Halit Ongen

Active 2007–2025

29
Papers
22,950
Citations
25
h-index
27
i10-index

Citations

Citations per year for Halit Ongen1982: 1 citations1994: 1 citations1996: 1 citations1997: 2 citations1998: 1 citations2002: 3 citations2006: 2 citations2007: 1 citations2008: 9 citations2009: 17 citations2010: 17 citations2011: 39 citations2012: 86 citations2013: 94 citations2014: 154 citations2015: 245 citations2016: 345 citations2017: 456 citations2018: 585 citations2019: 1,403 citations2020: 1,398 citations2021: 1,413 citations2022: 839 citations2023: 602 citations2024: 758 citations2025: 318 citations2026: 20 citations1983–1993: no citations, so these years are not shown1995: no citations, so this year is not shown1999–2001: no citations, so these years are not shown2003–2005: no citations, so these years are not shown

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 4,217 citing papers, 21.9% of this breakdownUnited Kingdom: 1,803 citing papers, 9.3% of this breakdownChina: 1,451 citing papers, 7.5% of this breakdownGermany: 1,032 citing papers, 5.4% of this breakdownNetherlands: 740 citing papers, 3.8% of this breakdownCanada: 733 citing papers, 3.8% of this breakdownAustralia: 670 citing papers, 3.5% of this breakdownSweden: 643 citing papers, 3.3% of this breakdownFrance: 563 citing papers, 2.9% of this breakdownItaly: 545 citing papers, 2.8% of this breakdownSpain: 499 citing papers, 2.6% of this breakdownSwitzerland: 451 citing papers, 2.3% of this breakdown
0%21.9%Other 30.9%

Fields

  • Biochemistry, Genetics and Molecular Biology61.9%
  • Medicine26.8%
  • Neuroscience2.8%
  • Immunology and Microbiology2.4%
  • Computer Science1.3%
  • Agricultural and Biological Sciences1.1%
  • Other3.7%

Topics

  • Genetic Associations and Epidemiology9.7%
  • Bioinformatics and Genomic Networks3.9%
  • RNA modifications and cancer3.5%
  • Epigenetics and DNA Methylation3.4%
  • Cancer-related molecular mechanisms research2.8%
  • RNA Research and Splicing2.6%
  • Other74.1%

Coauthors

All papers

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  1. Genetic effects on gene expression across human tissues

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Nicole A. Teran, Carlos D. Bustamante, Stephen B. Montgomery, Brunilda Balliu, Laure Frésard, Michael J. Gloudemans, Xin Li, Boxiang Liu, Emily K. Tsang, Yuan He, Benjamin J. Strober, Brian Jo, Ariel D. H. Gewirtz, YoSon Park, Christopher D. Brown, Princy Parsana, Amy Z. He, Ashis Saha, Alexis Battle, Stephan Ripke, Anjene Addington, Susan Koester, Ping Guan, Helen M. Moore, Abhi Rao, Philip A. Branton, A. Roger Little, Nicole C. Lockhart, Jeffery P. Struewing, Simona Volpi, Lori E. Brigham, Richard Hasz, Marcus Hunter, Kevin Myer, Bryan Roe, Christopher Johns, Joseph Wheeler, Mark Johnson, Gary Walters, Michael Washington, Gene Kopen, William F. Leinweber, John T. Lonsdale, Alisa McDonald, Bernadette Mestichelli, Michael Salvatore, Saboor Shad, Jeffrey A. Thomas, Jason Bridge, Mark Miklos, Barbara A. Foster, Bryan M. Gillard, Ellen Karasik, Rachna Kumar, Michael T. Moser, Scott D. Jewell, Robert G. Montroy, Daniel C. Rohrer, Dana Valley, Deborah C. Mash, David A. Davis, Leslie Sobin, Mary E. Barcus, Eric R. Gamazon, Nancy J. Cox, Diego Garrido-Martín, Roderic Guigó, Genna Gliner, Buhm Han, Farhad Hormozdiari and 150 more - Nature 2017 cited by 4,727

  2. The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Manuel A. Rivas, Alexis Battle, Sara Mostafavi, Jean Monlong, Michael Sammeth, Marta Melé, Ferrán Reverter, Jakob M. Goldmann, Daphne Koller, Roderic Guigó, Mark I. McCarthy, Emmanouil T. Dermitzakis, Eric R. Gamazon, Hae Kyung Im, Anuar Konkashbaev, Dan L. Nicolae, Nancy J. Cox, Timothée Flutre, Xiaoquan Wen, Matthew Stephens, Jonathan K. Pritchard, Zhidong Tu, Bin Zhang, Tao Huang, Quan Long, Luan Lin, Jialiang Yang, Jun Zhu, Jun Liu, Amanda Brown, Bernadette Mestichelli, Denee Tidwell, Edmund Lo, Mike Salvatore, Saboor Shad, Jeffrey A. Thomas, John T. Lonsdale, Michael T. Moser, Bryan M. Gillard, Ellen Karasik, Kimberly Ramsey, Christopher Choi, Barbara A. Foster, John Syron, Johnell Fleming, Harold I. Magazine, Rick Hasz, Gary Walters, Jason Bridge, Mark Miklos, Susan Sullivan, Laura K. Barker, Heather M. Traino, Maghboeba Mosavel, Laura A. Siminoff, Dana R. Valley, Daniel C. Rohrer, Scott D. Jewell, Philip A. Branton, Leslie H. Sobin, Mary E. Barcus, Liqun Qi, Jeffrey A. McLean, Pushpa Hariharan, Ki Sung Um, Shenpei Wu, David E. Tabor, Charles Shive, Anna M. Smith, Stephen A. Buia and 39 more - Science 2015 cited by 5,736

  3. Exploring the phenotypic consequences of tissue specific gene expression variation inferred from GWAS summary statistics

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Taru Tukiainen, Statistical Methods groups—Analysis Working Group, Nathan S. Abell, Brunilda Balliu, Ruth Barshir, Omer Basha, Alexis Battle, Gireesh K. Bogu, Andrew Brown, Christopher Brown, Stephane E. Castel, Lin Chen, Colby Chiang, Donald F. Conrad, Farhan N. Damani, Joe R. Davis, Olivier Delaneau, Emmanouil T. Dermitzakis, Barbara E. Engelhardt, Eleazar Eskin, Pedro G. Ferreira, Laure Frésard, Eric R. Gamazon, Diego Garrido-Martín, Ariel DH Gewirtz, Genna Gliner, Michael J. Gloudemans, Roderic Guigó, Ira M. Hall, Buhm Han, Yuan He, Farhad Hormozdiari, Cédric Howald, Brian Jo, Eun Yong Kang, Yungil Kim, Sarah Kim-Hellmuth, Tuuli Lappalainen, Gen Li, Xin Li, Boxiang Liu, Serghei Mangul, Mark I. McCarthy, Ian C. McDowell, Pejman Mohammadi, Jean Monlong, Stephen B. Montgomery, Manuel Muñoz-Aguirre, Anne W. Ndungu, Andrew B. Nobel, Meritxell Oliva, Halit Ongen, John Palowitch, Nikolaos Panousis, Panagiotis Papasaikas, YoSon Park, Princy Parsana, A. J. Payne, Christine B. Peterson, Jie Quan, Ferrán Reverter, Chiara Sabatti, Ashis Saha, Michael Sammeth, Alexandra J. Scott, Andrey A. Shabalin, Reza Sodaei, Matthew Stephens, Barbara E. Stranger, Benjamin J. Strober and 164 more - Nature Communications 2018 cited by 1,231

  4. Transcriptome and genome sequencing uncovers functional variation in humans

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Helena Kilpinen, Sergi Beltrán, Marta Gut, Katja Kahlem, Vyacheslav Amstislavskiy, Oliver Stegle, Matti Pirinen, Stephen B. Montgomery, Peter Donnelly, Mark I. McCarthy, Paul Flicek, Tim M. Strom, Hans Lehrach, Stefan Schreiber, Ralf Sudbrak, Ángel Carracedo, Stylianos E. Antonarakis, Robert Häsler, Ann‐Christine Syvänen, Gert‐Jan B. van Ommen, Alvis Brāzma, Thomas Meitinger, Philip Rosenstiel, Roderic Guigó, Marta Gut, Xavier Estivill, Emmanouil T. Dermitzakis - Nature 2013 cited by 2,195

  5. Fast and efficient QTL mapper for thousands of molecular phenotypes

    Authors: , , , , - Bioinformatics, Bioinform. 2015 cited by 720

  6. Genetic variants in novel pathways influence blood pressure and cardiovascular disease risk

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Thor Aspelund, Albert V. Smith, Vilmundur Guðnason, Thor Aspelund, Albert Hofman, María Soler Artigas, Nick Shrine, Louise V. Wain, Martin D. Tobin, André G. Uitterlinden, Najaf Amin, Yurii S. Aulchenko, Cornelia M. van Duijn, M. Arfan Ikram, Eric J.G. Sijbrands, John C. Chambers, Cornelia M. van Duijn, Peter Würtz, Ayşe Demirkan, Albert Hofman, Aaron Isaacs, Gonçalo R. Abecasis, Germaine C. Verwoert, André G. Uitterlinden, Eric J.G. Sijbrands, Joshua C. Bis, Bruce M. Psaty, Lenore Launer, Germaine C. Verwoert, Tamara B. Harris, M. Arfan Ikram, Jian’an Luan, Germaine C. Verwoert, André G. Uitterlinden, Simon Heath, Daniel Levy, Péter Vollenweider, Peter Würtz, Elin Org, Gudrun Veldre, John C. Chambers, Paul Elliott, Weihua Zhang, Gonçalo R. Abecasis, Jennifer L. Bragg‐Gresham, Uwe Völker, Alexander Teumer, Joshua C. Bis, Nicole L. Glazer, Bruce M. Psaty, Tamara B. Harris, Melissa N. Garcia, Lenore J. Launer, Nicole Soranzo, Jing Zhao, Ruth J. F. Loos, Nicholas J. Wareham, Mark Lathrop, Diana Zélénika, Simon Heath, Siim Sõber, Maris Laan, Gudrun Veldre, Elin Org, Halit Ongen, Anuj Goel, Afshin Parsa, Nanette Steinle, Alan R. Shuldiner, Yuri Milaneschi and 246 more - Nature 2011 cited by 2,083

  7. Integrative genomic analysis implicates limited peripheral adipose storage capacity in the pathogenesis of human insulin resistance

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , - Nature Genetics 2016 cited by 609

  8. A complete tool set for molecular QTL discovery and analysis

    Authors: , , , , , - Nature Communications 2017 cited by 425

  9. Using an atlas of gene regulation across 44 human tissues to inform complex disease- and trait-associated variation

    Authors: , , , , , , , , , , , , , , , , , , - Nature Genetics 2018 cited by 488

  10. Passive and active DNA methylation and the interplay with genetic variation in gene regulation

    Authors: , , , , , , , , , , , , , , , , , , , , - eLife 2013 cited by 478

  11. A genome-wide association study in Europeans and South Asians identifies five new loci for coronary artery disease

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Maria Samuel, John Danesh, Danish Saleheen, John C Chambers, Paul Elliott, Weihua Zhang, Weihua Zhang, John C Chambers, Jaspal S. Kooner, Mark Lathrop, Jörg Hager, Simon Heath, Marc Délepine, Kathy Stirrups, Leena Peltonen, Nicole Soranzo, Panos Deloukas, Muhammed Murtaza, Paul Elliott, John Öhrvik, Lasse Folkersen, Angela Silveira, Ferdinand M van 't Hooft, Rona J. Strawbridge, Anders Mälarstig, Per Eriksson, Anders Hamsten, John Öhrvik, Lasse Folkersen, Angela Silveira, Ferdinand M. van’t Hooft, Rona J. Strawbridge, Anders Mälarstig, Per Eriksson, Anders Hamsten, James Scott, Jaspal S. Kooner, Joban Sehmi, Rhian Gwilliam, Sarah Hunt, Sarah Edkins, Emma Gray, Suzannah Bumpstead, Simon Potter, Ann‐Christine Syvänen, Tomas Axelsson, Anders Franco-Cereceda, Anders Gabrielsen, Udo Seedorf, Stephan Rust, Gerd Assmann, Gonçalo R. Abecasis, Nabeel Ahmed, Angad S. Kooner, Mark J. Caulfield, Mark I. McCarthy, Peter Donnelly, Peter Donnelly, Philippe Froguel, Mark I McCarthy, Mark I McCarthy, N. J. Samani, N. J. Samani, Mai‐Lis Hellénius, Gunnar Olsson, Gunnar Olsson, Gianni Tognoni, Simona Barlera, Maria Grazia Franzosi, F. Gori and 32 more - Nature Genetics 2011 cited by 686

  12. Estimating the causal tissues for complex traits and diseases

    Authors: , , , , , - Nature Genetics 2017 cited by 243

  13. Combined genetic and transcriptome analysis of patients with SLE: distinct, targetable signatures for susceptibility and severity

    Authors: , , , , , , , , , , , , , , , - Annals of the Rheumatic Diseases 2019 cited by 148

  14. Chromatin three-dimensional interactions mediate genetic effects on gene expression

    Authors: , , , , , , , , , , , , , , , , , , , , , - Science 2019 cited by 236

  15. SNHG16 is regulated by the Wnt pathway in colorectal cancer and affects genes involved in lipid metabolism

    Authors: , , , , , , , , , , , , , , , , , - Molecular Oncology 2016 cited by 228

  16. Synchronized age-related gene expression changes across multiple tissues in human and the link to complex diseases

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Gad Getz, Andrey A. Shablin, Gen Li, Yi-Hui Zhou, Andrew B. Nobel, Ivan Rusyn, Fred A. Wright, Tuuli Lappalainen, Pedro G. Ferreira, Halit Ongen, Manuel A. Rivas, Alexis Battle, Sara Mostafavi, Jean Monlong, Michael Sammeth, Marta Melé, Ferrán Reverter, Jakob M. Goldmann, Daphne Koller, Roderic Guigó, Mark I. McCarthy, Emmanouil T. Dermitzakis, Eric R. Gamazon, Anuar Konkashbaev, Dan L. Nicolae, Nancy J. Cox, Timothée Flutre, Xiaoquan Wen, Matthew Stephens, Jonathan K. Pritchard, Luan Lin, Jun Liu, Amanda Brown, Bernadette Mestichelli, Denee Tidwell, Edmund Lo, Mike Salvatore, Saboor Shad, Jeffrey A. Thomas, John T. Lonsdale, Christopher Choi, Ellen Karasik, Kimberly Ramsey, Michael T. Moser, Barbara A. Foster, Bryan M. Gillard, John Syron, Johnelle Fleming, Harold I. Magazine, Rick Hasz, Gary Walters, Jason Bridge, Mark Miklos, Susan Sullivan, Laura K. Barker, Heather M. Traino, Magboeba Mosavel, Laura A. Siminoff, Dana R. Valley, Daniel C. Rohrer, Scott Jewel, Philip A. Branton, Leslie H. Sobin, Liqun Qi, Pushpa Hariharan, Shenpei Wu, David E. Tabor, Charles Shive, Anna M. Smith, Stephen A. Buia and 34 more - Scientific Reports 2015 cited by 224

  17. Susceptibility to coronary artery disease and diabetes is encoded by distinct, tightly linked SNPs in the ANRIL locus on chromosome 9p

    Authors: , , , , , , , , , , , , , , , - Human Molecular Genetics 2007 cited by 505

  18. Tissue-Specific Effects of Genetic and Epigenetic Variation on Gene Regulation and Splicing

    Authors: , , , , , , , , , , , , , , , , , , , , - PLoS Genetics 2015 cited by 218

  19. Molecular-Subtype-Specific Biomarkers Improve Prediction of Prognosis in Colorectal Cancer

    Authors: , , , , , , , , , , , , , , , , - Cell Reports 2017 cited by 117

  20. Regulation of HLA class I expression by non-coding gene variations

    Authors: , , , , , , - PLoS Genetics 2022 cited by 23

  21. Genome-Wide Association Identifies Nine Common Variants Associated With Fasting Proinsulin Levels and Provides New Insights Into the Pathophysiology of Type 2 Diabetes

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Anuj Goel, Harvest F. Gu, Momoko Horikoshi, Bo Isomaa, Anne Jackson, Anthony James, Eero Kajantie, J. Kerr–Conte, Teemu Kuulasmaa, Johanna Kuusisto, Ruth J. F. Loos, Jian’an Luan, Konstantinos Makrilakis, Alisa K. Manning, Nicholas G. Martin, Narisu Narisu, Maria Mannila, John Öhrvik, Clive Osmond, Laura Pascoe, Felicity Payne, Avan Aihie Sayer, Bengt Sennblad, Angela Silveira, Alena Stančáková, Kathy Stirrups, Amy J. Swift, Ann‐Christine Syvänen, Tiinamaija Tuomi, Ferdinand M. van 't Hooft, Mark Walker, Michael N. Weedon, Weijia Xie, Björn Zethelius, Halit Ongen, Anders Mälarstig, Jemma C. Hopewell, Danish Saleheen, John C. Chambers, Sarah Parish, John Danesh, Jaspal S. Kooner, Claes‐Göran Östenson, Lars Lind, Cyrus C. Cooper, Manuel Serrano‐Ríos, Ele Ferrannini, Tom Forsén, Robert Clarke, Maria Grazia Franzosi, Udo Seedorf, Hugh Watkins, Philippe Froguel, Toby Johnson, Panos Deloukas, Francis S. Collins, Markku Laakso, Emmanouil T. Dermitzakis, Michael Boehnke, Mark I. McCarthy, Nicholas J. Wareham, Leif Groop, François Pattou, Anna L. Gloyn, George Dedoussis, Valeriya Lyssenko, James B. Meigs, Inês Barroso, Richard M. Watanabe, Erik Ingelsson and 3 more - Diabetes 2011 cited by 370

  22. Cell-type, allelic, and genetic signatures in the human pancreatic beta cell transcriptome

    Authors: , , , , , , , - Genome Research 2013 cited by 183

  23. Putative cis-regulatory drivers in colorectal cancer

    Authors: , , , , , , , , , , , , , , , , , - Nature 2014 cited by 151

  24. Transposable elements mediate genetic effects altering the expression of nearby genes in colorectal cancer

    Authors: , , , , - Nature Communications 2024 cited by 16