Rashmi Sinha
Active 1994–2025
- 216
- Papers
- 53,875
- Citations
- 102
- h-index
- 204
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology40.4%
- Medicine29.9%
- Environmental Science10.1%
- Agricultural and Biological Sciences7.9%
- Immunology and Microbiology2.7%
- Nursing2.3%
- Other6.7%
Topics
- Gut microbiota and health14.5%
- Nutritional Studies and Diet3.6%
- Diet and metabolism studies3.1%
- Microbial Community Ecology and Physiology2.6%
- Clostridium difficile and Clostridium perfringens research2.6%
- Probiotics and Fermented Foods2.1%
- Other71.5%
Coauthors
- Neal D. Freedman39
- Amanda J. Cross35
- Linda M. Liao34
- Erikka Loftfield30
- Barry I. Graubard25
- Emily Vogtmann23
- Christian C. Abnet18
- Joshua N. Sampson18
- Jianxin Shi17
- Nathaniel Rothman17
- Demetrius Albanes16
- Yikyung Park16
- Mary H. Ward15
- Albert R. Hollenbeck14
- Rob Knight13
- Shoichiro Tsugane13
- Arthur Schatzkin12
- Rachael Z. Stolzenberg‐Solomon12
- Steven C. Moore12
- Wen‐Yi Huang12
- Xiao‐Ou Shu12
- James J. Goedert11
- Kim Robien11
- Marc J. Gunter11
All papers
- Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
Authors: Evan Bolyen, Jai Ram Rideout, Matthew R. Dillon, Nicholas A. Bokulich, Christian C. Abnet, Gabriel A. Al‐Ghalith, Harriet Alexander, Eric J. Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E. Bisanz, Kyle Bittinger, Asker Brejnrod, Colin Brislawn, C. Titus Brown, Benjamin J. Callahan, Andrés Mauricio Caraballo‐Rodríguez, John Chase, Emily K. Cope, Ricardo Silva, Christian Diener, Pieter C. Dorrestein, Gavin M. Douglas, Daniel M. Durall, Claire Duvallet, Christian F. Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M. Gauglitz, Sean M. Gibbons, Deanna L. Gibson, Antonio González, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan Holmes, Hannes Holste, Curtis Huttenhower, Gavin Huttley, Stefan Janssen, Alan K. Jarmusch, Lingjing Jiang, Benjamin D. Kaehler, Kyo Bin Kang, Christopher R. Keefe, Paul Keim, Scott T. Kelley, Dan Knights, Irina Koester, Tomasz Kościółek, Jorden Kreps, Morgan G. I. Langille, Joslynn S. Lee, Ruth E. Ley, Yongxin Liu, Erikka Loftfield, Catherine Lozupone, Massoud Maher, Clarisse Marotz, Bryan D Martin, Daniel McDonald, Lauren J. McIver, Alexey V. Melnik, Jessica L. Metcalf, Sydney Morgan, Jamie Morton, Ahmad Turan Naimey, José A. Navas-Molina, Louis‐Félix Nothias, Stephanie B. Orchanian, Talima Pearson, Samuel L Peoples, Daniel Petras, Mary L. Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam R. Rivers, Michael S. Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R. Spear, Austin D. Swafford, Luke Thompson, Pedro J. Torres, Pauline Trinh, Anupriya Tripathi, Peter J. Turnbaugh, Sabah Ul-Hasan, Justin J. J. van der Hooft, Fernando Vargas, Yoshiki Vázquez‐Baeza, Emily Vogtmann, Max von Hippel, William A. Walters and 12 more - Nature Biotechnology 2019 cited by 24,006
- Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer
Authors: Jakob Wirbel, Paul Theodor Pyl, Ece Kartal, Konrad Zych, Alireza Kashani, Alessio Milanese, Jonas Simon Fleck, Anita Y. Voigt, Albert Pallejá, Ruby Ponnudurai, Shinichi Sunagawa, Luís Pedro Coelho, Petra Schrotz‐King, Emily Vogtmann, Nina Habermann, Emma Niméus, Andrew Maltez Thomas, Paolo Manghi, Sara Gandini, Davide Serrano, Sayaka Mizutani, Hirotsugu Shiroma, Satoshi Shiba, Tatsuhiro Shibata, Shinichi Yachida, Takuji Yamada, Levi Waldron, Alessio Naccarati, Nicola Segata, Rashmi Sinha, Cornelia M. Ulrich, Hermann Brenner, Manimozhiyan Arumugam, Peer Bork, Georg Zeller - Nature Medicine 2019 cited by 1,387
- Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
Authors: Evan Bolyen, Jai Ram Rideout, Matthew R. Dillon, Nicholas A. Bokulich, Christian C. Abnet, Gabriel A. Al‐Ghalith, Harriet Alexander, Eric J. Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E. Bisanz, Kyle Bittinger, Asker Brejnrod, Colin Brislawn, C. Titus Brown, Benjamin J. Callahan, Andrés Mauricio Caraballo‐Rodríguez, John Chase, Emily K. Cope, Ricardo J.N. Bettencourt da Silva, Christian Diener, Pieter C. Dorrestein, Gavin M. Douglas, Daniel M. Durall, Claire Duvallet, Christian F. Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M. Gauglitz, Sean M. Gibbons, Deanna L. Gibson, Antonio González, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan Holmes, Hannes Holste, Curtis Huttenhower, Gavin Huttley, Stefan Janssen, Alan K. Jarmusch, Lingjing Jiang, Benjamin D. Kaehler, Kyo Bin Kang, Christopher R. Keefe, Paul Keim, Scott T. Kelley, Dan Knights, Irina Koester, Tomasz Kościółek, Jorden Kreps, Morgan G. I. Langille, Joslynn S. Lee, Ruth E. Ley, Yongxin Liu, Erikka Loftfield, Catherine Lozupone, Massoud Maher, Clarisse Marotz, Bryan D Martin, Daniel McDonald, Lauren J. McIver, Alexey V. Melnik, Jessica L. Metcalf, Sydney Morgan, Jamie Morton, Ahmad Turan Naimey, José A. Navas-Molina, Louis‐Félix Nothias, Stephanie B. Orchanian, Talima Pearson, Samuel L Peoples, Daniel Petras, Mary L. Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam R. Rivers, Michael S. Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R. Spear, Austin D. Swafford, Luke Thompson, Pedro J. Torres, Pauline Trinh, Anupriya Tripathi, Peter J. Turnbaugh, Sabah Ul-Hasan, Justin J. J. van der Hooft, Fernando Vargas, Yoshiki Vázquez‐Baeza, Emily Vogtmann, Max von Hippel, William A. Walters and 12 more - Nature Biotechnology 2019 cited by 874
- Human Gut Microbiome and Risk for Colorectal Cancer
Authors: Jiyoung Ahn, Rashmi Sinha, Zhiheng Pei, Christine Dominianni, Jing Wu, Jianxin Shi, James J. Goedert, Richard B. Hayes, Liying Yang - JNCI Journal of the National Cancer Institute 2013 cited by 990
- Assessment of variation in microbial community amplicon sequencing by the Microbiome Quality Control (MBQC) project consortium
Authors: Rashmi Sinha, Galeb Abu-Ali, Emily Vogtmann, Anthony A. Fodor, Boyu Ren, Amnon Amir, Emma Schwager, Jonathan Crabtree, Siyuan Ma, Christian C. Abnet, Rob Knight, Owen White, Curtis Huttenhower - Nature Biotechnology 2017 cited by 570
- Colorectal Cancer and the Human Gut Microbiome: Reproducibility with Whole-Genome Shotgun Sequencing
Authors: Emily Vogtmann, Xing Hua, Georg Zeller, Shinichi Sunagawa, Anita Y. Voigt, Rajna Hercog, James J. Goedert, Jianxin Shi, Peer Bork, Rashmi Sinha - PLoS ONE 2016 cited by 395
- Sex, Body Mass Index, and Dietary Fiber Intake Influence the Human Gut Microbiome
Authors: Christine Dominianni, Rashmi Sinha, James J. Goedert, Zhiheng Pei, Liying Yang, Richard B. Hayes, Jiyoung Ahn - PLoS ONE 2015 cited by 468
- Association Between Plant and Animal Protein Intake and Overall and Cause-Specific Mortality
Authors: Jiaqi Huang, Linda M. Liao, Stephanie J. Weinstein, Rashmi Sinha, Barry I. Graubard, Demetrius Albanes - JAMA Internal Medicine 2020 cited by 237
- Tobacco, alcohol use and risk of hepatocellular carcinoma and intrahepatic cholangiocarcinoma: The Liver Cancer Pooling Project
Authors: Jessica L. Petrick, Peter T. Campbell, Jill Koshiol, Jake E. Thistle, Gabriella Andreotti, Laura E. Beane Freeman, Julie E. Buring, Andrew T. Chan, Dawn Q. Chong, Michele M. Doody, Susan M. Gapstur, John Michael Gaziano, Edward Giovannucci, Barry I. Graubard, I‐Min Lee, Linda M. Liao, Martha S. Linet, Julie R. Palmer, Jenny N. Poynter, Mark P. Purdue, Kim Robien, Lynn Rosenberg, Catherine Schairer, Howard D. Sesso, Rashmi Sinha, Meir J. Stampfer, Marcia L. Stefanick, Jean Wactawski‐Wende, Xuehong Zhang, Anne Zeleniuch‐Jacquotte, Neal D. Freedman, Katherine A. McGlynn - British Journal of Cancer 2018 cited by 247
- Fecal Metabolomic Signatures in Colorectal Adenoma Patients Are Associated with Gut Microbiota and Early Events of Colorectal Cancer Pathogenesis
Authors: Minsuk Kim, Emily Vogtmann, David A. Ahlquist, Mary E. Devens, John B. Kisiel, William R. Taylor, Bryan A. White, Vanessa L. Hale, Jaeyun Sung, Nicholas Chia, Rashmi Sinha, Jun Chen - mBio 2020 cited by 172
- Diet, nutrition, and cancer risk: what do we know and what is the way forward?
Authors: Timothy J. Key, Kathryn E. Bradbury, Aurora Perez‐Cornago, Rashmi Sinha, Konstantinos K. Tsilidis, Shoichiro Tsugane - BMJ 2020 cited by 246
- The 2022 EULAR/ACR points to consider at the early stages of diagnosis and management of suspected haemophagocytic lymphohistiocytosis/macrophage activation syndrome (HLH/MAS)
Authors: Bita Shakoory, Ashley V. Geerlinks, Marta Wilejto, Kate F. Kernan, Melissa Hines, Micol Romano, David Piskin, Angelo Ravelli, Rashmi Sinha, Daniel Aletaha, Carl E. Allen, Hamid Bassiri, Edward M. Behrens, Joseph A. Carcillo, Linda Carl, Winn Chatham, Jeffrey I. Cohen, Randy Q. Cron, Erik Drewniak, Alexei A. Grom, Lauren A. Henderson, AnnaCarin Horne, Michael B. Jordan, Kim E. Nichols, Grant S. Schulert, Sebastiaan J. Vastert, Erkan Demirkaya, Raphaela Goldbach‐Mansky, Fabrizio De Benedetti, Rebecca Marsh, Scott Canna, Bita Shakoory, Ashley Geerlinks, Marta Wilejto, Kate F Kernan, Melissa Hines, Angelo Ravelli, Rashmi Sinha, Daniel Aletaha, Carl E Allen, Hamid Bassiri, Edward M Behrens, Joseph Carcillo, Linda Carl, W Winn Chatham, Jeffrey I Cohen, Randall Q Cron, Erik Drewniak, Alexei A Grom, Lauren A Henderson, AnnaCarin Horne, Michael Jordan, Kim E Nichols, Grant S Schulert, Sebastiaan Vastert, Raphaela Goldbach-Mansky, Fabrizio de Benedetti, Rebecca A Marsh, Scott W Canna - Annals of the Rheumatic Diseases 2023 cited by 136
- Postmenopausal breast cancer and oestrogen associations with the IgA-coated and IgA-noncoated faecal microbiota
Authors: James J. Goedert, Xing Hua, Agata Bielecka‐Dąbrowa, Isao Okayasu, Ginger L. Milne, Gieira S. Jones, Mutsunori Fujiwara, Rashmi Sinha, Yunhu Wan, Xia Xu, Jacques Ravel, Jianxin Shi, Noah W. Palm, Heather Spencer Feigelson - British Journal of Cancer 2018 cited by 145
- Fecal Microbiota, Fecal Metabolome, and Colorectal Cancer Interrelations
Authors: Rashmi Sinha, Jiyoung Ahn, Joshua N. Sampson, Jianxin Shi, Guoqin Yu, Xiaoqin Xiong, Richard B. Hayes, James J. Goedert - PLoS ONE 2016 cited by 222
- AI Writing Assistants Influence Topic Choice in Self-Presentation
Authors: Ritika Poddar, Rashmi Sinha, Mor Naaman, Maurice Jakesch - Extended Abstracts of the 2023 CHI Conference on Human Factors in Computing Systems, CHI Extended Abstracts 2023 cited by 28
- Association of Coffee Drinking with Total and Cause-Specific Mortality
Authors: Neal D. Freedman, Yikyung Park, Christian C. Abnet, Albert R. Hollenbeck, Rashmi Sinha - New England Journal of Medicine 2012 cited by 600
- Mortality from different causes associated with meat, heme iron, nitrates, and nitrites in the NIH-AARP Diet and Health Study: population based cohort study
Authors: Arash Etemadi, Rashmi Sinha, Mary H. Ward, Barry I. Graubard, Maki Inoue‐Choi, Sanford M. Dawsey, Christian C. Abnet - BMJ 2017 cited by 293
- Association of glycaemic index and glycaemic load with type 2 diabetes, cardiovascular disease, cancer, and all-cause mortality: a meta-analysis of mega cohorts of more than 100 000 participants
Authors: David J.A. Jenkins, Walter C. Willett, Salim Yusuf, Frank B. Hu, Andrea J. Glenn, Simin Liu, Andrew Mente, Victoria Miller, Shrikant I. Bangdiwala, Hertzel C. Gerstein, Sabina Sieri, Pietro Ferrari, Alpa V. Patel, Marjorie L. McCullough, Loı̈c Le Marchand, Neal D. Freedman, Erikka Loftfield, Rashmi Sinha, Xiao‐Ou Shu, Mathilde Touvier, Norie Sawada, Shoichiro Tsugane, Piet A. van den Brandt, Kerem Shuval, Tauseef Khan, Melanie Paquette, Sandhya Sahye‐Pudaruth, Darshna Patel, Teenie Fei Yi Siu, Korbua Srichaikul, Cyril W.C. Kendall, John L. Sievenpiper, Balachandran Bashyam, Andreea Zurbau, Xunan Wang, Fred Liang, Wanning Yang - The Lancet Diabetes & Endocrinology 2024 cited by 98
- Association of Dietary Fiber and Yogurt Consumption With Lung Cancer Risk
Authors: Jae Jeong Yang, Danxia Yu, Yong-Bing Xiang, William J. Blot, Emily White, Kim Robien, Rashmi Sinha, Yikyung Park, Yumie Takata, DeAnn Lazovich, Yu-Tang Gao, Xuehong Zhang, Qing Lan, Bas Bueno‐de‐Mesquita, Ingegerd Johansson, Rosario Tumino, Elio Ríboli, Anne Tjønneland, Guri Skeie, J. Ramón Quirós, Mattias Johansson, Stephanie A. Smith‐Warner, Wei Zheng, Xiao‐Ou Shu - JAMA Oncology 2019 cited by 106
- Associations of fecal microbial profiles with breast cancer and nonmalignant breast disease in the Ghana Breast Health Study
Authors: Doratha A. Byrd, Emily Vogtmann, Zeni Wu, Yongli Han, Yunhu Wan, Joe‐Nat Clegg‐Lamptey, Joel Yarney, Beatrice Wiafe‐Addai, Seth Wiafe, Baffour Awuah, Daniel Ansong, Kofi Nyarko, Autumn G. Hullings, Xing Hua, Thomas U. Ahearn, James J. Goedert, Jianxin Shi, Rob Knight, Jonine D. Figueroa, Louise A. Brinton, Montserrat García‐Closas, Rashmi Sinha - International Journal of Cancer 2021 cited by 83
- DNA extraction for human microbiome studies: the issue of standardization
Authors: K. Leigh Greathouse, Rashmi Sinha, Emily Vogtmann - Genome biology 2019 cited by 134
- Association of Coffee Drinking With Mortality by Genetic Variation in Caffeine Metabolism
Authors: Erikka Loftfield, Marilyn C. Cornelis, Neil E. Caporaso, Kai Yu, Rashmi Sinha, Neal D. Freedman - JAMA Internal Medicine 2018 cited by 182
- The Oral Microbiome and Lung Cancer Risk: An Analysis of 3 Prospective Cohort Studies
Authors: Emily Vogtmann, Xing Hua, Guoqin Yu, Vaishnavi Purandare, Autumn G. Hullings, Dantong Shao, Yunhu Wan, Shilan Li, Casey Dagnall, Kristine Jones, Belynda Hicks, Amy Hutchinson, J. Gregory Caporaso, William Wheeler, Dale P. Sandler, Laura E. Beane Freeman, Linda M. Liao, Wen‐Yi Huang, Neal D. Freedman, Neil E. Caporaso, Rashmi Sinha, Mitchell H. Gail, Jianxin Shi, Christian C. Abnet - JNCI Journal of the National Cancer Institute 2022 cited by 83
- QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
Authors: Evan Bolyen, Jai Ram Rideout, Matthew R. Dillon, Nicholas A. Bokulich, Christian C. Abnet, Gabriel A. Al‐Ghalith, Harriet Alexander, Eric J. Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E. Bisanz, Kyle Bittinger, Asker Brejnrod, Colin Brislawn, C. Titus Brown, Benjamin J. Callahan, Andrés Mauricio Caraballo‐Rodríguez, John Chase, Emily K. Cope, Ricardo J.N. Bettencourt da Silva, Pieter C. Dorrestein, Gavin M. Douglas, Daniel M. Durall, Claire Duvallet, Christian F. Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M. Gauglitz, Deanna L. Gibson, Antonio González, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan Holmes, Hannes Holste, Curtis Huttenhower, Gavin Huttley, Stefan Janssen, Alan K. Jarmusch, Lingjing Jiang, Benjamin D. Kaehler, Kyo Bin Kang, Christopher R. Keefe, Paul Keim, Scott T. Kelley, Dan Knights, Irina Koester, Tomasz Kościółek, Jorden Kreps, Morgan G. I. Langille, Joslynn S. Lee, Ruth E. Ley, Yongxin Liu, Erikka Loftfield, Catherine Lozupone, Massoud Maher, Clarisse Marotz, Bryan D Martin, Daniel McDonald, Lauren J. McIver, Alexey V. Melnik, Jessica L. Metcalf, Sydney Morgan, Jamie Morton, Ahmad Turan Naimey, José A. Navas-Molina, Louis‐Félix Nothias, Stephanie B. Orchanian, Talima Pearson, Samuel L Peoples, Daniel Petras, Mary L. Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam R. Rivers, Michael S. Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R. Spear, Austin D. Swafford, Luke Thompson, Pedro J. Torres, Pauline Trinh, Anupriya Tripathi, Peter J. Turnbaugh, Sabah Ul-Hasan, Justin J. J. van der Hooft, Fernando Vargas, Yoshiki Vázquez‐Baeza, Emily Vogtmann, Max von Hippel, William A. Walters, Yunhu Wan, Mingxun Wang and 9 more - 2018 cited by 883
