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Edoardo Pasolli

Active 2008–2026

95
Papers
21,392
Citations
54
h-index
83
i10-index

Citations

Citations per year for Edoardo Pasolli1938: 2 citations1992: 3 citations1995: 1 citations1999: 1 citations2001: 1 citations2007: 1 citations2009: 5 citations2010: 9 citations2011: 27 citations2012: 51 citations2013: 54 citations2014: 58 citations2015: 60 citations2016: 112 citations2017: 204 citations2018: 263 citations2019: 715 citations2020: 1,091 citations2021: 1,429 citations2022: 1,411 citations2023: 1,160 citations2024: 1,952 citations2025: 1,206 citations2026: 100 citations1939–1991: no citations, so these years are not shown1993–1994: no citations, so these years are not shown1996–1998: no citations, so these years are not shown2000: no citations, so this year is not shown2002–2006: no citations, so these years are not shown2008: no citations, so this year is not shown

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 2,466 citing papers, 18.7% of this breakdownChina: 2,126 citing papers, 16.1% of this breakdownItaly: 693 citing papers, 5.3% of this breakdownUnited Kingdom: 640 citing papers, 4.8% of this breakdownGermany: 595 citing papers, 4.5% of this breakdownFrance: 485 citing papers, 3.7% of this breakdownSpain: 470 citing papers, 3.6% of this breakdownCanada: 410 citing papers, 3.1% of this breakdownNetherlands: 385 citing papers, 2.9% of this breakdownAustralia: 334 citing papers, 2.5% of this breakdownDenmark: 264 citing papers, 2% of this breakdownIreland: 257 citing papers, 1.9% of this breakdown
0%18.7%Other 30.9%

Institutions

Fields

  • Biochemistry, Genetics and Molecular Biology50.9%
  • Medicine17%
  • Engineering7.1%
  • Environmental Science6.2%
  • Agricultural and Biological Sciences5.2%
  • Computer Science3.5%
  • Other10.1%

Topics

  • Gut microbiota and health19%
  • Clostridium difficile and Clostridium perfringens research4.2%
  • Probiotics and Fermented Foods4.1%
  • Genomics and Phylogenetic Studies3.8%
  • Diet and metabolism studies3%
  • Remote-Sensing Image Classification2%
  • Other63.9%

Coauthors

All papers

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  1. Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4

    Authors: Aitor Blanco‐Míguez, Francesco Beghini, Fabio Cumbo, Lauren J. McIver, Kelsey N. Thompson, Moreno Zolfo, Paolo Manghi, Léonard Dubois, Kun D. Huang, Andrew Maltez Thomas, William A. Nickols, Gianmarco Piccinno, Elisa Piperni, Michal Punčochář, Mireia Valles‐Colomer, Adrian Tett, Francesca Giordano, Richard Davies, Jonathan Wolf, Sarah Berry, Tim D. Spector, Eric A. Franzosa, Edoardo Pasolli, Francesco Asnicar, Curtis Huttenhower, Nicola Segata - Nature Biotechnology 2023 cited by 1,347

  2. Extensive Unexplored Human Microbiome Diversity Revealed by Over 150,000 Genomes from Metagenomes Spanning Age, Geography, and Lifestyle

    Authors: Edoardo Pasolli, Francesco Asnicar, Serena Manara, Moreno Zolfo, Nicolai Karcher, Federica Armanini, Francesco Beghini, Paolo Manghi, Adrian Tett, Paolo Ghensi, María Carmen Collado, Benjamin L. Rice, Casey DuLong, Xochitl C. Morgan, Christopher D. Golden, Christopher Quince, Curtis Huttenhower, Nicola Segata - Cell 2019 cited by 1,750

  3. Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation

    Authors: Andrew Maltez Thomas, Paolo Manghi, Francesco Asnicar, Edoardo Pasolli, Federica Armanini, Moreno Zolfo, Francesco Beghini, Serena Manara, Nicolai Karcher, Chiara Pozzi, Sara Gandini, Davide Serrano, Sonia Tarallo, A. Francavilla, Gaetano Gallo, Mario Trompetto, Giulio Ferrero, Sayaka Mizutani, Hirotsugu Shiroma, Satoshi Shiba, Tatsuhiro Shibata, Shinichi Yachida, Takuji Yamada, Jakob Wirbel, Petra Schrotz‐King, Cornelia M. Ulrich, Hermann Brenner, Manimozhiyan Arumugam, Peer Bork, Georg Zeller, Francesca Cordero, Emmanuel Dias‐Neto, João Carlos Setúbal, Adrian Tett, Barbara Pardini, María Rescigno, Levi Waldron, Alessio Naccarati, Nicola Segata - Nature Medicine 2019 cited by 1,058

  4. Prevotella diversity, niches and interactions with the human host

    Authors: Adrian Tett, Edoardo Pasolli, Giulia Masetti, Danilo Ercolini, Nicola Segata - Nature Reviews Microbiology 2021 cited by 738

  5. MetaPhlAn2 for enhanced metagenomic taxonomic profiling

    Authors: Duy Tin Truong, Eric A. Franzosa, Timothy L. Tickle, Matthias Scholz, George Weingart, Edoardo Pasolli, Adrian Tett, Curtis Huttenhower, Nicola Segata - Nature Methods 2015 cited by 2,424

  6. The person-to-person transmission landscape of the gut and oral microbiomes

    Authors: Mireia Valles‐Colomer, Aitor Blanco‐Míguez, Paolo Manghi, Francesco Asnicar, Léonard Dubois, Davide Golzato, Federica Armanini, Fabio Cumbo, Kun D. Huang, Serena Manara, Giulia Masetti, Federica Pinto, Elisa Piperni, Michal Punčochář, Liviana Ricci, Moreno Zolfo, Olivia Farrant, Adriana Gonçalves, Marta Selma‐Royo, Ana G. Binetti, Jimmy E. Becerra, Bei Han, John Lusingu, John Amuasi, Loredana Amoroso, Alessia Visconti, Claire M. Steves, Mario Falchi, Michele Filosi, Adrian Tett, Anna Last, Qian Xu, Nan Qin, Huanlong Qin, Jürgen May, Daniel Eibach, Maria Valeria Corrias, Mirco Ponzoni, Edoardo Pasolli, Tim D. Spector, Enrico Domenici, María Carmen Collado, Nicola Segata - Nature 2023 cited by 451

  7. Mother-to-Infant Microbial Transmission from Different Body Sites Shapes the Developing Infant Gut Microbiome

    Authors: Pamela Ferretti, Edoardo Pasolli, Adrian Tett, Francesco Asnicar, Valentina Gorfer, Sabina Fedi, Federica Armanini, Duy Tin Truong, Serena Manara, Moreno Zolfo, Francesco Beghini, Roberto Bertorelli, Veronica De Sanctis, Ilaria Bariletti, Rosarita Canto, Rosanna Clementi, Marina Cologna, Tiziana Crifò, Giuseppina Cusumano, Stefania Gottardi, Claudia Innamorati, Caterina Masè, Daniela Postai, Daniela Savoi, Sabrina Duranti, Gabriele Andrea Lugli, Leonardo Mancabelli, Francesca Turroni, Chiara Ferrario, Christian Milani, Marta Mangifesta, Rosaria Anzalone, Alice Viappiani, Moran Yassour, Hera Vlamakis, Ramnik J. Xavier, Carmen Maria Collado, Omry Koren, Saverio Tateo, Massimo Soffiati, Anna Pedrotti, Marco Ventura, Curtis Huttenhower, Peer Bork, Nicola Segata - Cell Host & Microbe 2018 cited by 1,324

  8. Mediterranean diet intervention in overweight and obese subjects lowers plasma cholesterol and causes changes in the gut microbiome and metabolome independently of energy intake

    Authors: Victoria Meslier, Manolo Laiola, Henrik M. Roager, Francesca De Filippis, Hugo Roume, Benoît Quinquis, Rosalba Giacco, Ilario Mennella, Rosalia Ferracane, Nicolas Pons, Edoardo Pasolli, Angela A. Rivellese, Lars Ove Dragsted, Paola Vitaglione, S. Dusko Ehrlich, Danilo Ercolini - Gut 2020 cited by 568

  9. Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0

    Authors: Francesco Asnicar, Andrew Maltez Thomas, Francesco Beghini, Claudia Mengoni, Serena Manara, Paolo Manghi, Qiyun Zhu, Mattia Bolzan, Fabio Cumbo, Uyen May, Jon G. Sanders, Moreno Zolfo, Evguenia Kopylova, Edoardo Pasolli, Rob Knight, Siavash Mirarab, Curtis Huttenhower, Nicola Segata - Nature Communications 2020 cited by 897

  10. Microbial strain-level population structure and genetic diversity from metagenomes

    Authors: Duy Tin Truong, Adrian Tett, Edoardo Pasolli, Curtis Huttenhower, Nicola Segata - Genome Research 2017 cited by 951

  11. Accessible, curated metagenomic data through ExperimentHub

    Authors: Edoardo Pasolli, Lucas Schiffer, Paolo Manghi, Audrey Renson, Valerie Obenchain, Duy Tin Truong, Francesco Beghini, Faizan Malik, Marcel Ramos, Jennifer B. Dowd, Curtis Huttenhower, Martin Morgan, Nicola Segata, Levi Waldron - Nature Methods 2017 cited by 560

  12. Reporting guidelines for human microbiome research: the STORMS checklist

    Authors: Chloe Mirzayi, Audrey Renson, Massive Analysis and Quality Control Society, Cesare Furlanello, Susanna‐Assunta Sansone, Fatima Zohra, Shaimaa Elsafoury, Ludwig Geistlinger, Lora J. Kasselman, Kelly Eckenrode, Janneke van de Wijgert, Amy Loughman, Francine Z. Marques, David A. MacIntyre, Manimozhiyan Arumugam, Rimsha Azhar, Francesco Beghini, Kirk Bergstrom, Ami S. Bhatt, Jordan E. Bisanz, Jonathan Braun, Héctor Corrada Bravo, Gregory A. Buck, Frederic D. Bushman, David Casero, Gerard Clarke, María Carmen Collado, Paul D. Cotter, John F. Cryan, Ryan T. Demmer, Suzanne Devkota, Eran Elinav, Juan S. Escobar, Jennifer M. Fettweis, ROBERT FINN, Anthony A. Fodor, Sofia K. Forslund, André Franke, Cesare Furlanello, Jack Gilbert, Elizabeth A. Grice, Benjamin Haibe‐Kains, Scott A. Handley, Pamela Herd, Susan Holmes, Jonathan P. Jacobs, Lisa Karstens, Rob Knight, Dan Knights, Omry Koren, Douglas S. Kwon, Morgan G. I. Langille, Brianna Lindsay, Dermot McGovern, Alice C. McHardy, Shannon K. McWeeney, Noel T. Mueller, Luigi Nezi, Matthew R. Olm, Noah W. Palm, Edoardo Pasolli, Jeroen Raes, Matthew R. Redinbo, Malte Rühlemann, R. Balfour Sartor, Patrick D. Schloss, Lynn M. Schriml, Eran Segal, Michelle Shardell, Thomas J. Sharpton, Ekaterina Smirnova, Harry Sokol, Justin L. Sonnenburg, Sujatha Srinivasan, Louise B. Thingholm, Peter J. Turnbaugh, Vaibhav Upadhyay, Ramona Walls, Paul Wilmes, Takuji Yamada, Georg Zeller, Mingyu Zhang, Ni Zhao, Liping Zhao, Wenjun Bao, Aedín C. Culhane, Viswanath Devanarayan, Joaquı́n Dopazo, Xiaohui Fan, Matthias Fischer, Wendell Jones, Rebecca Kusko, Christopher E. Mason, Tim R. Mercer, Susanna‐Assunta Sansone, Andreas Scherer, Leming Shi, Shraddha Thakkar, Weida Tong, Russ Wolfinger and 6 more - Nature Medicine 2021 cited by 471

  13. Machine Learning Meta-analysis of Large Metagenomic Datasets: Tools and Biological Insights

    Authors: Edoardo Pasolli, Duy Tin Truong, Faizan Malik, Levi Waldron, Nicola Segata - PLoS Computational Biology, PLoS Comput. Biol. 2016 cited by 673

  14. Cross-reactivity between tumor MHC class I–restricted antigens and an enterococcal bacteriophage

    Authors: Aurélie Fluckiger, Romain Daillère, Mohamed Sassi, Barbara S. Sixt, Peng Liu, Friedemann Loos, Corentin Richard, Catherine Rabu, Maryam Tidjani Alou, Anne‐Gaëlle Goubet, Fabien Lemaître, Gladys Ferrere, Lisa Derosa, Connie P.M. Duong, Meriem Messaoudene, Andréanne Gagné, Philippe Joubert, Luisa De Sordi, Laurent Debarbieux, Sylvain Simon, Clara‐Maria Scarlata, Maha Ayyoub, Belinda Palermo, Francesco Facciolo, Romain Boidot, Richard Wheeler, Ivo G. Boneca, Zsófia Sztupinszki, Krisztián Papp, István Csabai, Edoardo Pasolli, Nicola Segata, Carlos López-Otı́n, Zoltán Szállási, Fabrice André, Valerio Iebba, Valentin Quiniou, David Klatzmann, Jacques Bou Khalil, S. Khelaifia, Didier Raoult, Laurence Albigès, Bernard Escudier, Alexander Eggermont, Fathia Mami‐Chouaib, Paola Nisticò, François Ghiringhelli, Bertrand Routy, Nathalie Labarrière, Vincent Cattoir, Guido Kroemer, Laurence Zitvogel - Science 2020 cited by 384

  15. Gut Bacteria Composition Drives Primary Resistance to Cancer Immunotherapy in Renal Cell Carcinoma Patients

    Authors: Lisa Derosa, Bertrand Routy, Marine Fidelle, Valerio Iebba, Laurie Alla, Edoardo Pasolli, Nicola Segata, Aude Desnoyer, Filippo Pietrantonio, Gladys Ferrere, Jean‐Eudes Fahrner, Emmanuelle Le Chatellier, Nicolas Pons, Nathalie Galleron, Hugo Roume, Connie P.M. Duong, Laura Mondragón, Kristina Iribarren, Mélodie Bonvalet, Safae Terrisse, Conrad Rauber, Anne‐Gaëlle Goubet, Romain Daillère, Fabien Lemaître, Anna Reni, Beatrice Casu, Maryam Tidjani Alou, Carolina Alves Costa Silva, Didier Raoult, Karim Fizazi, Bernard Escudier, Guido Kroemer, Laurence Albigès, Laurence Zitvogel - European Urology 2020 cited by 377

  16. The Prevotella copri Complex Comprises Four Distinct Clades Underrepresented in Westernized Populations

    Authors: Adrian Tett, Kun D. Huang, Francesco Asnicar, Hannah Fehlner-Peach, Edoardo Pasolli, Nicolai Karcher, Federica Armanini, Paolo Manghi, Kevin S. Bonham, Moreno Zolfo, Francesca De Filippis, Cara Magnabosco, Richard Bonneau, John Lusingu, John Amuasi, Karl J. Reinhard, Thomas Rattei, Fredrik Boulund, Lars Engstrand, Albert Zink, María Carmen Collado, Dan R. Littman, Daniel Eibach, Danilo Ercolini, Omar Rota‐Stabelli, Curtis Huttenhower, Frank Maixner, Nicola Segata - Cell Host & Microbe 2019 cited by 502

  17. Distinct Genetic and Functional Traits of Human Intestinal Prevotella copri Strains Are Associated with Different Habitual Diets

    Authors: Francesca De Filippis, Edoardo Pasolli, Adrian Tett, Sonia Tarallo, Alessio Naccarati, Maria De Angelis, Erasmo Neviani, Luca Cocolin, Marco Gobbetti, Nicola Segata, Danilo Ercolini - Cell Host & Microbe 2019 cited by 432

  18. Strain-Level Analysis of Mother-to-Child Bacterial Transmission during the First Few Months of Life

    Authors: Moran Yassour, Eeva Jason, Larson Hogstrom, Timothy D. Arthur, Surya Tripathi, Heli Siljander, Jenni Selvenius, Sami Oikarinen, Heikki Hyöty, Suvi Μ. Virtanen, Jorma Ilonen, Pamela Ferretti, Edoardo Pasolli, Adrian Tett, Francesco Asnicar, Nicola Segata, Hera Vlamakis, Eric S. Lander, Curtis Huttenhower, Mikael Knip, Ramnik J. Xavier - Cell Host & Microbe 2018 cited by 496

  19. The food-gut axis: lactic acid bacteria and their link to food, the gut microbiome and human health

    Authors: Francesca De Filippis, Edoardo Pasolli, Danilo Ercolini - FEMS Microbiology Reviews 2020 cited by 305

  20. Specific gut microbiome signatures and the associated pro-inflamatory functions are linked to pediatric allergy and acquisition of immune tolerance

    Authors: Francesca De Filippis, Lorella Paparo, Rita Nocerino, Giusy Della Gatta, Laura R. Carucci, Roberto Russo, Edoardo Pasolli, Danilo Ercolini, Roberto Berni Canani - Nature Communications 2021 cited by 203

  21. Large-scale genome-wide analysis links lactic acid bacteria from food with the gut microbiome

    Authors: Edoardo Pasolli, Francesca De Filippis, Italia Elisa Mauriello, Fabio Cumbo, Aaron M. Walsh, John Leech, Paul D. Cotter, Nicola Segata, Danilo Ercolini - Nature Communications 2020 cited by 359

  22. Cancer Induces a Stress Ileopathy Depending on β-Adrenergic Receptors and Promoting Dysbiosis that Contributes to Carcinogenesis

    Authors: Satoru Yonekura, Safae Terrisse, Carolina Alves Costa Silva, Antoine Lafarge, Valerio Iebba, Gladys Ferrere, Anne-Gaëlle Goubet, Jean-Eudes Fahrner, Imran Lahmar, Kousuke Ueda, Gibrail Mansouri, Eugénie Pizzato, Pierre Ly, Marine Mazzenga, Cassandra Thelemaque, Marine Fidelle, Fanny Jaulin, Jérôme Cartry, Marc Deloger, Marine Aglave, Nathalie Droin, Paule Opolon, Angélique Puget, Fanny Mann, Michel Neunlist, Anne Bessard, Laetitia Aymeric, Tamara Matysiak-Budnik, Jacques Bosq, Paul Hofman, Connie P.M. Duong, Sophie Ugolini, Valentin Quiniou, Sylvie Berrard, Bernhard Ryffel, Oliver Kepp, Guido Kroemer, Bertrand Routy, Leonardo Lordello, Mohamed-Amine Bani, Nicola Segata, Fjodor Yousef Yengej, Hans Clevers, Jean-Yves Scoazec, Edoardo Pasolli, Lisa Derosa, Laurence Zitvogel - Cancer Discovery 2021 cited by 104

  23. Maternal inheritance of bifidobacterial communities and bifidophages in infants through vertical transmission

    Authors: Sabrina Duranti, Gabriele Andrea Lugli, Leonardo Mancabelli, Federica Armanini, Francesca Turroni, Kieran James, Pamela Ferretti, Valentina Gorfer, Chiara Ferrario, Christian Milani, Marta Mangifesta, Rosaria Anzalone, Moreno Zolfo, Alice Viappiani, Edoardo Pasolli, Ilaria Bariletti, Rosarita Canto, Rosanna Clementi, Marina Cologna, Tiziana Crifò, Giuseppina Cusumano, Sabina Fedi, Stefania Gottardi, Claudia Innamorati, Caterina Masè, Daniela Postai, Daniela Savoi, Massimo Soffiati, Saverio Tateo, Anna Pedrotti, Nicola Segata, Douwe van Sinderen, Marco Ventura - Microbiome 2017 cited by 326

  24. Intestinal microbiota influences clinical outcome and side effects of early breast cancer treatment

    Authors: Safae Terrisse, Lisa Derosa, Valerio Iebba, François Ghiringhelli, Inês Vaz-Luís, Guido Kroemer, Marine Fidelle, Stergios Christodoulidis, Nicola Segata, Andrew Maltez Thomas, Anne‐Laure Martin, Aude Sirven, Sibille Everhard, Fanny Aprahamian, Nitharsshini Nirmalathasan, Romy Aarnoutse, Marjolein L. Smidt, Janine Ziemons, Carlos Caldas, Sibylle Loibl, Carsten Denkert, Sylvère Durand, Claudia Iglesias Pérez, Filippo Pietrantonio, Bertrand Routy, Fabrice André, Edoardo Pasolli, Suzette Delaloge, Laurence Zitvogel - Cell Death and Differentiation 2021 cited by 166