2013 cited by 4,361

  3. Enterotypes in the landscape of gut microbial community composition

    Authors: Paul Igor Costea, Falk Hildebrand, Manimozhiyan Arumugam, Fredrik Bäckhed, Martin J. Blaser, Frederic D. Bushman, Willem M. de Vos, S. Dusko Ehrlich, Claire M. Fraser, Masahira Hattori, Curtis Huttenhower, Ian B. Jeffery, Dan Knights, James D. Lewis, Ruth E. Ley, Howard Ochman, Paul W. O’Toole, Christopher Quince, David A. Relman, Fergus Shanahan, Shinichi Sunagawa, Jun Wang, George M. Weinstock, Gary D. Wu, Georg Zeller, Liping Zhao, Jeroen Raes, Rob Knight, Peer Bork - Nature Microbiology 2017 cited by 1,228

  4. American Gut: an Open Platform for Citizen Science Microbiome Research

    Authors: Daniel McDonald, Embriette R. Hyde, Justine W. Debelius, James T. Morton, Antonio González-Torres, Gail Ackermann, Alexander A. Aksenov, Bahar Behsaz, Caitriona Brennan, Yingfeng Chen, Lindsay DeRight Goldasich, Pieter C. Dorrestein, Robert R. Dunn, Ashkaan K. Fahimipour, James Gaffney, Jack A. Gilbert, Grant Gogul, Jessica L. Green, Philip Hugenholtz, Greg Humphrey, Curtis Huttenhower, Matthew Jackson, Stefan Janssen, Dilip V. Jeste, Lingjing Jiang, Scott T. Kelley, Dan Knights, Tomasz Kościółek, Joshua Ladau, Jeff Leach, Clarisse Marotz, Dmitry Meleshko, Alexey V. Melnik, Jessica L. Metcalf, Hosein Mohimani, Emmanuel Montassier, José A. Navas-Molina, Tanya T. Nguyen, Shyamal D. Peddada, Pavel A. Pevzner, Katherine S. Pollard, Ali Rahnavard, Adam Robbins‐Pianka, Naseer Sangwan, Joshua Shorenstein, Larry Smarr, Se Jin Song, Timothy Spector, Austin D. Swafford, Varykina G. Thackray, Luke Thompson, Anupriya Tripathi, Yoshiki Vázquez‐Baeza, Alison Vrbanac, Paul E. Wischmeyer, Elaine Wolfe, Qiyun Zhu, Rob Knight, Allison E. Mann, Amnon Amir, Angel Frazier, Cameron Martino, Carlito B. Lebrilla, Catherine Lozupone, Cecil M. Lewis, Charles L. Raison, Chi Zhang, Christian L. Lauber, Christina Warinner, Christopher A. Lowry, Chris Callewaert, Cinnamon S. Bloss, Dana Willner, Daniela Domingos Galzerani, David J. Gonzalez, David A. Mills, Deepak Chopra, Dirk Gevers, Donna Berg-Lyons, Dorothy D. Sears, Doug Wendel, Elijah Lovelace, Emily C. Pierce, Emily TerAvest, Evan Bolyen, Frederic D. Bushman, Gary D. Wu, George M. Church, Gordon Saxe, Hanna D. Holscher, Ivo Ugrina, J German, J. Gregory Caporaso, Jacob M. Wozniak, Jacqueline Kerr, Jacques Ravel, James D. Lewis, Jan S. Suchodolski, Janet Jansson, Jarrad Hampton‐Marcell and 68 more - mSystems 2018 cited by 906

  5. Incidence, Prevalence, and Racial and Ethnic Distribution of Inflammatory Bowel Disease in the United States

    Authors: James D. Lewis, Lauren E. Parlett, Michele L. Jonsson Funk, Colleen Brensinger, Virginia Pate, Qufei Wu, Ghadeer K. Dawwas, Alexandra Weiss, Brad D. Constant, Maureen McCauley, Kevin Haynes, Jeff Y. Yang, Douglas E. Schaubel, Andres Hurtado‐Lorenzo, Michael D. Kappelman - Gastroenterology 2023 cited by 337

  6. Randomized Controlled-Feeding Study of Dietary Emulsifier Carboxymethylcellulose Reveals Detrimental Impacts on the Gut Microbiota and Metabolome

    Authors: Benoît Chassaing, Charlene Compher, Brittaney Bonhomme, Qing Liu, Yuan Tian, William A. Walters, Lisa Nessel, Clara Delaroque, Fuhua Hao, Victoria M. Gershuni, Lillian Chau, Josephine Ni, Meenakshi Bewtra, Lindsey Albenberg, Alexis Bretin, Liam McKeever, Ruth E. Ley, Andrew D. Patterson, Gary D. Wu, Andrew T. Gewirtz, James D. Lewis - Gastroenterology 2021 cited by 312

  7. Use of the noninvasive components of the mayo score to assess clinical response in Ulcerative Colitis

    Authors: James D. Lewis, Shaokun Chuai, Lisa Nessel, Gary R. Lichtenstein, Faten Aberra, Jonas H. Ellenberg - Inflammatory Bowel Diseases 2008 cited by 952

  8. Role of dietary fiber in the recovery of the human gut microbiome and its metabolome

    Authors: Ceylan Tanes, Kyle Bittinger, Yuan Gao, Elliot S. Friedman, Lisa Nessel, Unmesha Roy Paladhi, Lillian Chau, Erika Panfen, Michael A. Fischbach, Jonathan Braun, Ramnik J. Xavier, Clary B. Clish, Hongzhe Li, Frederic D. Bushman, James D. Lewis, Gary D. Wu - Cell Host & Microbe 2021 cited by 310

  9. Correlation Between Intraluminal Oxygen Gradient and Radial Partitioning of Intestinal Microbiota

    Authors: Lindsey Albenberg, Tatiana V. Esipova, Colleen Judge-Golden, Kyle Bittinger, Jun Chen, Alice Laughlin, Stephanie Grunberg, Robert N. Baldassano, James D. Lewis, Hongzhe Li, Stephen R. Thom, Frederic D. Bushman, Sergei A. Vinogradov, Gary D. Wu - Gastroenterology 2014 cited by 880

  10. Ustekinumab versus adalimumab for induction and maintenance therapy in biologic-naive patients with moderately to severely active Crohn's disease: a multicentre, randomised, double-blind, parallel-group, phase 3b trial

    Authors: Bruce E. Sands, Peter M. Irving, Timothy Hoops, James Izanec, Long-Long Gao, Christopher Gasink, Andrew Greenspan, Matthieu Allez, Silvio Danese, Stephen B. Hanauer, Vipul Jairath, Tanja Kuehbacher, James D. Lewis, Edward V. Loftus, Emese Mihály, Remo Panaccione, Ellen Scherl, О. Б. Щукина, William J. Sandborn, Anita Afzali, Lilia Aitova, Xavier Aldeguer i Mante, Matthieu Allez, I Altorjay, Federico Argüelles‐Arias, Alessandro Armuzzi, Monika Augustyn, Mauro Bafutto, Jésus Barrio, Jakob Begun, Clint Behrend, Geert Bezemer, Guillaume Bonnaud, Marija Branković, Ik Jang Byung, Xavier Calvet, Karen A. Chachu, Júlio Maria Fonseca Chebli, Jae Hee Cheon, Halina Cichoż‐Lach, Larry Clark, Fraser Cummings, Kunal Dalal, Silvio Danese, Nanne K.H. de Boer, Maria de Lourdes Abreu Ferrari, Étienne Désilets, Predrag Dugalić, George Duvall, Olga Fedorishina, Rafał Filip, Cristina Flores, Ronald Fogel, James Fon, Michael Frankel, Keith Friedenberg, Walter Fries, Vassileva Galina, Piotr Gietka, Rishi Goel, Peter Hasselblatt, Hans Herfarth, László Herszényi, Pieter Hindryckx, Frank Hoentjen, Carmen Horjus Talabur Horje, Satish Iduru, Peter M. Irving, Robert J. Isfort, Vipul Jairath, Michael Jones, Dilara Kalimullina, Jeffry Katz, Manreet Kaur, Sunil K Khurana, Joo Sung Kim, Young‐Ho Kim, D Kleczkowski, Slavko Knezevic, Aaron Knoll, Louis Y Korman, Iskren Kotzev, Andrey Kulyapin, Kang‐Moon Lee, Desirée Leemreis, Jarosław Leszczyszyn, Jimmy K. Limdi, Jack J. Lissauer, Edward V. Loftus, Ewa Małecka‐Panas, John K. Marshall, Emese Mihály, Lukáš Milan, Giovanni Monteleone, Aleksandar Nagorni, Danuta Owczarek, Nichole Palekar, Remo Panaccione, Young Soo Park, Sang Hyoung Park and 43 more - The Lancet 2022 cited by 297

  11. AGA Clinical Practice Update on Diet and Nutritional Therapies in Patients With Inflammatory Bowel Disease: Expert Review

    Authors: Jana G. Hashash, Jaclyn R. Elkins, James D. Lewis, David G. Binion - Gastroenterology 2024 cited by 269

  12. A Randomized Trial Comparing the Specific Carbohydrate Diet to a Mediterranean Diet in Adults With Crohn’s Disease

    Authors: James D. Lewis, Robert S. Sandler, Carol Brotherton, Colleen Brensinger, Hongzhe Li, Michael D. Kappelman, Scott G. Daniel, Kyle Bittinger, Lindsey Albenberg, John F. Valentine, John S. Hanson, David L. Suskind, Andrea H. Meyer, Charlene Compher, Meenakshi Bewtra, Akriti Saxena, Angela Dobes, Benjamin L. Cohen, Ann D. Flynn, Monika Fischer, Sumona Saha, Arun Swaminath, Bruce Yacyshyn, Ellen Scherl, Sara Horst, Jeffrey R. Curtis, Kimberly Braly, Lisa Nessel, Maureen McCauley, Liam McKeever, Hans Herfarth - Gastroenterology 2021 cited by 293

  13. Inflammation, Antibiotics, and Diet as Environmental Stressors of the Gut Microbiome in Pediatric Crohn’s Disease

    Authors: James D. Lewis, Eric Z. Chen, Robert N. Baldassano, Anthony Otley, Anne M. Griffiths, Dale Lee, Kyle Bittinger, Aubrey Bailey, Elliot S. Friedman, Christian Hoffmann, Lindsey Albenberg, Rohini Sinha, Charlene Compher, Erin Gilroy, Lisa Nessel, Amy Grant, Christel Chehoud, Hongzhe Li, Gary D. Wu, Frederic D. Bushman - Cell Host & Microbe 2015 cited by 843

  14. Archaea and Fungi of the Human Gut Microbiome: Correlations with Diet and Bacterial Residents

    Authors: Christian Hoffmann, Serena Dollive, Stephanie Grunberg, Jun Chen, Hongzhe Li, Gary D. Wu, James D. Lewis, Frederic D. Bushman - PLoS ONE 2013 cited by 810

  15. Efficacy and Safety of Upadacitinib in a Randomized Trial of Patients With Crohn’s Disease

    Authors: William J. Sandborn, Brian G. Feagan, Edward V. Loftus, Laurent Peyrin‐Biroulet, Gert Van Assche, Geert D’Haens, Stefan Schreiber, Jean‐Frédéric Colombel, James D. Lewis, Subrata Ghosh, Alessandro Armuzzi, Ellen Scherl, Hans Herfarth, L.M. Vitale, Mohamed‐Eslam F. Mohamed, Ahmed A. Othman, Qian Zhou, Bidan Huang, Roopal Thakkar, Aileen L. Pangan, Ana P. Lacerda, Julián Panés - Gastroenterology 2020 cited by 317

  16. Associating microbiome composition with environmental covariates using generalized UniFrac distances

    Authors: Jun Chen, Kyle Bittinger, Emily S. Charlson, Christian Hoffmann, James D. Lewis, Gary D. Wu, Ronald G. Collman, Frederic D. Bushman, Hongzhe Li - Bioinformatics, Bioinform. 2011 cited by 1,255

  17. Large-scale sequencing identifies multiple genes and rare variants associated with Crohn’s disease susceptibility

    Authors: Aleksejs Sazonovs, Christine Stevens, Guhan Venkataraman, Kai Yuan, Brandon E. Avila, Maria T. Abreu, Tariq Ahmad, Matthieu Allez, Ashwin N. Ananthakrishnan, Gil Atzmon, Aris Baras, Jeffrey C. Barrett, Nir Barzilai, Laurent Beaugerie, Ashley Beecham, Charles N. Bernstein, Alain Bitton, Bernd Bokemeyer, Andrew Chan, Daniel C. Chung, Isabelle Cleynen, Jacques Cosnes, David J. Cutler, Allan Daly, Oriana M. Damas, Lisa W. Datta, Noor Dawany, Marcella Devoto, Sheila Dodge, Eva Ellinghaus, Laura Fachal, Martti Färkkilâ, William A. Faubion, Manuel A. R. Ferreira, Denis Franchimont, Stacey Gabriel, Tian Ge, Michel Georges, Kyle Gettler, Mamta Giri, Benjamin Gläser, Siegfried Goerg, Philippe Goyette, Daniel B. Graham, Eija Hämäläinen, Talin Haritunians, Graham Heap, Mikko Hiltunen, Marc P. Hoeppner, Julie Horowitz, Peter M. Irving, Vivek Iyer, Chaim Jalas, Judith R. Kelsen, Hamed Khalili, Barbara S. Kirschner, Kimmo Kontula, Jukka Koskela, Subra Kugathasan, Juozas Kupčinskas, Christopher A Lamb, Matthias Laudes, Chloé Lévesque, Adam P. Levine, James D. Lewis, Claire Liefferinckx, Britt-Sabina Loescher, Édouard Louis, John Mansfield, Sandra May, Jacob L. McCauley, Emebet Mengesha, Myriam Mni, Paul Moayyedi, Christopher J. Moran, Rodney D. Newberry, Sirimon O’Charoen, David T. Okou, Bas Oldenburg, Harry Ostrer, Aarno Palotie, Jean Paquette, Joel Pekow, Inga Peter, Marieke Pierik, Cyriel Y. Ponsioen, Nikolas Pontikos, Natalie J. Prescott, Ann E. Pulver, Souad Rahmouni, Daniel L Rice, Päivi Saavalainen, Bruce E. Sands, R. Balfour Sartor, Elena Schiff, Stefan Schreiber, L. Philip Schumm, Anthony W. Segal, Philippe Seksik, Rasha Shawky and 33 more - Nature Genetics 2022 cited by 189

  18. The human gut virome: Inter-individual variation and dynamic response to diet

    Authors: Samuel S. Minot, Rohini Sinha, Jun Chen, Hongzhe Li, Sue A. Keilbaugh, Gary D. Wu, James D. Lewis, Frederic D. Bushman - Genome Research 2011 cited by 963

  19. Dietary Guidance From the International Organization for the Study of Inflammatory Bowel Diseases

    Authors: Arie Levine, Jonathan M. Rhodes, James O. Lindsay, María T. Abreu, Michael A. Kamm, Peter R. Gibson, Christoph Gasché, Mark S. Silverberg, Uma Mahadevan, Rotem Sigall Boneh, Eyton Wine, Oriana M. Damas, Graeme Syme, Gina Trakman, Chu K Yao, Stefanie Stockhamer, Muhammad B. Hammami, Luis C. Garces, Gerhard Rogler, Ioannis E. Κoutroubakis, Ashwin N. Ananthakrishnan, Liam McKeever, James D. Lewis - Clinical Gastroenterology and Hepatology 2020 cited by 289

  20. Fecal Microbiota Transplantation Is Highly Effective in Real-World Practice: Initial Results From the FMT National Registry

    Authors: Colleen Kelly, Eugene F. Yen, Ari Grinspan, Stacy A. Kahn, Ashish Atreja, James D. Lewis, Thomas A. Moore, David T. Rubin, Alison M. Kim, Sonya Serra, Yanina Nersesova, Lydia Fredell, Dea Hunsicker, Daniel McDonald, Rob Knight, Jessica R. Allegretti, Joel Pekow, Imad Absah, Ronald Hsu, Jennifer Vincent, Sahil Khanna, Lyn Tangen, Carl V. Crawford, Mark Mattar, Lea Ann Chen, Monika Fischer, Razvan Arsenescu, Paul Feuerstadt, Jonathan Goldstein, David H. Kerman, Adam C. Ehrlich, Gary D. Wu, Loren Laine - Gastroenterology 2020 cited by 207

  21. Rapid evolution of the human gut virome

    Authors: Samuel S. Minot, Alexandra Bryson, Christel Chehoud, Gary D. Wu, James D. Lewis, Frederic D. Bushman - National Academy of Sciences, Proceedings of the National Academy of Sciences 2013 cited by 632

  22. Diet as a Trigger or Therapy for Inflammatory Bowel Diseases

    Authors: James D. Lewis, María T. Abreu - Gastroenterology 2016 cited by 370

  23. Fungal Signature in the Gut Microbiota of Pediatric Patients With Inflammatory Bowel Disease

    Authors: Christel Chehoud, Lindsey Albenberg, Colleen Judge-Golden, Christian Hoffmann, Stephanie Grunberg, Kyle Bittinger, Robert N. Baldassano, James D. Lewis, Frederic D. Bushman, Gary D. Wu - Inflammatory Bowel Diseases 2015 cited by 257

  24. Power and sample-size estimation for microbiome studies using pairwise distances and PERMANOVA

    Authors: Brendan J. Kelly, Robert Gross, Kyle Bittinger, Scott A. Sherrill-Mix, James D. Lewis, Ronald G. Collman, Frederic D. Bushman, Hongzhe Li - Bioinformatics, Bioinform. 2015 cited by 460