D.R. Mani
Active 1990–2025
- Also published as
- D. R. Mani
- 81
- Papers
- 22,864
- Citations
- 61
- h-index
- 75
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology45.4%
- Medicine30.4%
- Chemistry13.7%
- Computer Science3.2%
- Immunology and Microbiology2.9%
- Neuroscience1.5%
- Other2.9%
Topics
- Advanced Proteomics Techniques and Applications6%
- Ubiquitin and proteasome pathways3.3%
- Mass Spectrometry Techniques and Applications2.7%
- Protein Degradation and Inhibitors2.6%
- RNA modifications and cancer2.6%
- Bioinformatics and Genomic Networks2.6%
- Other80.2%
Coauthors
- Steven A. Carr39
- Karl R. Clauser21
- Karsten Krug20
- Michael A. Gillette18
- Namrata D. Udeshi14
- Yize Li14
- Philipp Mertins13
- Hasmik Keshishian11
- Song Cao11
- Yongchao Dou11
- Lijun Chen10
- Shankha Satpathy10
- Bo Wen9
- David Fenyö9
- Francesca Petralia9
- Marina A. Gritsenko9
- Matthew A. Wyczalkowski9
- Chen Huang8
- Henry Rodriguez8
- Yifat Geffen8
- Yingwei Hu8
- Anna Calinawan7
- David I. Heiman7
- Eric J. Jaehnig7
All papers
- Proteogenomic Characterization Reveals Therapeutic Vulnerabilities in Lung Adenocarcinoma
Authors: Michael A. Gillette, Shankha Satpathy, Song Cao, Saravana M. Dhanasekaran, Suhas Vasaikar, Karsten Krug, Francesca Petralia, Yize Li, Wen-Wei Liang, Boris Reva, Azra Krek, Jiayi Ji, Xiaoyu Song, Wenke Liu, Runyu Hong, Lijun Yao, Lili M. Blumenberg, Sara R. Savage, Michael C. Wendl, Bo Wen, Kai Li, Lauren C. Tang, Melanie A. MacMullan, Shayan C. Avanessian, M. Harry Kane, Chelsea J. Newton, MacIntosh Cornwell, Ramani Kothadia, Weiping Ma, Seungyeul Yoo, Rahul Mannan, Pankaj Vats, Chandan Kumar‐Sinha, Emily Kawaler, Tatiana Omelchenko, Antonio Colaprico, Yifat Geffen, Yosef E. Maruvka, Felipe da Veiga Leprevost, Maciej Wiznerowicz, Zeynep H. Gümüş, Rajwanth Veluswamy, Galen Hostetter, David I. Heiman, Matthew A. Wyczalkowski, Tara Hiltke, Mehdi Mesri, Christopher R. Kinsinger, Emily S. Boja, Gilbert S. Omenn, Arul M. Chinnaiyan, Henry Rodriguez, Qing Kay Li, Scott D. Jewell, Mathangi Thiagarajan, Gad Getz, Bing Zhang, David Fenyö, Kelly V. Ruggles, Marcin Cieślik, Ana I. Robles, Karl R. Clauser, Ramaswamy Govindan, Pei Wang, Alexey I. Nesvizhskii, Li Ding, D.R. Mani, Steven A. Carr, Alex Webster, Alicia Francis, Alyssa Charamut, Amanda G. Paulovich, Amy M. Perou, Andrew K. Godwin, Andrii Karnuta, Annette Marrero-Oliveras, Barbara Hindenach, Barbara L. Pruetz, Bartosz Kubisa, Brian Druker, Chet Birger, Corbin D. Jones, Dana R. Valley, Daniel C. Rohrer, Daniel Cui Zhou, Daniel W. Chan, David Chesla, David Clark, Dmitry Rykunov, Donghui Tan, Elena V. Ponomareva, Elizabeth R. Duffy, Eric Burks, Eric E. Schadt, Erik J. Bergstrom, Eugene Fedorov, Ewa P. Malc, George D. Wilson, Haiquan Chen, Halina Krzystek and 86 more - Cell 2020 cited by 852
- Proteogenomic and metabolomic characterization of human glioblastoma
Authors: Liang-Bo Wang, Alla Y. Karpova, Marina A. Gritsenko, Jennifer Kyle, Song Cao, Yize Li, Dmitry Rykunov, Antonio Colaprico, Joseph H. Rothstein, Runyu Hong, Vasileios Stathias, MacIntosh Cornwell, Francesca Petralia, Yige Wu, Boris Reva, Karsten Krug, Pietro Pugliese, Emily Kawaler, Lindsey K. Olsen, Wen-Wei Liang, Xiaoyu Song, Yongchao Dou, Michael C. Wendl, Wagma Caravan, Wenke Liu, Daniel Cui Zhou, Jiayi Ji, Chia‐Feng Tsai, Vladislav Petyuk, Jamie Moon, Weiping Ma, Rosalie Chu, Karl Weitz, Ronald Moore, Matthew Monroe, Rui Zhao, Xiaolu Yang, Seungyeul Yoo, Azra Krek, Alexis Demopoulos, Houxiang Zhu, Matthew A. Wyczalkowski, Joshua F. McMichael, Brittany Henderson, Caleb M. Lindgren, Hannah Boekweg, Shuangjia Lu, Jessika Baral, Lijun Yao, Kelly G. Stratton, Lisa Bramer, Erika Zink, Sneha Couvillion, Kent Bloodsworth, Shankha Satpathy, Weiva Sieh, Simina M. Boca, Stephan C. Schürer, Feng Chen, Maciej Wiznerowicz, Karen A. Ketchum, Emily S. Boja, Christopher R. Kinsinger, Ana I. Robles, Tara Hiltke, Mathangi Thiagarajan, Alexey I. Nesvizhskii, Bing Zhang, D.R. Mani, Michele Ceccarelli, Xi S. Chen, Sandra Cottingham, Qing Kay Li, Albert H. Kim, David Fenyö, Kelly V. Ruggles, Henry Rodriguez, Mehdi Mesri, Samuel Payne, Adam Resnick, Pei Wang, Richard Smith, Antonio Iavarone, Milan G. Chheda, Jill S. Barnholtz‐Sloan, Karin Rodland, Tao Liu, Li Ding, Anupriya Agarwal, Mitual Amin, Eunkyung An, Matthew L. Anderson, David W. Andrews, Thomas Bauer, Chet Birger, Michael J. Birrer, Lili M. Blumenberg, William Bocik, Uma Borate, Melissa Borucki and 138 more - Cancer Cell 2021 cited by 692
- Proteogenomic characterization of pancreatic ductal adenocarcinoma
Authors: Liwei Cao, Chen Huang, Daniel Cui Zhou, Yingwei Hu, T. Mamie Lih, Sara R. Savage, Karsten Krug, David Clark, Michael Schnaubelt, Lijun Chen, Felipe da Veiga Leprevost, Rodrigo Vargas Eguez, Weiming Yang, Jianbo Pan, Bo Wen, Yongchao Dou, Wen Jiang, Yuxing Liao, Zhiao Shi, Nadezhda V. Terekhanova, Song Cao, Rita Jui-Hsien Lu, Yize Li, Ruiyang Liu, Houxiang Zhu, Peter Ronning, Yige Wu, Matthew A. Wyczalkowski, Hariharan Easwaran, Ludmila Danilova, Arvind Singh Mer, Seungyeul Yoo, Joshua M. Wang, Wenke Liu, Benjamin Haibe‐Kains, Mathangi Thiagarajan, Scott D. Jewell, Galen Hostetter, Chelsea J. Newton, Qing Kay Li, Michael H. A. Roehrl, David Fenyö, Pei Wang, Alexey I. Nesvizhskii, D.R. Mani, Gilbert S. Omenn, Emily S. Boja, Mehdi Mesri, Ana I. Robles, Henry Rodriguez, Oliver F. Bathe, Daniel W. Chan, Ralph H. Hruban, Li Ding, Bing Zhang, Hui Zhang, Mitual Amin, Eunkyung An, Christina Ayad, Thomas Bauer, Chet Birger, Michael J. Birrer, Simina M. Boca, William Bocik, Melissa Borucki, Shuang Cai, Steven A. Carr, Sandra Cerda, Huan Chen, Steven Chen, David Chesla, Arul M. Chinnaiyan, Antonio Colaprico, Sandra Cottingham, Magdalena Derejska, Saravana M. Dhanasekaran, Marcin J. Domagalski, Brian Druker, Elizabeth R. Duffy, Maureen A. Dyer, Nathan Edwards, Matthew J. Ellis, Jennifer Eschbacher, Alicia Francis, Jesse Francis, Stacey Gabriel, N Gabrovski, Johanna Gardner, Gad Getz, Michael A. Gillette, Charles A. Goldthwaite, Pamela Grady, Shuai Guo, Pushpa Hariharan, Tara Hiltke, Barbara Hindenach, Katherine A. Hoadley, Jasmine Huang, Corbin D. Jones, Karen A. Ketchum and 39 more - Cell 2021 cited by 610
- Proteogenomics connects somatic mutations to signalling in breast cancer
Authors: NCI CPTAC, Philipp Mertins, D.R. Mani, Kelly V. Ruggles, Michael A. Gillette, Karl R. Clauser, Pei Wang, Xianlong Wang, Jana Qiao, Song Cao, Francesca Petralia, Emily Kawaler, Filip Mundt, Karsten Krug, Zhidong Tu, Jonathan T. Lei, Michael L. Gatza, Matthew D. Wilkerson, Charles M. Perou, Venkata Yellapantula, Kuan-lin Huang, Chenwei Lin, Michael D. McLellan, Ping Yan, Sherri R. Davies, R. Reid Townsend, Steven J. Skates, Jing Wang, Bing Zhang, Christopher R. Kinsinger, Mehdi Mesri, Henry Rodriguez, Li Ding, Amanda G. Paulovich, David Fenyö, Matthew J. Ellis, Steven A. Carr - Nature 2016 cited by 1,801
- Proteogenomic Analysis of Human Colon Cancer Reveals New Therapeutic Opportunities
Authors: Suhas Vasaikar, Chen Huang, Xiaojing Wang, Vladislav Petyuk, Sara R. Savage, Bo Wen, Yongchao Dou, Yun Zhang, Zhiao Shi, Osama A. Arshad, Marina A. Gritsenko, Lisa J. Zimmerman, Jason McDermott, Therese RW Clauss, Ronald Moore, Rui Zhao, Matthew Monroe, Yi-Ting Wang, Matthew Chambers, Robbert J.C. Slebos, Ken S. Lau, Qianxing Mo, Li Ding, Matthew J. Ellis, Mathangi Thiagarajan, Christopher R. Kinsinger, Henry Rodriguez, Richard Smith, Karin Rodland, D.C. Liebler, Tao Liu, Bing Zhang, Akhilesh Pandey, Amanda G. Paulovich, Andrew N. Hoofnagle, D.R. Mani, Daniel W. Chan, David F. Ransohoff, David Fenyö, David L. Tabb, Douglas A. Levine, Emily S. Boja, Eric Kuhn, Forest M. White, Gordon A. Whiteley, Heng Zhu, Hui Zhang, Ie‐Ming Shih, Jasmin Bavarva, Jeffrey R. Whiteaker, Karen A. Ketchum, Karl R. Clauser, Kelly V. Ruggles, Kimberly Elburn, Linda I. Hannick, Mark A. Watson, Mauricio Oberti, Mehdi Mesri, Melinda E. Sanders, Melissa Borucki, Michael A. Gillette, M Snyder, Nathan Edwards, Negin Vatanian, Paul A. Rudnick, Peter B. McGarvey, Philip Mertins, R. Reid Townsend, Ratna R. Thangudu, Robert Rivers, Samuel Payne, Sherri R. Davies, Shuang Cai, Stephen E. Stein, Steven A. Carr, Steven J. Skates, Subha Madhavan, Tara Hiltke, Xian Chen, Yingming Zhao, Yue Wang, Zhen Zhang - Cell 2019 cited by 862
- Integrated Proteogenomic Characterization of Clear Cell Renal Cell Carcinoma
Authors: David Clark, Saravana M. Dhanasekaran, Francesca Petralia, Jianbo Pan, Xiaoyu Song, Yingwei Hu, Felipe da Veiga Leprevost, Boris Reva, T. Mamie Lih, Hui-Yin Chang, Weiping Ma, Chen Huang, Christopher J. Ricketts, Lijun Chen, Azra Krek, Yize Li, Dmitry Rykunov, Qing Kay Li, Lin S. Chen, Umut Özbek, Suhas Vasaikar, Yige Wu, Seungyeul Yoo, Shrabanti Chowdhury, Matthew A. Wyczalkowski, Jiayi Ji, Michael Schnaubelt, Andy T. Kong, Sunantha Sethuraman, Dmitry M. Avtonomov, Minghui Ao, Antonio Colaprico, Song Cao, Kyung-Cho Cho, Selim Kalaycı, Shiyong Ma, Wenke Liu, Kelly V. Ruggles, Anna Calinawan, Zeynep H. Gümüş, Daniel Geiszler, Emily Kawaler, Guo Ci Teo, Bo Wen, Yuping Zhang, Sarah Keegan, Kai Li, Feng Chen, Nathan Edwards, Phillip M. Pierorazio, Xi Chen, Christian P. Pavlovich, A. Ari Hakimi, Gabriel Bromiński, James J. Hsieh, Andrzej Antczak, Tatiana Omelchenko, Jan Lubiński, Maciej Wiznerowicz, W. Marston Linehan, Christopher R. Kinsinger, Mathangi Thiagarajan, Emily S. Boja, Mehdi Mesri, Tara Hiltke, Ana I. Robles, Henry Rodriguez, Jiang Qian, David Fenyö, Bing Zhang, Li Ding, Eric E. Schadt, Arul M. Chinnaiyan, Zhen Zhang, Gilbert S. Omenn, Marcin Cieślik, Daniel W. Chan, Alexey I. Nesvizhskii, Pei Wang, Hui Zhang, A. Samad Hashimi, Alexander R. Pico, Alla Y. Karpova, Alyssa Charamut, Amanda G. Paulovich, Amy M. Perou, Anna Malovannaya, Annette Marrero-Oliveras, Anupriya Agarwal, Barbara Hindenach, Barbara L. Pruetz, Beom‐Jun Kim, Brian Druker, Chelsea J. Newton, Chet Birger, Corbin D. Jones, Cristina E. Tognon, D.R. Mani, Dana R. Valley, Daniel C. Rohrer and 124 more - Cell 2019 cited by 784
- Proteogenomic Landscape of Breast Cancer Tumorigenesis and Targeted Therapy
Authors: Karsten Krug, Eric J. Jaehnig, Shankha Satpathy, Lili M. Blumenberg, Alla Y. Karpova, Meenakshi Anurag, George Miles, Philipp Mertins, Yifat Geffen, Lauren C. Tang, David I. Heiman, Song Cao, Yosef E. Maruvka, Jonathan T. Lei, Chen Huang, Ramani Kothadia, Antonio Colaprico, Chet Birger, Jarey H. Wang, Yongchao Dou, Bo Wen, Zhiao Shi, Yuxing Liao, Maciej Wiznerowicz, Matthew A. Wyczalkowski, Xi Chen, Jacob J. Kennedy, Amanda G. Paulovich, Mathangi Thiagarajan, Christopher R. Kinsinger, Tara Hiltke, Emily S. Boja, Mehdi Mesri, Ana I. Robles, Henry Rodriguez, Thomas F. Westbrook, Li Ding, Gad Getz, Karl R. Clauser, David Fenyö, Kelly V. Ruggles, Bing Zhang, D.R. Mani, Steven A. Carr, Matthew J. Ellis, Michael A. Gillette, Shayan C. Avanessian, Shuang Cai, Daniel Chan, Xian Chen, Nathan Edwards, Andrew N. Hoofnagle, M. Harry Kane, Karen A. Ketchum, Eric Kuhn, Douglas A. Levine, Shunqiang Li, D.C. Liebler, Tao Liu, Jingqin Luo, Subha Madhavan, Christopher G. Maher, Jason McDermott, Peter B. McGarvey, Mauricio Oberti, Akhilesh Pandey, Samuel Payne, David F. Ransohoff, Robert Rivers, Karin Rodland, Paul A. Rudnick, Melinda E. Sanders, Kenna M. Shaw, Ie‐Ming Shih, Robbert J.C. Slebos, Richard Smith, M Snyder, Stephen E. Stein, David L. Tabb, Ratna R. Thangudu, Stefani N. Thomas, Yue Wang, Forest M. White, Jeffrey R. Whiteaker, Gordon A. Whiteley, Hui Zhang, Zhen Zhang, Yingming Zhao, Heng Zhu, Lisa J. Zimmerman - Cell 2020 cited by 575
- Lenalidomide induces ubiquitination and degradation of CK1α in del(5q) MDS
Authors: Jan Krönke, Emma C. Fink, Paul W. Hollenbach, Kyle J. MacBeth, Slater N. Hurst, Namrata D. Udeshi, Philip P. Chamberlain, D.R. Mani, Hon Wah Man, Anita K. Gandhi, Tanya Svinkina, Rebekka K. Schneider, Marie McConkey, Marcus Järås, Elizabeth A. Griffiths, Meir Wetzler, Lars Bullinger, Brian E. Cathers, Steven A. Carr, Rajesh Chopra, Benjamin L. Ebert - Nature 2015 cited by 848
- Integrated Proteogenomic Characterization of Human High-Grade Serous Ovarian Cancer
Authors: Hui Zhang, Tao Liu, Zhen Zhang, Samuel Payne, Bai Zhang, Jason McDermott, Jianying Zhou, Vladislav Petyuk, Li Chen, Debjit Ray, Shisheng Sun, Feng Yang, Lijun Chen, Jing Wang, Punit Shah, Seong Won, Paul Aiyetan, Sunghee Woo, Yuan Tian, Marina A. Gritsenko, Therese RW Clauss, Caitlin H. Choi, Matthew Monroe, Stefani N. Thomas, Song Nie, Chaochao Wu, Ronald Moore, Kun‐Hsing Yu, David L. Tabb, David Fenyö, Vineet Bafna, Yue Wang, Henry Rodriguez, Emily S. Boja, Tara Hiltke, Robert Rivers, Lori J. Sokoll, Heng Zhu, Ie‐Ming Shih, Leslie Cope, Akhilesh Pandey, Bing Zhang, M Snyder, Douglas A. Levine, Richard Smith, Daniel W. Chan, Karin Rodland, Steven A. Carr, Michael A. Gillette, Karl R. Klauser, Eric Kuhn, D.R. Mani, Philipp Mertins, Karen A. Ketchum, Ratna R. Thangudu, Shuang Cai, Mauricio Oberti, Amanda G. Paulovich, Jeffrey R. Whiteaker, Nathan Edwards, Peter B. McGarvey, Subha Madhavan, Pei Wang, Daniel W. Chan, Akhilesh Pandey, Ie‐Ming Shih, Hui Zhang, Zhen Zhang, Heng Zhu, Leslie Cope, Gordon A. Whiteley, Steven J. Skates, Forest M. White, Douglas A. Levine, Emily S. Boja, Christopher R. Kinsinger, Tara Hiltke, Mehdi Mesri, Robert Rivers, Henry Rodriguez, Kenna M. Shaw, Stephen E. Stein, David Fenyö, Tao Liu, Jason McDermott, Samuel Payne, Karin Rodland, Richard Smith, Paul A. Rudnick, M Snyder, Yingming Zhao, Xian Chen, David F. Ransohoff, Andrew N. Hoofnagle, D.C. Liebler, Melinda E. Sanders, Zhiao Shi, Robbert J.C. Slebos, David L. Tabb, Bing Zhang and 10 more - Cell 2016 cited by 1,126
- A proteogenomic portrait of lung squamous cell carcinoma
Authors: Shankha Satpathy, Karsten Krug, Pierre M. Jean Beltran, Sara R. Savage, Francesca Petralia, Chandan Kumar‐Sinha, Yongchao Dou, Boris Reva, M. Harry Kane, Shayan C. Avanessian, Suhas Vasaikar, Azra Krek, Jonathan T. Lei, Eric J. Jaehnig, Tatiana Omelchenko, Yifat Geffen, Erik J. Bergstrom, Vasileios Stathias, Karen E. Christianson, David I. Heiman, Marcin Cieślik, Song Cao, Xiaoyu Song, Jiayi Ji, Wenke Liu, Kai Li, Bo Wen, Yize Li, Zeynep H. Gümüş, Myvizhi Esai Selvan, Rama Soundararajan, Tanvi H. Visal, Maria Gabriela Raso, Edwin R. Parra, Özgün Babur, Pankaj Vats, Shankara Anand, Tobias Schraink, MacIntosh Cornwell, Fernanda Martins Rodrigues, Houxiang Zhu, Chia-Kuei Mo, Yuping Zhang, Felipe da Veiga Leprevost, Chen Huang, Arul M. Chinnaiyan, Matthew A. Wyczalkowski, Gilbert S. Omenn, Chelsea J. Newton, Stephan C. Schürer, Kelly V. Ruggles, David Fenyö, Scott D. Jewell, Mathangi Thiagarajan, Mehdi Mesri, Henry Rodriguez, Sendurai A. Mani, Namrata D. Udeshi, Gad Getz, James Suh, Qing Kay Li, Galen Hostetter, Paul K. Paik, Saravana M. Dhanasekaran, Ramaswamy Govindan, Li Ding, Ana I. Robles, Karl R. Clauser, Alexey I. Nesvizhskii, Pei Wang, Steven A. Carr, Bing Zhang, D.R. Mani, Michael A. Gillette, Alexander L. Green, Alfredo Molinolo, Alicia Francis, Amanda G. Paulovich, Andrii Karnuta, Antonio Colaprico, Barbara Hindenach, Barbara L. Pruetz, Bartosz Kubisa, Brian Druker, Carissa A. Huynh, Charles A. Goldthwaite, Chet Birger, Christopher R. Kinsinger, Corbin D. Jones, Dan Rohrer, Dana R. Valley, Daniel W. Chan, David Chesla, Donna E. Hansel, Elena V. Ponomareva, Elizabeth R. Duffy, Eric Burks, Eric E. Schadt, Eugene Fedorov, Eunkyung An and 62 more - Cell 2021 cited by 399
- Proteomic analyses of ECM during pancreatic ductal adenocarcinoma progression reveal different contributions by tumor and stromal cells
Authors: Chenxi Tian, Karl R. Clauser, Daniel Öhlund, Steffen Rickelt, Ying Huang, Mala Gupta, D.R. Mani, Steven A. Carr, David A. Tuveson, Richard O. Hynes - National Academy of Sciences, Proceedings of the National Academy of Sciences 2019 cited by 432
- Pan-cancer analysis of post-translational modifications reveals shared patterns of protein regulation
Authors: Yifat Geffen, Shankara Anand, Yo Akiyama, Tomer M. Yaron, Yizhe Song, Jared L. Johnson, Akshay Govindan, Özgün Babur, Yize Li, Emily M. Huntsman, Liang-Bo Wang, Chet Birger, David I. Heiman, Qing Zhang, Mendy Miller, Yosef E. Maruvka, Nicholas J. Haradhvala, Anna Calinawan, Saveliy Belkin, Alexander Kerelsky, Karl R. Clauser, Karsten Krug, Shankha Satpathy, Samuel Payne, D.R. Mani, Michael A. Gillette, Saravana M. Dhanasekaran, Mathangi Thiagarajan, Mehdi Mesri, Henry Rodriguez, Ana I. Robles, Steven A. Carr, Alexander J. Lazar, François Aguet, Lewis C. Cantley, Li Ding, Gad Getz, Eunkyung An, Meenakshi Anurag, Jasmin Bavarva, Michael J. Birrer, Özgün Babur, Song Cao, Michele Ceccarelli, Daniel W. Chan, Arul M. Chinnaiyan, Hanbyul Cho, Shrabanti Chowdhury, Marcin Cieślik, Antonio Colaprico, Steven A. Carr, Felipe da Veiga Leprevost, Corbin Day, Marcin J. Domagalski, Yongchao Dou, Brian Druker, Nathan Edwards, Matthew J. Ellis, David Fenyö, Steven M. Foltz, Alicia Francis, Tania J González-Robles, Sara J.C. Gosline, Zeynep H. Gümüş, Tara Hiltke, Runyu Hong, Galen Hostetter, Yingwei Hu, Chen Huang, Antonio Iavarone, Eric J. Jaehnig, Scott Jewel, Jiayi Ji, Wen Jiang, Lizabeth Katsnelson, Karen A. Ketchum, Iga Kołodziejczak, Chandan Kumar‐Sinha, Karsten Krug, Jonathan T. Lei, Wen-Wei Liang, Yuxing Liao, Caleb M. Lindgren, Tao Liu, Wenke Liu, Weiping Ma, Wilson McKerrow, Mehdi Mesri, D.R. Mani, Alexey I. Nesvizhskii, Chelsea J. Newton, Robert Oldroyd, Gilbert S. Omenn, Amanda G. Paulovich, Francesca Petralia, Pietro Pugliese, Boris Reva, Karin Rodland, Kelly V. Ruggles, Dmitry Rykunov and 32 more - Cell 2023 cited by 207
- Proteogenomic Characterization of Endometrial Carcinoma
Authors: Yongchao Dou, Emily Kawaler, Daniel Cui Zhou, Marina A. Gritsenko, Chen Huang, Lili M. Blumenberg, Alla Y. Karpova, Vladislav Petyuk, Sara R. Savage, Shankha Satpathy, Wenke Liu, Yige Wu, Chia‐Feng Tsai, Bo Wen, Zhi Li, Song Cao, Jamie Moon, Zhiao Shi, MacIntosh Cornwell, Matthew A. Wyczalkowski, Rosalie Chu, Suhas Vasaikar, Hua Zhou, Qingsong Gao, Ronald Moore, Kai Li, Sunantha Sethuraman, Matthew Monroe, Rui Zhao, David I. Heiman, Karsten Krug, Karl R. Clauser, Ramani Kothadia, Yosef E. Maruvka, Alexander R. Pico, Amanda E. Oliphant, Emily L. Hoskins, Samuel L. Pugh, Sean J.I. Beecroft, David W. Adams, Jonathan C. Jarman, Andy T. Kong, Hui-Yin Chang, Boris Reva, Yuxing Liao, Dmitry Rykunov, Antonio Colaprico, Xi Chen, Andrzej Czekański, Marcin Jędryka, Rafał Matkowski, Maciej Wiznerowicz, Tara Hiltke, Emily S. Boja, Christopher R. Kinsinger, Mehdi Mesri, Ana I. Robles, Henry Rodriguez, David G. Mutch, Katherine C. Fuh, Matthew J. Ellis, Deborah F. DeLair, Mathangi Thiagarajan, D.R. Mani, Gad Getz, Michael S. Noble, Alexey I. Nesvizhskii, Pei Wang, Matthew L. Anderson, Douglas A. Levine, Richard Smith, Samuel Payne, Kelly V. Ruggles, Karin Rodland, Li Ding, Bing Zhang, Tao Liu, David Fenyö, Anupriya Agarwal, Meenakshi Anurag, Dmitry M. Avtonomov, Chet Birger, Michael J. Birrer, Simina M. Boca, William Bocik, Uma Borate, Melissa Borucki, Meghan C. Burke, Shuang Cai, Anna Calinawan, Steven A. Carr, Sonya Carter, Patricia Castro, Sandra Cerda, Michelle Chaikin, Daniel W. Chan, Doug W. Chan, Alyssa Charamut, Feng Chen, Jin Chen and 118 more - Cell 2020 cited by 540
- Reproducible workflow for multiplexed deep-scale proteome and phosphoproteome analysis of tumor tissues by liquid chromatography–mass spectrometry
Authors: Philipp Mertins, Lauren C. Tang, Karsten Krug, David Clark, Marina A. Gritsenko, Lijun Chen, Karl R. Clauser, Therese RW Clauss, Punit Shah, Michael A. Gillette, Vladislav Petyuk, Stefani N. Thomas, D. R. Mani, Filip Mundt, Ronald Moore, Yingwei Hu, Rui Zhao, Michael Schnaubelt, Hasmik Keshishian, Matthew Monroe, Zhen Zhang, Namrata D. Udeshi, D.R. Mani, Sherri R. Davies, R. Reid Townsend, Daniel W. Chan, Richard Smith, Hui Zhang, Tao Liu, Steven A. Carr - Nature Protocols 2018 cited by 529
- Proteogenomic data and resources for pan-cancer analysis
Authors: Yize Li, Yongchao Dou, Felipe da Veiga Leprevost, Yifat Geffen, Anna Calinawan, François Aguet, Yo Akiyama, Shankara Anand, Chet Birger, Song Cao, Rekha Chaudhary, Padmini Chilappagari, Marcin Cieślik, Antonio Colaprico, Daniel Cui Zhou, Corbin Day, Marcin J. Domagalski, Myvizhi Esai Selvan, David Fenyö, Steven M. Foltz, Alicia Francis, Tania J González-Robles, Zeynep H. Gümüş, David I. Heiman, Michael Holck, Runyu Hong, Yingwei Hu, Eric J. Jaehnig, Jiayi Ji, Wen Jiang, Lizabeth Katsnelson, Karen A. Ketchum, Robert J. Klein, Jonathan T. Lei, Wen-Wei Liang, Yuxing Liao, Caleb M. Lindgren, Weiping Ma, Lei Ma, Michael J. MacCoss, Fernanda Martins Rodrigues, Wilson McKerrow, Ngoc B. Nguyen, Robert Oldroyd, Alexander Pilozzi, Pietro Pugliese, Boris Reva, Paul A. Rudnick, Kelly V. Ruggles, Dmitry Rykunov, Sara R. Savage, Michael Schnaubelt, Tobias Schraink, Zhiao Shi, Deepak Singhal, Xiaoyu Song, Erik Storrs, Nadezhda V. Terekhanova, Ratna R. Thangudu, Mathangi Thiagarajan, Liang-Bo Wang, Joshua M. Wang, Ying Wang, Bo Wen, Yige Wu, Matthew A. Wyczalkowski, Xin Yi, Lijun Yao, Xinpei Yi, Hui Zhang, Qing Zhang, Maya Zuhl, Gad Getz, Li Ding, Alexey I. Nesvizhskii, Pei Wang, Ana I. Robles, Bing Zhang, Samuel Payne, Alexander J. Lazar, Amanda G. Paulovich, Antonio Colaprico, Antonio Iavarone, Arul M. Chinnaiyan, Brian Druker, Chandan Kumar‐Sinha, Chelsea J. Newton, Chen Huang, D.R. Mani, Richard Smith, Emily M. Huntsman, Eric E. Schadt, Eunkyung An, Francesca Petralia, Galen Hostetter, Gilbert S. Omenn, Hanbyul Cho, Henry Rodriguez, Hui Zhang, Iga Kołodziejczak and 34 more - Cancer Cell 2023 cited by 233
- Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma
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