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Paul Wilmes

Active 2004–2025

111
Papers
19,536
Citations
58
h-index
102
i10-index

Citations

Citations per year for Paul Wilmes1994: 1 citations1999: 1 citations2000: 1 citations2001: 1 citations2002: 1 citations2005: 1 citations2006: 4 citations2007: 7 citations2008: 13 citations2009: 31 citations2010: 40 citations2011: 20 citations2012: 41 citations2013: 51 citations2014: 141 citations2015: 156 citations2016: 216 citations2017: 337 citations2018: 347 citations2019: 843 citations2020: 998 citations2021: 1,258 citations2022: 1,067 citations2023: 903 citations2024: 1,276 citations2025: 812 citations2026: 36 citations1995–1998: no citations, so these years are not shown2003–2004: no citations, so these years are not shown

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 2,603 citing papers, 20.6% of this breakdownChina: 1,862 citing papers, 14.7% of this breakdownGermany: 683 citing papers, 5.4% of this breakdownUnited Kingdom: 629 citing papers, 5% of this breakdownItaly: 442 citing papers, 3.5% of this breakdownFrance: 435 citing papers, 3.4% of this breakdownCanada: 413 citing papers, 3.3% of this breakdownNetherlands: 390 citing papers, 3.1% of this breakdownAustralia: 369 citing papers, 2.9% of this breakdownSpain: 359 citing papers, 2.8% of this breakdownJapan: 334 citing papers, 2.6% of this breakdownIndia: 271 citing papers, 2.1% of this breakdown
0%20.6%Other 30.6%

Institutions

Fields

  • Biochemistry, Genetics and Molecular Biology55.7%
  • Medicine18.3%
  • Environmental Science5.5%
  • Immunology and Microbiology4.5%
  • Agricultural and Biological Sciences4.5%
  • Engineering2.6%
  • Other8.9%

Topics

  • Gut microbiota and health19.3%
  • Clostridium difficile and Clostridium perfringens research4.4%
  • Probiotics and Fermented Foods3.9%
  • Diet and metabolism studies3.6%
  • Microbial Community Ecology and Physiology2%
  • Genomics and Phylogenetic Studies2%
  • Other64.8%

Coauthors

All papers

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  1. A Dietary Fiber-Deprived Gut Microbiota Degrades the Colonic Mucus Barrier and Enhances Pathogen Susceptibility

    Authors: Mahesh S. Desai, Anna M. Seekatz, Nicole M. Koropatkin, Nobuhiko Kamada, Christina Hickey, Mathis Wolter, Nicholas A. Pudlo, Sho Kitamoto, Nicolas Terrapon, Arnaud Muller, Vincent B. Young, Bernard Henrissat, Paul Wilmes, Thaddeus S. Stappenbeck, Gabriel Núñez, Eric C. Martens - Cell 2016 cited by 2,892

  2. Treg induction by a rationally selected mixture of Clostridia strains from the human microbiota

    Authors: Koji Atarashi, Takeshi Tanoue, Kenshiro Oshima, Wataru Suda, Yuji Nagano, Hiroyoshi Nishikawa, Shinji Fukuda, Takuro Saito, Seiko Narushima, Koji Hase, Sangwan Kim, Joëlle V. Fritz, Paul Wilmes, Satoshi Ueha, Kouji Matsushima, Hiroshi Ohno, Bernat Olle, Shimon Sakaguchi, Tadatsugu Taniguchi, Hidetoshi Morita, Masahira Hattori, Kenya Honda - Nature 2013 cited by 2,936

  3. Extensive transmission of microbes along the gastrointestinal tract

    Authors: Thomas Schmidt, Matthew R. Hayward, Luís Pedro Coelho, Simone S. Li, Paul Igor Costea, Anita Y. Voigt, Jakob Wirbel, Oleksandr M. Maistrenko, Renato Alves, Emma Bergsten, Carine de Beaufort, Iradj Sobhani, Anna Heintz‐Buschart, Shinichi Sunagawa, Georg Zeller, Paul Wilmes, Peer Bork - eLife 2019 cited by 568

  4. Human Gut Microbiome: Function Matters

    Authors: Anna Heintz‐Buschart, Paul Wilmes - Trends in Microbiology 2017 cited by 776

  5. Reporting guidelines for human microbiome research: the STORMS checklist

    Authors: Chloe Mirzayi, Audrey Renson, Massive Analysis and Quality Control Society, Cesare Furlanello, Susanna‐Assunta Sansone, Fatima Zohra, Shaimaa Elsafoury, Ludwig Geistlinger, Lora J. Kasselman, Kelly Eckenrode, Janneke van de Wijgert, Amy Loughman, Francine Z. Marques, David A. MacIntyre, Manimozhiyan Arumugam, Rimsha Azhar, Francesco Beghini, Kirk Bergstrom, Ami S. Bhatt, Jordan E. Bisanz, Jonathan Braun, Héctor Corrada Bravo, Gregory A. Buck, Frederic D. Bushman, David Casero, Gerard Clarke, María Carmen Collado, Paul D. Cotter, John F. Cryan, Ryan T. Demmer, Suzanne Devkota, Eran Elinav, Juan S. Escobar, Jennifer M. Fettweis, ROBERT FINN, Anthony A. Fodor, Sofia K. Forslund, André Franke, Cesare Furlanello, Jack Gilbert, Elizabeth A. Grice, Benjamin Haibe‐Kains, Scott A. Handley, Pamela Herd, Susan Holmes, Jonathan P. Jacobs, Lisa Karstens, Rob Knight, Dan Knights, Omry Koren, Douglas S. Kwon, Morgan G. I. Langille, Brianna Lindsay, Dermot McGovern, Alice C. McHardy, Shannon K. McWeeney, Noel T. Mueller, Luigi Nezi, Matthew R. Olm, Noah W. Palm, Edoardo Pasolli, Jeroen Raes, Matthew R. Redinbo, Malte Rühlemann, R. Balfour Sartor, Patrick D. Schloss, Lynn M. Schriml, Eran Segal, Michelle Shardell, Thomas J. Sharpton, Ekaterina Smirnova, Harry Sokol, Justin L. Sonnenburg, Sujatha Srinivasan, Louise B. Thingholm, Peter J. Turnbaugh, Vaibhav Upadhyay, Ramona Walls, Paul Wilmes, Takuji Yamada, Georg Zeller, Mingyu Zhang, Ni Zhao, Liping Zhao, Wenjun Bao, Aedín C. Culhane, Viswanath Devanarayan, Joaquı́n Dopazo, Xiaohui Fan, Matthias Fischer, Wendell Jones, Rebecca Kusko, Christopher E. Mason, Tim R. Mercer, Susanna‐Assunta Sansone, Andreas Scherer, Leming Shi, Shraddha Thakkar, Weida Tong, Russ Wolfinger and 6 more - Nature Medicine 2021 cited by 471

  6. The gut microbial metabolite formate exacerbates colorectal cancer progression

    Authors: Dominik Ternes, Mina Tsenkova, Vitaly I. Pozdeev, Marianne Meyers, Eric Koncina, Sura Atatri, Martine Schmitz, Jessica Karta, Maryse Schmoetten, Almut Heinken, Fabien Rodriguez, Catherine Delbrouck, Anthoula Gaigneaux, Aurélien Ginolhac, Tam T. D. Nguyen, Léa Grandmougin, Audrey Frachet-Bour, Camille Martin‐Gallausiaux, Maria Pires Pacheco, Lorie Neuberger-Castillo, Paulo Miranda, Nikolaus Zuegel, Jean-Yves Ferrand, Manon Gantenbein, Thomas Sauter, Daniel J. Slade, Ines Thiele, Johannes Meiser, Serge Haan, Paul Wilmes, Elisabeth Letellier - Nature Metabolism 2022 cited by 305

  7. Generation of genome-scale metabolic reconstructions for 773 members of the human gut microbiota

    Authors: Stefanía Magnúsdóttir, Almut Heinken, Laura Kutt, Dmitry A. Ravcheev, Eugen Bauer, Alberto Noronha, Kacy Greenhalgh, Christian Jäger, Joanna Bagińska, Paul Wilmes, Ronan M. T. Fleming, Ines Thiele - Nature Biotechnology 2016 cited by 875

  8. Glutathione Restricts Serine Metabolism to Preserve Regulatory T Cell Function

    Authors: Henry Kurniawan, Davide Franchina, Luana Guerra, Lynn Bonetti, Leticia Soriano‐Baguet, Melanie Grusdat, Lisa Schlicker, Oliver Hunewald, Catherine Dostert, Myriam P. Merz, Carole Binsfeld, Gordon S. Duncan, Sophie Farinelle, Yannic Nonnenmacher, Jillian Haight, Dennis Das Gupta, Anouk Ewen, Rabia Taskesen, Rashi Halder, Ying Chen, Christian Jäger, Markus Ollert, Paul Wilmes, Vasilis Vasiliou, Isaac S. Harris, Christiane B. Knobbe‐Thomsen, Jonathan D. Turner, Tak W. Mak, Michael Lohoff, Johannes Meiser, Karsten Hiller, Dirk Brenner - Cell Metabolism 2020 cited by 241

  9. A microfluidics-based in vitro model of the gastrointestinal human–microbe interface

    Authors: Pranjul Shah, Joëlle V. Fritz, Enrico Glaab, Mahesh S. Desai, Kacy Greenhalgh, Audrey Frachet, Magdalena Niegowska, Matthew D. Estes, Christian Jäger, Carole Seguin‐Devaux, Frédéric Zenhausern, Paul Wilmes - Nature Communications 2016 cited by 646

  10. The nasal and gut microbiome in Parkinson's disease and idiopathic rapid eye movement sleep behavior disorder

    Authors: Anna Heintz‐Buschart, Urvashi Pandey, Tamara Wicke, Friederike Sixel‐Döring, Annette Janzen, Elisabeth Sittig‐Wiegand, Claudia Trenkwalder, Wolfgang H. Oertel, Brit Mollenhauer, Paul Wilmes - Movement Disorders 2017 cited by 564

  11. The oral–gut microbiome axis in health and disease

    Authors: Benoît J. Kunath, Charlotte De Rudder, Cédric C. Laczny, Elisabeth Letellier, Paul Wilmes - Nature Reviews Microbiology 2024 cited by 242

  12. Microbiome in Colorectal Cancer: How to Get from Meta-omics to Mechanism?

    Authors: Dominik Ternes, Jessica Karta, Mina Tsenkova, Paul Wilmes, Serge Haan, Elisabeth Letellier - Trends in Microbiology 2020 cited by 261

  13. Birth mode is associated with earliest strain-conferred gut microbiome functions and immunostimulatory potential

    Authors: Linda Wampach, Anna Heintz‐Buschart, Joëlle V. Fritz, Javier Ramiro‐Garcia, Janine Habier, Malte Herold, Shaman Narayanasamy, Anne Kaysen, Angela Hogan, L. Bindl, Jean Bottu, Rashi Halder, Conny Sjöqvist, Patrick May, Anders F. Andersson, Carine de Beaufort, Paul Wilmes - Nature Communications 2018 cited by 294

  14. Integrated multi-omics of the human gut microbiome in a case study of familial type 1 diabetes

    Authors: Anna Heintz‐Buschart, Patrick May, Cédric C. Laczny, Laura Lebrun, Camille Bellora, Abhimanyu Krishna, Linda Wampach, Jochen G. Schneider, Angela Hogan, Carine de Beaufort, Paul Wilmes - Nature Microbiology 2016 cited by 341

  15. PathoFact: a pipeline for the prediction of virulence factors and antimicrobial resistance genes in metagenomic data

    Authors: Laura de Nies, Sara Lopes, Susheel Bhanu Busi, Valentina Galata, Anna Heintz‐Buschart, Cédric C. Laczny, Patrick May, Paul Wilmes - Microbiome 2021 cited by 197

  16. Reservoirs of antimicrobial resistance in the context of One Health

    Authors: Milena Despotović, Laura de Nies, Susheel Bhanu Busi, Paul Wilmes - Current Opinion in Microbiology 2023 cited by 130

  17. The microbiome-gut-brain axis in acute and chronic brain diseases

    Authors: Corinne Benakis, Camille Martin‐Gallausiaux, Jean‐Pierre Trezzi, Phillip E. Melton, Arthur Liesz, Paul Wilmes - Current Opinion in Neurobiology 2019 cited by 190

  18. Colonization and Succession within the Human Gut Microbiome by Archaea, Bacteria, and Microeukaryotes during the First Year of Life

    Authors: Linda Wampach, Anna Heintz‐Buschart, Angela Hogan, Emilie Muller, Shaman Narayanasamy, Cédric C. Laczny, Luisa W. Hugerth, L. Bindl, Jean Bottu, Anders F. Andersson, Carine de Beaufort, Paul Wilmes - Frontiers in Microbiology 2017 cited by 265

  19. Critical Assessment of MetaProteome Investigation (CAMPI): a multi-laboratory comparison of established workflows

    Authors: Tim Van Den Bossche, Benoît J. Kunath, Kay Schallert, Stephanie Serena Schäpe, Paul E. Abraham, Jean Armengaud, Magnus Ø. Arntzen, Ariane Bassignani, Dirk Benndorf, Stephan Fuchs, Richard J. Giannone, Timothy J. Griffin, Live H. Hagen, Rashi Halder, Céline Henry, Robert L. Hettich, Robert Heyer, Pratik Jagtap, Nico Jehmlich, Marlene Jensen, Catherine Juste, Manuel Kleiner, Olivier Langella, Theresa Lehmann, Emma Leith, Patrick May, Bart Mesuere, Guylaine Miotello, Samantha L. Peters, Olivier Pible, Pedro T. Queiros, Udo Reichl, Bernhard Y. Renard, Henning Schiebenhoefer, Alexander Sczyrba, Alessandro Tanca, Kathrin Trappe, Jean‐Pierre Trezzi, Sergio Uzzau, Pieter Verschaffelt, Martin von Bergen�, Paul Wilmes, Maximilian Wolf, Lennart Martens, Thilo Muth - Nature Communications 2021 cited by 122

  20. The human gut microbiome in health: establishment and resilience of microbiota over a lifetime

    Authors: Kacy Greenhalgh, Kristen M. Meyer, Kjersti M. Aagaard, Paul Wilmes - Environmental Microbiology 2016 cited by 219

  21. The Metaproteomics Initiative: a coordinated approach for propelling the functional characterization of microbiomes

    Authors: Tim Van Den Bossche, Magnus Ø. Arntzen, Dörte Becher, Dirk Benndorf, Vincent G. H. Eijsink, Céline Henry, Pratik Jagtap, Nico Jehmlich, Catherine Juste, Benoît J. Kunath, Bart Mesuere, Thilo Muth, Phillip B. Pope, Jana Seifert, Alessandro Tanca, Sergio Uzzau, Paul Wilmes, Robert L. Hettich, Jean Armengaud - Microbiome 2021 cited by 103

  22. Genetic and metabolic links between the murine microbiome and memory

    Authors: Jian‐Hua Mao, Young‐Mo Kim, Yanxia Zhou, Dehong Hu, Chenhan Zhong, Hang Chang, Colin Brislawn, Sarah Fansler, Sasha A. Langley, Yunshan Wang, B. Y. Loulou Peisl, S Celniker, David W. Threadgill, Paul Wilmes, Galya Orr, Thomas Metz, Janet Jansson, Antoine M. Snijders - Microbiome 2020 cited by 115

  23. Fusobacterium nucleatum Extracellular Vesicles Modulate Gut Epithelial Cell Innate Immunity via FomA and TLR2

    Authors: Camille Martin‐Gallausiaux, Antoine Malabirade, Janine Habier, Paul Wilmes - Frontiers in Immunology 2020 cited by 68

  24. Integration of time-series meta-omics data reveals how microbial ecosystems respond to disturbance

    Authors: Malte Herold, Susana Martínez Arbas, Shaman Narayanasamy, Abdul Sheik, Luise A. K. Kleine-Borgmann, Laura Lebrun, Benoît J. Kunath, Hugo Roume, Irina Bessarab, Rohan B. H. Williams, John D. Gillece, James M. Schupp, Paul Keim, Christian Jäger, Michael R. Hoopmann, Robert L. Moritz, Yuzhen Ye, Sujun Li, Haixu Tang, Anna Heintz‐Buschart, Patrick May, Emilie Muller, Cédric C. Laczny, Paul Wilmes - Nature Communications 2020 cited by 103