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Philipp Bucher

Active 1980–2025

Also published as
Philipp Bücher
110
Papers
21,048
Citations
63
h-index
92
i10-index

Citations

Citations per year for Philipp Bucher1980: 6 citations1981: 13 citations1982: 13 citations1983: 8 citations1984: 7 citations1985: 4 citations1986: 4 citations1987: 11 citations1988: 11 citations1989: 8 citations1990: 12 citations1991: 15 citations1992: 26 citations1993: 22 citations1994: 35 citations1995: 47 citations1996: 115 citations1997: 159 citations1998: 251 citations1999: 294 citations2000: 385 citations2001: 372 citations2002: 460 citations2003: 600 citations2004: 577 citations2005: 508 citations2006: 363 citations2007: 279 citations2008: 218 citations2009: 197 citations2010: 182 citations2011: 132 citations2012: 142 citations2013: 139 citations2014: 132 citations2015: 139 citations2016: 119 citations2017: 85 citations2018: 90 citations2019: 240 citations2020: 285 citations2021: 269 citations2022: 214 citations2023: 140 citations2024: 219 citations2025: 111 citations2026: 3 citations

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 2,844 citing papers, 30% of this breakdownUnited Kingdom: 906 citing papers, 9.5% of this breakdownGermany: 717 citing papers, 7.6% of this breakdownChina: 580 citing papers, 6.1% of this breakdownFrance: 434 citing papers, 4.6% of this breakdownSwitzerland: 401 citing papers, 4.2% of this breakdownCanada: 312 citing papers, 3.3% of this breakdownJapan: 297 citing papers, 3.1% of this breakdownAustralia: 252 citing papers, 2.7% of this breakdownItaly: 242 citing papers, 2.5% of this breakdownSpain: 192 citing papers, 2% of this breakdownIndia: 179 citing papers, 1.9% of this breakdown
0%30%Other 22.5%

Institutions

Fields

  • Biochemistry, Genetics and Molecular Biology66.6%
  • Medicine12.8%
  • Agricultural and Biological Sciences5.8%
  • Immunology and Microbiology4.2%
  • Computer Science4.1%
  • Neuroscience1.4%
  • Other5.1%

Topics

  • Genomics and Phylogenetic Studies6%
  • RNA and protein synthesis mechanisms5.8%
  • Genomics and Chromatin Dynamics4.6%
  • Machine Learning in Bioinformatics4.3%
  • RNA Research and Splicing2.5%
  • Bioinformatics and Genomic Networks2.5%
  • Other74.3%

Coauthors

All papers

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  1. EPD in 2020: enhanced data visualization and extension to ncRNA promoters

    Authors: Patrick Meylan, René Dreos, Giovanna Ambrosini, Romain Groux, Philipp Bucher - Nucleic Acids Research, Nucleic Acids Res. 2019 cited by 105

  2. The eukaryotic promoter database in its 30th year: focus on non-vertebrate organisms

    Authors: René Dreos, Giovanna Ambrosini, Romain Groux, Rouaïda Cavin Périer, Philipp Bucher - Nucleic Acids Research, Nucleic Acids Res. 2016 cited by 309

  3. The Eukaryotic Promoter Database: expansion of EPDnew and new promoter analysis tools

    Authors: René Dreos, Giovanna Ambrosini, Rouaïda Cavin Périer, Philipp Bucher - Nucleic Acids Research, Nucleic Acids Res. 2014 cited by 348

  4. PWMScan: a fast tool for scanning entire genomes with a position-specific weight matrix

    Authors: Giovanna Ambrosini, Romain Groux, Philipp Bucher - Bioinformatics, Bioinform. 2018 cited by 170

  5. SNP2TFBS - a database of regulatory SNPs affecting predicted transcription factor binding site affinity

    Authors: Sunil Kumar, Giovanna Ambrosini, Philipp Bucher - Nucleic Acids Research, Nucleic Acids Res. 2016 cited by 225

  6. PROSITE: A Documented Database Using Patterns and Profiles as Motif Descriptors

    Authors: Christian J. A. Sigrist, Lorenzo Cerutti, Nicolas Hulo, Alexandre Gattiker, Laurent Falquet, Marco Pagni, Amos Bairoch, Philipp Bucher - Briefings in Bioinformatics, Briefings Bioinform. 2002 cited by 940

  7. KRAB–Zinc Finger Proteins and KAP1 Can Mediate Long-Range Transcriptional Repression through Heterochromatin Spreading

    Authors: Anna C. Groner, Sylvain Meylan, Angela Ciuffi, Nadine Zangger, Giovanna Ambrosini, Nicolas Dénervaud, Philipp Bücher, Didier Trono - PLoS Genetics 2010 cited by 382

  8. The InterPro database, an integrated documentation resource for protein families, domains and functional sites

    Authors: Rolf Apweiler, Terri K. Attwood, Amos Bairoch, Alex Bateman, Ewan Birney, Margaret Biswas, Philipp Bucher, Lorenzo Cerutti, Florence Corpet, Michael D. R. Croning, Richard Durbin, Laurent Falquet, Wolfgang Fleischmann, Jérôme Gouzy, Henning Hermjakob, Nicolas Hulo, Inge Jonassen, Daniel Kahn, Alexander Kanapin, Youla Karavidopoulou, Rodrigo Lopez, Beate Marx, Nicola J. Mulder, Thomas M. Oinn, Marco Pagni, Florence Servant, Christian J. A. Sigrist, Evgeni M. Zdobnov - Nucleic Acids Research, Nucleic Acids Res. 2001 cited by 1,091

  9. Chromatin three-dimensional interactions mediate genetic effects on gene expression

    Authors: Olivier Delaneau, Marianna Zazhytska, Christelle Borel, Giuliana Giannuzzi, Guillaume Rey, C. Howald, Sunil Kumar, Halit Ongen, Konstantin Popadin, Daniel Marbach, Giovanna Ambrosini, Deborah Bielser, David L. Hacker, Laura Romanó, Pascale Ribaux, Michael R. Wiederkehr, Emilie Falconnet, Philipp Bücher, Sven Bergmann, Stylianos E. Antonarakis, Alexandre Reymond, Emmanouil T. Dermitzakis - Science 2019 cited by 236

  10. SMiLE-seq identifies binding motifs of single and dimeric transcription factors

    Authors: Alina Isakova, Romain Groux, Michaël Imbeault, Pernille Yde Rainer, Daniel Alpern, Riccardo Dainese, Giovanna Ambrosini, Didier Trono, Philipp Bücher, Bart Deplancke - Nature Methods 2017 cited by 126

  11. EPD and EPDnew, high-quality promoter resources in the next-generation sequencing era

    Authors: René Dreos, Giovanna Ambrosini, Rouaïda Cavin Périer, Philipp Bucher - Nucleic Acids Research, Nucleic Acids Res. 2012 cited by 177

  12. Intraductal xenografts show lobular carcinoma cells rely on their own extracellular matrix and LOXL1

    Authors: George Sflomos, Laura Battista, Patrick Aouad, Fabio De Martino, Valentina Scabia, Athina Stravodimou, Ayyakkannu Ayyanan, Assia Ifticene‐Treboux, RLS, Philipp Bücher, Maryse Fiche, Giovanna Ambrosini, Cathrin Brisken - EMBO Molecular Medicine 2021 cited by 56

  13. Insights gained from a comprehensive all-against-all transcription factor binding motif benchmarking study

    Authors: Giovanna Ambrosini, Ilya E. Vorontsov, Dmitry Penzar, Romain Groux, Oriol Fornés, Daria D. Nikolaeva, Benoît Ballester, Jan Grau, Ivo Große, Vsevolod J. Makeev, Ivan V. Kulakovskiy, Philipp Bücher - Genome biology 2020 cited by 80

  14. UCNEbase - a database of ultraconserved non-coding elements and genomic regulatory blocks

    Authors: Slavica Dimitrieva, Philipp Bucher - Nucleic Acids Research, Nucleic Acids Res. 2012 cited by 130

  15. Contraceptive progestins with androgenic properties stimulate breast epithelial cell proliferation

    Authors: Marie Shamseddin, Fabio De Martino, Céline Constantin, Valentina Scabia, Anne‐Sophie Lancelot, Csaba László, Ayyakkannu Ayyannan, Laura Battista, Wassim Raffoul, Marie‐Christine Gailloud‐Matthieu, Philipp Bücher, Maryse Fiche, Giovanna Ambrosini, George Sflomos, Cathrin Brisken - EMBO Molecular Medicine 2021 cited by 44

  16. DNA Binding Specificity of Different STAT Proteins

    Authors: Georg Ehret, Patrick Reichenbach, Ulrike Schindler, Curt M. Horvath, Stefan Fritz, Markus Nabholz, Philipp Bücher - Journal of Biological Chemistry 2001 cited by 366

  17. A Flexible Motif Search Technique Based on Generalized Profiles

    Authors: Philipp Bucher, Kevin Karplus, Nicolas Moeri, Kay Hofmann - Computers & Chemistry, Comput. Chem. 1996 cited by 321

  18. 1. Multichannel Sequence Analysis Applied to Social Science Data

    Authors: Jacques‐Antoine Gauthier, Éric Widmer, Philipp Bücher, Cédric Notredame - Sociological Methodology 2010 cited by 254

  19. The Transcription Factor Rfx3 Regulates β-Cell Differentiation, Function, and Glucokinase Expression

    Authors: Aouatef Ait‐Lounis, Claire Bonal, Queralt Seguín-Estévez, Christoph D. Schmid, Philipp Bücher, Pedro L. Herrera, Bénédicte Durand, Paolo Meda, Walter Reith - Diabetes 2010 cited by 79

  20. The secreted protease Adamts18 links hormone action to activation of the mammary stem cell niche

    Authors: Dalya Ataca, Patrick Aouad, Céline Constantin, Csaba László, Manfred Beleut, Marie Shamseddin, Renuga Devi Rajaram, Rachel Jeitziner, Timothy J. Mead, Marian Čaikovski, Philipp Bücher, Giovanna Ambrosini, Suneel Apte, Cathrin Brisken - Nature Communications 2020 cited by 73

  21. The Eukaryotic Promoter Database (EPD)

    Authors: Rouaïda Cavin Périer, Viviane Praz, Thomas Junier, Claude Bonnard, Philipp Bucher - Nucleic Acids Research, Nucleic Acids Res. 1998 cited by 288

  22. Common genetic variants associated with Parkinson’s disease display widespread signature of epigenetic plasticity

    Authors: Amit Sharma, Naoki Osato, Hongde Liu, Shailendra Asthana, Tikam Chand Dakal, Giovanna Ambrosini, Philipp Bücher, Ina Schmitt, Ullrich Wüllner - Scientific Reports 2019 cited by 24

  23. Extensive binding of nebulous human transcription factors to genomic dark matter

    Authors: Rozita Razavi, Ali Fathi, Isaac Yellan, Alexander Brechalov, Kaitlin U. Laverty, Arttu Jolma, Aldo Hernández-Corchado, Hong Zheng, Ally Yang, Mihai Albu, Marjan Barazandeh, Chun Hu, Ilya E. Vorontsov, Zain M. Patel, Ivan V. Kulakovskiy, Philipp Bücher, Quaid Morris, Hamed S. Najafabadi, Timothy R. Hughes - 2024 cited by 10

  24. Codebook: sequence specificity and genomic binding of poorly-characterized human transcription factors

    Authors: Arttu Jolma, Kaitlin U. Laverty, Ali Fathi, Ally Yang, Isaac Yellan, Ilya E. Vorontsov, Sachi Inukai, Judith F. Kribelbauer, Antoni J. Gralak, Rozita Razavi, Mihai Albu, Alexander Brechalov, Zain M. Patel, Vladimir Nozdrin, G. A. Meshcheryakov, Andrey Buyan, Ivan Kozin, Sergey Abramov, Alexandr Boytsov, Matthew T. Weirauch, Oriol Fornes, Vsevolod J. Makeev, Jan Grau, Ivo Große, Philipp Bücher, Bart Deplancke, Ivan V. Kulakovskiy, Timothy R. Hughes, Philipp Bücher, Bart Deplancke, Oriol Fornes, Jan Grau, Ivo Große, Timothy R. Hughes, Arttu Jolma, Fedor A. Kolpakov, Ivan V. Kulakovskiy, Vsevolod J. Makeev, Mihai Albu, Marjan Barazandeh, Alexander Brechalov, Zhenfeng Deng, Ali Fathi, Chun Hu, Samuel A. Lambert, Kaitlin U. Laverty, Zain M. Patel, Sara E. Pour, Rozita Razavi, Mikhail Salnikov, Ally Yang, Isaac Yellan, Hong Zheng, G. A. Meshcheryakov, Giovanna Ambrosini, Antoni J. Gralak, Sachi Inukai, Judith F. Kribelbauer, Marie-Luise Plescher, Semyon Kolmykov, Ivan Yevshin, Nikita Gryzunov, Ivan Kozin, Mikhail Nikonov, Vladimir Nozdrin, Arsenii Zinkevich, Katerina Faltejskova, Pavel Kravchenko, Sergey Abramov, Alexandr Boytsov, Vasilii Kamenets, Dmitry Penzar, Anton Vlasov, Ilya E. Vorontsov, Aldo Hernandez-Corchado, Hamed S. Najafabadi, Quaid Morris, Xiaoting Chen, Matthew T. Weirauch - 2024 cited by 9