Shinichi Sunagawa

Active 2007–2025

130
Papers
53,093
Citations
84
h-index
122
i10-index

Citations

Citations per year for Shinichi Sunagawa1982: 1 citations1985: 1 citations1986: 1 citations1989: 1 citations1991: 2 citations1992: 5 citations1994: 2 citations1998: 1 citations1999: 1 citations2000: 1 citations2001: 1 citations2002: 1 citations2006: 3 citations2007: 7 citations2008: 4 citations2009: 30 citations2010: 23 citations2011: 41 citations2012: 46 citations2013: 122 citations2014: 224 citations2015: 494 citations2016: 846 citations2017: 908 citations2018: 1,011 citations2019: 2,329 citations2020: 2,763 citations2021: 2,925 citations2022: 2,692 citations2023: 1,926 citations2024: 2,893 citations2025: 1,526 citations2026: 75 citations1983–1984: no citations, so these years are not shown1987–1988: no citations, so these years are not shown1990: no citations, so this year is not shown1993: no citations, so this year is not shown1995–1997: no citations, so these years are not shown2003–2005: no citations, so these years are not shown

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 4,985 citing papers, 18.1% of this breakdownChina: 4,211 citing papers, 15.3% of this breakdownGermany: 1,617 citing papers, 5.9% of this breakdownUnited Kingdom: 1,434 citing papers, 5.2% of this breakdownFrance: 1,290 citing papers, 4.7% of this breakdownSpain: 893 citing papers, 3.2% of this breakdownAustralia: 884 citing papers, 3.2% of this breakdownCanada: 847 citing papers, 3.1% of this breakdownItaly: 831 citing papers, 3% of this breakdownNetherlands: 807 citing papers, 2.9% of this breakdownDenmark: 704 citing papers, 2.5% of this breakdownSwitzerland: 619 citing papers, 2.2% of this breakdown
0%18.1%Other 30.7%

Fields

  • Biochemistry, Genetics and Molecular Biology53.2%
  • Environmental Science18.9%
  • Medicine14.6%
  • Agricultural and Biological Sciences4.6%
  • Immunology and Microbiology1.8%
  • Nursing1.6%
  • Other5.3%

Topics

  • Gut microbiota and health17.7%
  • Microbial Community Ecology and Physiology5.5%
  • Genomics and Phylogenetic Studies5.1%
  • Diet and metabolism studies4.5%
  • Clostridium difficile and Clostridium perfringens research4%
  • Bacteriophages and microbial interactions2.7%
  • Other60.5%

Coauthors

All papers

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  1. Richness of human gut microbiome correlates with metabolic markers

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Karsten Kristiansen, Pierre Renault, Thomas Sicheritz‐Pontén, Willem M. de Vos, Jean‐Daniel Zucker, Jeroen Raes, Torben Hansen, Éric Guédon, Christine Delorme, Séverine Layec, Ghalia Khaci, Maarten van de Guchte, Gaetana Vandemeulebrouck, Alexandre Jamet, Rozenn Dervyn, Nicolás Sánchez, Emmanuelle Maguin, Florence Haimet, Yohanan Winogradski, Antonella Cultrone, Marion Leclerc, Catherine Juste, Hervé M. Blottière, Éric Pelletier, Denis LePaslier, François Artiguenave, Thomas Brüls, Jean Weissenbach, A. Keith Turner, Julian Parkhill, Maria Antolı́n, Chaysavanh Manichanh, Francesc Casellas, N. Boruel, Encarna Varela, Antonio Torrejón, Francisco Guarner, Gérard Denariaz, Muriel Derrien, Johan E. T. van Hylckama Vlieg, Patrick Veiga, Raish Oozeer, Jan Knol, María Rescigno, Christian Bréchot, Christine M’Rini, Alexandre Mérieux, Takuji Yamada, Peer Bork, Jun Wang, S. Dusko Ehrlich, Oluf Pedersen - Nature 2013 cited by 4,803

  2. Human gut microbes impact host serum metabolome and insulin sensitivity

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Matej Orešič, S. Dusko Ehrlich, Oluf Pedersen - Nature 2016 cited by 2,173

  3. Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Cornelia M. Ulrich, Hermann Brenner, Manimozhiyan Arumugam, Peer Bork, Georg Zeller - Nature Medicine 2019 cited by 1,387

  4. Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , - Nature, Nat. 2015 cited by 2,125

  5. An integrated catalog of reference genes in the human gut microbiome

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Karsten Kristiansen, Francisco Guarner, Oluf Pedersen, Joël Doré, S. Dusko Ehrlich, Peer Bork, Jun Wang, Peer Bork, Jun Wang, Jun Wang - Nature Biotechnology 2014 cited by 2,235

  6. Salt-responsive gut commensal modulates TH17 axis and disease

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Jonathan Jantsch, Michael Boschmann, Ralf Dechend, Markus Kleinewietfeld, Stefan Kempa, Peer Bork, Ralf A. Linker, Eric J. Alm, Dominik N. Müller - Nature 2017 cited by 1,316

  7. Structure and function of the global ocean microbiome

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Stefanie Kandels‐Lewis, Tara Oceans coordinators, Chris Bowler, Colomban de Vargas, Gabriel Gorsky, Nigel Grimsley, Pascal Hingamp, Daniele Iudicone, Olivier Jaillon, Fabrice Not, Hiroyuki Ogata, Stéphane Pesant, Sabrina Speich, Lars Stemmann, Matthew B. Sullivan, Jean Weissenbach, Patrick Wincker, Eric Karsenti, Jeroen Raes, Silvia G. Acinas, Peer Bork, Emmanuel Boss, Chris Bowler, Michael Follows, Lee Karp‐Boss, Uroš Kržič, Emmanuel G. Reynaud, Christian Sardet, Mike Sieracki, Didier Velayoudon - Science 2015 cited by 3,178

  8. Potential of fecal microbiota for early‐stage detection of colorectal cancer

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , - Molecular Systems Biology 2014 cited by 1,450

  9. Enterotypes in the landscape of gut microbial community composition

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , - Nature Microbiology 2017 cited by 1,228

  10. Structure and function of the global topsoil microbiome

    Authors: , , , , , , , , , , , , , , , , , , , , - Nature 2018 cited by 2,597

  11. Extensive transmission of microbes along the gastrointestinal tract

    Authors: , , , , , , , , , , , , , , , , - eLife 2019 cited by 568

  12. Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Jens Roat Kultima, Pierre Léonard, Florence Levenez, Ole Lund, Bouziane Moumen, Denis Le Paslier, Nicolas Pons, Oluf Pedersen, Edi Prifti, Junjie Qin, Jeroen Raes, Søren J. Sørensen, Julien Tap, Sebastian Tims, David W. Ussery, Takuji Yamada, Pierre Renault, Thomas Sicheritz‐Pontén, Peer Bork, Jun Wang, Søren Brunak, S. Dusko Ehrlich - Nature Biotechnology 2014 cited by 1,308

  13. Eukaryotic plankton diversity in the sunlit ocean

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Flora Vincent, Adriana Zingone, Céline Dimier, Marc Picheral, Sarah Searson, Stefanie Kandels‐Lewis, Tara Oceans Coordinators, Silvia G. Acinas, Peer Bork, Chris Bowler, Gabriel Gorsky, Nigel Grimsley, Pascal Hingamp, Daniele Iudicone, Fabrice Not, Hiroyuki Ogata, Stéphane Pesant, Jeroen Raes, Michael E. Sieracki, Sabrina Speich, Lars Stemmann, Shinichi Sunagawa, Jean Weissenbach, Patrick Wincker, Eric Karsenti, Emmanuel Boss, Michael Follows, Lee Karp-Boss, Uroš Kržič, Emmanuel G. Reynaud, Christian Sardet, Matthew B. Sullivan, Didier Velayoudon - Science 2015 cited by 2,129

  14. Minimum Information about an Uncultivated Virus Genome (MIUViG)

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Ilene Karsch‐Mizrachi, Hiroyuki Ogata, David Páez-Espino, Marie‐Agnès Petit, Catherine Putonti, Thomas Rattei, Alejandro Reyes, Francisco Rodríguez‐Valera, Karyna Rosario, Lynn M. Schriml, Frederik Schulz, Grieg F. Steward, Matthew B. Sullivan, Shinichi Sunagawa, Curtis A. Suttle, Ben Temperton, Susannah G. Tringe, Rebecca Vega Thurber, Nicole S. Webster, Katrine L Whiteson, Steven W. Wilhelm, K. Eric Wommack, Tanja Woyke, Kelly Wrighton, Pelin Yilmaz, Takashi Yoshida, Mark Young, Natalya Yutin, Lisa Zeigler Allen, Nikos C. Kyrpides, Emiley A. Eloe‐Fadrosh - Nature Biotechnology 2018 cited by 790

  15. Critical Assessment of Metagenome Interpretation: the second round of challenges

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Huijue Jia, Tue Sparholt Jørgensen, Silas Kieser, Terje Klemetsen, Axel Kola, Mikhail Kolmogorov, Anton Korobeynikov, Jason C. Kwan, Nathan LaPierre, Claire Lemaitre, Chenhao Li, Antoine Limasset, Fábio Malcher Miranda, Serghei Mangul, Vanessa R. Marcelino, Camille Marchet, Pierre Marijon, Dmitry Meleshko, Daniel R. Mende, Alessio Milanese, Niranjan Nagarajan, Jakob Nybo Nissen, Sergey Nurk, Leonid Oliker, Lucas Paoli, Pierre Peterlongo, Vitor C. Piro, Jacob S. Porter, Simon Rasmussen, Evan Rees, Knut Reinert, Bernhard Y. Renard, Espen Mikal Robertsen, Gail Rosen, Hans‐Joachim Ruscheweyh, Varuni Sarwal, Nicola Segata, Enrico Seiler, Lizhen Shi, Fengzhu Sun, Shinichi Sunagawa, Søren J. Sørensen, Ashleigh Thomas, Chengxuan Tong, Mirko Trajkovski, Julien Tremblay, Gherman Uritskiy, Riccardo Vicedomini, Zhengyang Wang, Ziye Wang, Zhong Wang, Andrew Warren, Nils Peder Willassen, Katherine Yelick, Ronghui You, Georg Zeller, Zhengqiao Zhao, Shanfeng Zhu, Jie Zhu, Rubén Garrido‐Oter, Petra Gastmeier, Stéphane Hacquard, Susanne Häußler, Ariane Khaledi, Friederike Maechler, Fantin Mesny, Simona Radutoiu, Paul Schulze‐Lefert, Nathiana Smit, Till Strowig and 3 more - Nature Methods 2022 cited by 396

  16. Marine DNA Viral Macro- and Microdiversity from Pole to Pole

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Gabriel Gorsky, Nigel Grimsley, Lionel Guidi, Pascal Hingamp, Daniele Iudicone, Olivier Jaillon, Stefanie Kandels-Lewis, Lee Karp-Boss, Eric Karsenti, Fabrice Not, Hiroyuki Ogata, Stéphane Pesant, Nicole Poulton, Jeroen Raes, Christian Sardet, Sabrina Speich, Lars Stemmann, Matthew B. Sullivan, Matthew B. Sullivan, Shinichi Sunagawa, Marcel Babin, Chris Bowler, Alexander I. Culley, Colomban de Vargas, Bas E. Dutilh, Daniele Iudicone, Daniele Iudicone, Simon Roux, Simon Roux, Shinichi Sunagawa, Patrick Wincker, Matthew B. Sullivan, Matthew B. Sullivan - Cell 2019 cited by 914

  17. Biosynthetic potential of the global ocean microbiome

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Serina L. Robinson, Jörn Piel, Shinichi Sunagawa - Nature 2022 cited by 409

  18. Towards standards for human fecal sample processing in metagenomic studies

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Jana Junick, Ingeborg Klymiuk, Philippe Langella, Emmanuelle Le Chatelier, Volker Mai, Chaysavanh Manichanh, Jennifer C. Martin, Clémentine Mery, Hidetoshi Morita, Paul W. O’Toole, Céline Orvain, Kiran Raosaheb Patil, John Penders, Søren Persson, Nicolas Pons, Milena Popova, Anne Salonen, Delphine Saulnier, Karen P. Scott, Bhagirath Singh, Kathleen Slezak, Patrick Veiga, James Versalovic, Liping Zhao, Erwin G. Zoetendal, S. Dusko Ehrlich, Joël Doré, Peer Bork - Nature Biotechnology 2017 cited by 904

  19. eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences

    Authors: , , , , , , , , , , , , - Nucleic Acids Research, Nucleic Acids Res. 2015 cited by 2,321

  20. Functional implications of microbial and viral gut metagenome changes in early stage L-DOPA-naïve Parkinson’s disease patients

    Authors: , , , , , , , - Genome Medicine 2017 cited by 632

  21. Towards the biogeography of prokaryotic genes

    Authors: , , , , , , , , , , , , , , , , , , , , , , - Nature 2021 cited by 244

  22. Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , - Nature 2016 cited by 927

  23. Genomic variation landscape of the human gut microbiome

    Authors: , , , , , , , , , , , , , - Nature 2012 cited by 974

  24. Tara Oceans: towards global ocean ecosystems biology

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Sabrina Speich, Lars Stemmann, Matthew B. Sullivan, Shinichi Sunagawa, Patrick Wincker, Damien Eveillard, Gabriel Gorsky, Lionel Guidi, Daniele Iudicone, Eric Karsenti, Fabien Lombard, Hiroyuki Ogata, Stéphane Pesant, Matthew B. Sullivan, Patrick Wincker, Colomban de Vargas - Nature Reviews Microbiology 2020 cited by 500