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Lingjing Jiang

Active 2017–2025

34
Papers
33,898
Citations
27
h-index
34
i10-index

Citations

Citations per year for Lingjing Jiang1976: 1 citations1990: 2 citations1996: 1 citations2001: 2 citations2005: 1 citations2006: 1 citations2008: 1 citations2010: 1 citations2018: 74 citations2019: 481 citations2020: 1,218 citations2021: 1,836 citations2022: 1,718 citations2023: 1,368 citations2024: 2,128 citations2025: 898 citations2026: 25 citations1977–1989: no citations, so these years are not shown1991–1995: no citations, so these years are not shown1997–2000: no citations, so these years are not shown2002–2004: no citations, so these years are not shown2007: no citations, so this year is not shown2009: no citations, so this year is not shown2011–2017: no citations, so these years are not shown

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 3,150 citing papers, 21.6% of this breakdownChina: 2,323 citing papers, 15.9% of this breakdownGermany: 670 citing papers, 4.6% of this breakdownUnited Kingdom: 613 citing papers, 4.2% of this breakdownCanada: 558 citing papers, 3.8% of this breakdownItaly: 517 citing papers, 3.5% of this breakdownAustralia: 482 citing papers, 3.3% of this breakdownSpain: 430 citing papers, 2.9% of this breakdownJapan: 402 citing papers, 2.8% of this breakdownFrance: 392 citing papers, 2.7% of this breakdownSouth Korea: 325 citing papers, 2.2% of this breakdownNetherlands: 320 citing papers, 2.2% of this breakdown
0%21.6%Other 30.3%

Institutions

Fields

  • Biochemistry, Genetics and Molecular Biology45%
  • Environmental Science15.1%
  • Medicine14.8%
  • Agricultural and Biological Sciences12.3%
  • Immunology and Microbiology4.1%
  • Dentistry2.1%
  • Other6.6%

Topics

  • Gut microbiota and health19.6%
  • Microbial Community Ecology and Physiology5.1%
  • Clostridium difficile and Clostridium perfringens research3.2%
  • Genomics and Phylogenetic Studies3%
  • Probiotics and Fermented Foods2.9%
  • Diet and metabolism studies2.9%
  • Other63.3%

Coauthors

All papers

Open in search
  1. Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

    Authors: Evan Bolyen, Jai Ram Rideout, Matthew R. Dillon, Nicholas A. Bokulich, Christian C. Abnet, Gabriel A. Al‐Ghalith, Harriet Alexander, Eric J. Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E. Bisanz, Kyle Bittinger, Asker Brejnrod, Colin Brislawn, C. Titus Brown, Benjamin J. Callahan, Andrés Mauricio Caraballo‐Rodríguez, John Chase, Emily K. Cope, Ricardo Silva, Christian Diener, Pieter C. Dorrestein, Gavin M. Douglas, Daniel M. Durall, Claire Duvallet, Christian F. Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M. Gauglitz, Sean M. Gibbons, Deanna L. Gibson, Antonio González, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan Holmes, Hannes Holste, Curtis Huttenhower, Gavin Huttley, Stefan Janssen, Alan K. Jarmusch, Lingjing Jiang, Benjamin D. Kaehler, Kyo Bin Kang, Christopher R. Keefe, Paul Keim, Scott T. Kelley, Dan Knights, Irina Koester, Tomasz Kościółek, Jorden Kreps, Morgan G. I. Langille, Joslynn S. Lee, Ruth E. Ley, Yongxin Liu, Erikka Loftfield, Catherine Lozupone, Massoud Maher, Clarisse Marotz, Bryan D Martin, Daniel McDonald, Lauren J. McIver, Alexey V. Melnik, Jessica L. Metcalf, Sydney Morgan, Jamie Morton, Ahmad Turan Naimey, José A. Navas-Molina, Louis‐Félix Nothias, Stephanie B. Orchanian, Talima Pearson, Samuel L Peoples, Daniel Petras, Mary L. Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam R. Rivers, Michael S. Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R. Spear, Austin D. Swafford, Luke Thompson, Pedro J. Torres, Pauline Trinh, Anupriya Tripathi, Peter J. Turnbaugh, Sabah Ul-Hasan, Justin J. J. van der Hooft, Fernando Vargas, Yoshiki Vázquez‐Baeza, Emily Vogtmann, Max von Hippel, William A. Walters and 12 more - Nature Biotechnology 2019 cited by 24,006

  2. A communal catalogue reveals Earth’s multiscale microbial diversity

    Authors: Luke Thompson, Jon G. Sanders, Daniel McDonald, Amnon Amir, Joshua Ladau, Kenneth J. Locey, Robert J. Prill, Anupriya Tripathi, Sean M. Gibbons, Gail Ackermann, José A. Navas-Molina, Stefan Janssen, Evguenia Kopylova, Yoshiki Vázquez‐Baeza, Antonio González, James T. Morton, Siavash Mirarab, Zhenjiang Zech Xu, Lingjing Jiang, Mohamed Fauzi Haroon, Jad Kanbar, Qiyun Zhu, Se Jin Song, Tomasz Kościółek, Nicholas A. Bokulich, Joshua Lefler, Colin Brislawn, Gregory Humphrey, Sarah M. Owens, Jarrad Hampton‐Marcell, Donna Berg-Lyons, Valerie J. McKenzie, Noah Fierer, Jed A. Fuhrman, Aaron Clauset, Rick Stevens, Ashley Shade, Katherine S. Pollard, Kelly D. Goodwin, Janet Jansson, Jack A. Gilbert, Rob Knight, Jose L. Agosto Rivera, Lisa Al-Moosawi, John C. Alverdy, Katherine R. Amato, Jason Andras, Largus T. Angenent, Dionysios A. Antonopoulos, Amy Apprill, David Armitage, Kate A. Ballantine, Jiří Bárta, Julia K. Baum, Allison Berry, Ashish Bhatnagar, Monica Bhatnagar, Jennifer F. Biddle, Lucie Bittner, Bazartseren Boldgiv, Eric Bottos, Donal M. Boyer, Josephine Braun, William J. Brazelton, Francis Q. Brearley, Alexandra H. Campbell, J. Gregory Caporaso, César Cardona, JoLynn Carroll, S. Craig Cary, Brenda B. Casper, Trevor C. Charles, Haiyan Chu, Danielle C. Claar, Robert G. Clark, Jonathan B. Clayton, José C. Clemente, Alyssa T. Cochran, Maureen L. Coleman, Gavin Collins, Rita R. Colwell, Mónica Contreras, Benjamin B. Crary, Simon Creer, Daniel A. Cristol, Byron C. Crump, Duoying Cui, Sarah E. Daly, Liliana M. Dávalos, Russell D. Dawson, Jennifer R. DeFazio, Frédéric Delsuc, Hebe M. Dionisi, Maria Gloria Domínguez-Bello, Robin D. Dowell, Eric A. Dubinsky, Peter O. Dunn, Danilo Ercolini, Robert E. Espinoza, Vanessa O. Ezenwa and 203 more - Nature 2017 cited by 2,950

  3. American Gut: an Open Platform for Citizen Science Microbiome Research

    Authors: Daniel McDonald, Embriette R. Hyde, Justine W. Debelius, James T. Morton, Antonio González-Torres, Gail Ackermann, Alexander A. Aksenov, Bahar Behsaz, Caitriona Brennan, Yingfeng Chen, Lindsay DeRight Goldasich, Pieter C. Dorrestein, Robert R. Dunn, Ashkaan K. Fahimipour, James Gaffney, Jack A. Gilbert, Grant Gogul, Jessica L. Green, Philip Hugenholtz, Greg Humphrey, Curtis Huttenhower, Matthew Jackson, Stefan Janssen, Dilip V. Jeste, Lingjing Jiang, Scott T. Kelley, Dan Knights, Tomasz Kościółek, Joshua Ladau, Jeff Leach, Clarisse Marotz, Dmitry Meleshko, Alexey V. Melnik, Jessica L. Metcalf, Hosein Mohimani, Emmanuel Montassier, José A. Navas-Molina, Tanya T. Nguyen, Shyamal D. Peddada, Pavel A. Pevzner, Katherine S. Pollard, Ali Rahnavard, Adam Robbins‐Pianka, Naseer Sangwan, Joshua Shorenstein, Larry Smarr, Se Jin Song, Timothy Spector, Austin D. Swafford, Varykina G. Thackray, Luke Thompson, Anupriya Tripathi, Yoshiki Vázquez‐Baeza, Alison Vrbanac, Paul E. Wischmeyer, Elaine Wolfe, Qiyun Zhu, Rob Knight, Allison E. Mann, Amnon Amir, Angel Frazier, Cameron Martino, Carlito B. Lebrilla, Catherine Lozupone, Cecil M. Lewis, Charles L. Raison, Chi Zhang, Christian L. Lauber, Christina Warinner, Christopher A. Lowry, Chris Callewaert, Cinnamon S. Bloss, Dana Willner, Daniela Domingos Galzerani, David J. Gonzalez, David A. Mills, Deepak Chopra, Dirk Gevers, Donna Berg-Lyons, Dorothy D. Sears, Doug Wendel, Elijah Lovelace, Emily C. Pierce, Emily TerAvest, Evan Bolyen, Frederic D. Bushman, Gary D. Wu, George M. Church, Gordon Saxe, Hanna D. Holscher, Ivo Ugrina, J German, J. Gregory Caporaso, Jacob M. Wozniak, Jacqueline Kerr, Jacques Ravel, James D. Lewis, Jan S. Suchodolski, Janet Jansson, Jarrad Hampton‐Marcell and 68 more - mSystems 2018 cited by 906

  4. Host variables confound gut microbiota studies of human disease

    Authors: Ivan Vujkovic-Cvijin, Jack Sklar, Lingjing Jiang, Loki Natarajan, Rob Knight, Yasmine Belkaid - Nature 2020 cited by 608

  5. Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

    Authors: Evan Bolyen, Jai Ram Rideout, Matthew R. Dillon, Nicholas A. Bokulich, Christian C. Abnet, Gabriel A. Al‐Ghalith, Harriet Alexander, Eric J. Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E. Bisanz, Kyle Bittinger, Asker Brejnrod, Colin Brislawn, C. Titus Brown, Benjamin J. Callahan, Andrés Mauricio Caraballo‐Rodríguez, John Chase, Emily K. Cope, Ricardo J.N. Bettencourt da Silva, Christian Diener, Pieter C. Dorrestein, Gavin M. Douglas, Daniel M. Durall, Claire Duvallet, Christian F. Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M. Gauglitz, Sean M. Gibbons, Deanna L. Gibson, Antonio González, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan Holmes, Hannes Holste, Curtis Huttenhower, Gavin Huttley, Stefan Janssen, Alan K. Jarmusch, Lingjing Jiang, Benjamin D. Kaehler, Kyo Bin Kang, Christopher R. Keefe, Paul Keim, Scott T. Kelley, Dan Knights, Irina Koester, Tomasz Kościółek, Jorden Kreps, Morgan G. I. Langille, Joslynn S. Lee, Ruth E. Ley, Yongxin Liu, Erikka Loftfield, Catherine Lozupone, Massoud Maher, Clarisse Marotz, Bryan D Martin, Daniel McDonald, Lauren J. McIver, Alexey V. Melnik, Jessica L. Metcalf, Sydney Morgan, Jamie Morton, Ahmad Turan Naimey, José A. Navas-Molina, Louis‐Félix Nothias, Stephanie B. Orchanian, Talima Pearson, Samuel L Peoples, Daniel Petras, Mary L. Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam R. Rivers, Michael S. Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R. Spear, Austin D. Swafford, Luke Thompson, Pedro J. Torres, Pauline Trinh, Anupriya Tripathi, Peter J. Turnbaugh, Sabah Ul-Hasan, Justin J. J. van der Hooft, Fernando Vargas, Yoshiki Vázquez‐Baeza, Emily Vogtmann, Max von Hippel, William A. Walters and 12 more - Nature Biotechnology 2019 cited by 874

  6. QIIME 2 Enables Comprehensive End‐to‐End Analysis of Diverse Microbiome Data and Comparative Studies with Publicly Available Data

    Authors: Mehrbod Estaki, Lingjing Jiang, Nicholas A. Bokulich, Daniel McDonald, Antonio González, Tomasz Kościółek, Cameron Martino, Qiyun Zhu, Amanda Birmingham, Yoshiki Vázquez‐Baeza, Matthew R. Dillon, Evan Bolyen, J. Gregory Caporaso, Rob Knight - Current Protocols in Bioinformatics 2020 cited by 562

  7. Consumption of Fermented Foods Is Associated with Systematic Differences in the Gut Microbiome and Metabolome

    Authors: Bryn C. Taylor, Franck Lejzerowicz, Marion Poirel, Justin P. Shaffer, Lingjing Jiang, Alexander A. Aksenov, Nicole S. Litwin, Gregory Humphrey, Cameron Martino, Sandrine Miller‐Montgomery, Pieter C. Dorrestein, Patrick Veiga, Se Jin Song, Daniel McDonald, Muriel Derrien, Rob Knight - mSystems 2020 cited by 198

  8. Standardized multi-omics of Earth’s microbiomes reveals microbial and metabolite diversity

    Authors: Justin P. Shaffer, Louis‐Félix Nothias, Luke Thompson, Jon G. Sanders, Rodolfo A. Salido, Sneha Couvillion, Asker Brejnrod, Franck Lejzerowicz, Niina Haiminen, Shi Huang, Holly L. Lutz, Qiyun Zhu, Cameron Martino, James T. Morton, Smruthi Karthikeyan, Mélissa Nothias-Esposito, Kai Dührkop, Sebastian Böcker, Hyun Woo Kim, Alexander A. Aksenov, Wout Bittremieux, Jeremiah J. Minich, Clarisse Marotz, MacKenzie Bryant, Karenina Sanders, Tara Schwartz, Greg Humphrey, Yoshiki Vásquez-Baeza, Anupriya Tripathi, Laxmi Parida, Anna Paola Carrieri, Kristen L. Beck, Promi Das, Antonio González, Daniel McDonald, Joshua Ladau, Søren Michael Karst, Mads Albertsen, Gail Ackermann, Jeff DeReus, Torsten Thomas, Daniel Petras, Ashley Shade, James Stegen, Se Jin Song, Thomas Metz, Austin D. Swafford, Pieter C. Dorrestein, Janet Jansson, Jack A. Gilbert, Rob Knight, Lars T. Angenant, Alison M. Berry, Leonora Bittleston, Jennifer L. Bowen, Max Chavarría, Don A. Cowan, Daniel L. Distel, Peter R. Girguis, Jaime Huerta‐Cepas, Paul R. Jensen, Lingjing Jiang, Gary M. King, Anton Lavrinienko, Aurora MacRae-Crerar, Thulani P. Makhalanyane, Tapio Mappes, Ezequiel M. Marzinelli, Gregory D. Mayer, Katherine D. McMahon, Jessica L. Metcalf, Sou Miyake, Timothy A. Mousseau, Catalina Murillo‐Cruz, David D. Myrold, Brian Palenik, Adrian A. Pinto‐Tomás, Dorota L. Porazinska, Jean‐Baptiste Ramond, Forest Rowher, Taniya Roy Chowdhury, Stuart A. Sandin, Steven K. Schmidt, Henning Seedorf, Ashley Shade, J. Reuben Shipway, Jennifer E. Smith, James Stegen, Frank J. Stewart, Karen Tait, Torsten Thomas, Yael Tarlovsky Tucker, Jana M. U’Ren, Phillip C. Watts, Nicole S. Webster, Jesse Zaneveld, Shan Zhang - Nature Microbiology 2022 cited by 183

  9. Human Skin, Oral, and Gut Microbiomes Predict Chronological Age

    Authors: Shi Huang, Niina Haiminen, Anna Paola Carrieri, Rebecca Hu, Lingjing Jiang, Laxmi Parida, Baylee J. Russell, Celeste Allaband, Amir Zarrinpar, Yoshiki Vázquez‐Baeza, Pedro Belda‐Ferre, Hongwei Zhou, Ho‐Cheol Kim, Austin D. Swafford, Rob Knight, Zhenjiang Zech Xu - mSystems 2020 cited by 157

  10. Phylogenetic Placement of Exact Amplicon Sequences Improves Associations with Clinical Information

    Authors: Stefan Janssen, Daniel McDonald, Antonio González, José A. Navas-Molina, Lingjing Jiang, Zhenjiang Zech Xu, Kevin Winker, Deborah M. Kado, Eric Orwoll, Mark Manary, Siavash Mirarab, Rob Knight - mSystems 2018 cited by 591

  11. Vitamin D metabolites and the gut microbiome in older men

    Authors: Robert L. Thomas, Lingjing Jiang, John S. Adams, Zhenjiang Zech Xu, Jian Shen, Stefan Janssen, Gail Ackermann, Dirk Vanderschueren, Steven Pauwels, Rob Knight, Eric Orwoll, Deborah M. Kado - Nature Communications 2020 cited by 180

  12. Naturalization of the microbiota developmental trajectory of Cesarean-born neonates after vaginal seeding

    Authors: Se Jin Song, Jincheng Wang, Cameron Martino, Lingjing Jiang, Wesley K. Thompson, Liat Shenhav, Daniel McDonald, Clarisse Marotz, Paul R. Harris, Caroll Hernández, Nora Henderson, Elizabeth Ackley, Deanna Nardella, Charles Gillihan, Valentina Montacuti, William Schweizer, Melanie Jay, Joan Combellick, Haipeng Sun, Izaskun García‐Mantrana, Fernando Gil Raga, María Carmen Collado, Juana I Rivera-Viñas, Maribel Campos, Jean F. Ruiz-Calderón, Rob Knight, Maria Gloria Domínguez-Bello - Med 2021 cited by 93

  13. QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

    Authors: Evan Bolyen, Jai Ram Rideout, Matthew R. Dillon, Nicholas A. Bokulich, Christian C. Abnet, Gabriel A. Al‐Ghalith, Harriet Alexander, Eric J. Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E. Bisanz, Kyle Bittinger, Asker Brejnrod, Colin Brislawn, C. Titus Brown, Benjamin J. Callahan, Andrés Mauricio Caraballo‐Rodríguez, John Chase, Emily K. Cope, Ricardo J.N. Bettencourt da Silva, Pieter C. Dorrestein, Gavin M. Douglas, Daniel M. Durall, Claire Duvallet, Christian F. Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M. Gauglitz, Deanna L. Gibson, Antonio González, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan Holmes, Hannes Holste, Curtis Huttenhower, Gavin Huttley, Stefan Janssen, Alan K. Jarmusch, Lingjing Jiang, Benjamin D. Kaehler, Kyo Bin Kang, Christopher R. Keefe, Paul Keim, Scott T. Kelley, Dan Knights, Irina Koester, Tomasz Kościółek, Jorden Kreps, Morgan G. I. Langille, Joslynn S. Lee, Ruth E. Ley, Yongxin Liu, Erikka Loftfield, Catherine Lozupone, Massoud Maher, Clarisse Marotz, Bryan D Martin, Daniel McDonald, Lauren J. McIver, Alexey V. Melnik, Jessica L. Metcalf, Sydney Morgan, Jamie Morton, Ahmad Turan Naimey, José A. Navas-Molina, Louis‐Félix Nothias, Stephanie B. Orchanian, Talima Pearson, Samuel L Peoples, Daniel Petras, Mary L. Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam R. Rivers, Michael S. Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R. Spear, Austin D. Swafford, Luke Thompson, Pedro J. Torres, Pauline Trinh, Anupriya Tripathi, Peter J. Turnbaugh, Sabah Ul-Hasan, Justin J. J. van der Hooft, Fernando Vargas, Yoshiki Vázquez‐Baeza, Emily Vogtmann, Max von Hippel, William A. Walters, Yunhu Wan, Mingxun Wang and 9 more - 2018 cited by 883

  14. Intermittent Hypoxia and Hypercapnia, a Hallmark of Obstructive Sleep Apnea, Alters the Gut Microbiome and Metabolome

    Authors: Anupriya Tripathi, Alexey V. Melnik, Jin Xue, Orit Poulsen, Michael J. Meehan, Gregory Humphrey, Lingjing Jiang, Gail Ackermann, Daniel McDonald, Dan Zhou, Rob Knight, Pieter C. Dorrestein, Gabriel G. Haddad - mSystems 2018 cited by 134

  15. Microbial Diversity in Clinical Microbiome Studies: Sample Size and Statistical Power Considerations

    Authors: Climent Casals‐Pascual, Antonio González, Yoshiki Vázquez‐Baeza, Se Jin Song, Lingjing Jiang, Rob Knight - Gastroenterology 2020 cited by 104

  16. Biologic Mechanisms of Macrophage Phenotypes Responding to Infection and the Novel Therapies to Moderate Inflammation

    Authors: Renhao Ni, Lingjing Jiang, Chaohai Zhang, Mujie Liu, Yang Luo, Zeming Hu, Xianbo Mou, Yabin Zhu - International Journal of Molecular Sciences 2023 cited by 40

  17. QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

    Authors: Evan Bolyen, Jai Ram Rideout, Matthew R. Dillon, Nicholas A. Bokulich, Christian C. Abnet, Gabriel A. Al‐Ghalith, Harriet Alexander, Eric J. Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E. Bisanz, Kyle Bittinger, Asker Brejnrod, Colin Brislawn, C. Titus Brown, Benjamin J. Callahan, Andrés Mauricio Caraballo‐Rodríguez, John Chase, Emily K. Cope, Ricardo J.N. Bettencourt da Silva, Pieter C. Dorrestein, Gavin M. Douglas, Daniel M. Durall, Claire Duvallet, Christian F. Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M. Gauglitz, Deanna L. Gibson, Antonio González, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan Holmes, Hannes Holste, Curtis Huttenhower, Gavin Huttley, Stefan Janssen, Alan K. Jarmusch, Lingjing Jiang, Benjamin D. Kaehler, Kyo Bin Kang, Christopher R. Keefe, Paul Keim, Scott T. Kelley, Dan Knights, Irina Koester, Tomasz Kościółek, Jorden Kreps, Morgan G. I. Langille, Joslynn S. Lee, Ruth E. Ley, Yongxin Liu, Erikka Loftfield, Catherine Lozupone, Massoud Maher, Clarisse Marotz, Bryan D Martin, Daniel McDonald, Lauren J. McIver, Alexey V. Melnik, Jessica L. Metcalf, Sydney Morgan, Jamie Morton, Ahmad Turan Naimey, José A. Navas-Molina, Louis‐Félix Nothias, Stephanie B. Orchanian, Talima Pearson, Samuel L Peoples, Daniel Petras, Mary L. Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam R. Rivers, Michael S. Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R. Spear, Austin D. Swafford, Luke Thompson, Pedro J. Torres, Pauline Trinh, Anupriya Tripathi, Peter J. Turnbaugh, Sabah Ul-Hasan, Justin J. J. van der Hooft, Fernando Vargas, Yoshiki Vázquez‐Baeza, Emily Vogtmann, Max von Hippel, William A. Walters, Yunhu Wan, Mingxun Wang and 10 more - 2018 cited by 584

  18. Context-aware dimensionality reduction deconvolutes gut microbial community dynamics

    Authors: Cameron Martino, Liat Shenhav, Clarisse Marotz, George Armstrong, Daniel McDonald, Yoshiki Vázquez‐Baeza, James T. Morton, Lingjing Jiang, Maria Gloria Domínguez-Bello, Austin D. Swafford, Eran Halperin, Rob Knight - Nature Biotechnology 2020 cited by 123

  19. Untargeted mass spectrometry-based metabolomics approach unveils molecular changes in raw and processed foods and beverages

    Authors: Julia M. Gauglitz, Christine M. Aceves, Alexander A. Aksenov, Gajender Aleti, Jehad Almaliti, Amina Bouslimani, Elizabeth A. R. Brown, Anaamika Campeau, Andrés Mauricio Caraballo‐Rodríguez, Rama Chaar, Ricardo Silva, Alyssa M. Demko, Francesca Di Ottavio, Emmanuel O. Elijah, Madeleine Ernst, L. Paige Ferguson, Xavier Holmes, Alan K. Jarmusch, Lingjing Jiang, Kyo Bin Kang, Irina Koester, Brian Kwan, Jie Li, Yueying Li, Alexey V. Melnik, Carlos Molina‐Santiago, Bohan Ni, Aaron L. Oom, Morgan Panitchpakdi, Daniel Petras, Robert A. Quinn, Nicole Sikora, Katharina Spengler, Bahar Teke, Anupriya Tripathi, Sabah Ul-Hasan, Justin J. J. van der Hooft, Fernando Vargas, Alison Vrbanac, Anthony Q. Vu, Steven C Wang, Kelly C. Weldon, Kayla Wilson, Jacob M. Wozniak, Michael C. Yoon, Nuno Bandeira, Pieter C. Dorrestein - Food Chemistry 2019 cited by 81

  20. SARS-CoV-2 detection status associates with bacterial community composition in patients and the hospital environment

    Authors: Clarisse Marotz, Pedro Belda‐Ferre, Farhana Ali, Promi Das, Shi Huang, Kalen Cantrell, Lingjing Jiang, Cameron Martino, Rachel E. Diner, Gibraan Rahman, Daniel McDonald, George Armstrong, Sho M. Kodera, Sonya Donato, Gertrude Ecklu-Mensah, Neil Gottel, Mariana C. Salas Garcia, Leslie Chiang, Rodolfo A. Salido, Justin P. Shaffer, Mac Kenzie Bryant, Karenina Sanders, Greg Humphrey, Gail Ackermann, Niina Haiminen, Kristen L. Beck, Ho‐Cheol Kim, Anna Paola Carrieri, Laxmi Parida, Yoshiki Vázquez‐Baeza, Francesca J. Torriani, Rob Knight, Jack A. Gilbert, Daniel A. Sweeney, Sarah M. Allard - Microbiome 2021 cited by 61

  21. Effects of the microalgae Chlamydomonas on gastrointestinal health

    Authors: Francis J. Fields, Franck Lejzerowicz, Dave Schroeder, Soo Ngoi, Miller Tran, Daniel McDonald, Lingjing Jiang, John T. Chang, Rob Knight, Stephen P. Mayfield - Journal of Functional Foods 2019 cited by 105

  22. High-Resolution Longitudinal Dynamics of the Cystic Fibrosis Sputum Microbiome and Metabolome through Antibiotic Therapy

    Authors: Ruma Raghuvanshi, Karla Vasco, Yoshiki Vázquez‐Baeza, Lingjing Jiang, James T. Morton, Danxun Li, Antonio González, Lindsay DeRight Goldasich, Gregory Humphrey, Gail Ackermann, Austin D. Swafford, Douglas Conrad, Rob Knight, Pieter C. Dorrestein, Robert A. Quinn - mSystems 2020 cited by 87

  23. Association of Subjective and Objective Measures of Sleep With Gut Microbiota Composition and Diversity in Older Men: The Osteoporotic Fractures in Men Study

    Authors: Mehrbod Estaki, Lisa Langsetmo, Michelle Shardell, Anna K. Mischel, Lingjing Jiang, Yuan Zhong, Christopher N. Kaufmann, Rob Knight, Katie L. Stone, Deborah M. Kado - The Journals of Gerontology Series A 2023 cited by 19

  24. Determination of Effect Sizes for Power Analysis for Microbiome Studies Using Large Microbiome Databases

    Authors: Gibraan Rahman, Daniel McDonald, Antonio González, Yoshiki Vázquez‐Baeza, Lingjing Jiang, Climent Casals‐Pascual, Daniel Hakim, Amanda Hazel Dilmore, Brent Nowinski, Shyamal Peddada, Rob Knight - Genes 2023 cited by 22