Jérôme Gouzy
Active 1997–2023
- 59
- Papers
- 18,298
- Citations
- 45
- h-index
- 57
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology50.4%
- Agricultural and Biological Sciences33.5%
- Medicine4.4%
- Environmental Science3.1%
- Immunology and Microbiology2.2%
- Neuroscience1.2%
- Other5.2%
Topics
- Genomics and Phylogenetic Studies9%
- Chromosomal and Genetic Variations3.8%
- Plant Molecular Biology Research3%
- Plant Gene Expression Analysis2.9%
- Legume Nitrogen Fixing Symbiosis2.7%
- Machine Learning in Bioinformatics2.3%
- Other76.3%
Coauthors
- Daniel Kahn11
- Erika Sallet11
- Sébastien Carrère11
- Thomas Schiex11
- Florence Corpet7
- Baptiste Mayjonade5
- Delphine Capela5
- Florence Servant5
- Frederic Debellé5
- Hélène Badouin5
- Jean‐Marc Aury5
- Tatiana Giraud5
- Alfred Pühler4
- Anke Becker4
- Antoine Branca4
- Christine Lelandais‐Brière4
- Emmanuel Courcelle4
- Julie Poulain4
- Ludovic Cottret4
- Pascal Gamas4
- Robert Debuchy4
- Alex Bateman3
- Alexander Kanapin3
- Amos Bairoch3
All papers
- High-quality de novo assembly of the apple genome and methylome dynamics of early fruit development
Authors: Nicolas Daccord, Jean‐Marc Celton, Gareth Linsmith, Claude Becker, Nathalie Choisne, Elio Schijlen, Henri van de Geest, Luca Bianco, Diego Micheletti, Riccardo Velasco, Erica A. Di Pierro, Jérôme Gouzy, D. Jasper G. Rees, Philippe Guérif, Hélène Muranty, Charles-Eric Durel, François Laurens, Yves Lespinasse, Sylvain Gaillard, Sébastien Aubourg, Hadi Quesneville, Detlef Weigel, Eric van de Weg, Michela Troggio, Etienne Bucher - Nature Genetics 2017 cited by 1,055
- The sunflower genome provides insights into oil metabolism, flowering and Asterid evolution
Authors: Hélène Badouin, Jérôme Gouzy, Christopher J. Grassa, Florent Murat, S. Evan Staton, Ludovic Cottret, Christine Lelandais‐Brière, Gregory L. Owens, Sébastien Carrère, Baptiste Mayjonade, Ludovic Legrand, Navdeep Gill, Nolan C. Kane, John E. Bowers, Sariel Hübner, Arnaud Bellec, Aurélie Berard, Hélène Bergès, Nicolas Blanchet, Marie‐Claude Boniface, Dominique Brunel, Olivier Catrice, Nadia Chaidir, Clotilde Claudel, Cécile Donnadieu, Thomas Faraut, Ghislain Fievet, Nicolas Helmstetter, Matthew King, Steven J. Knapp, Zhao Lai, Marie‐Christine Le Paslier, Yannick Lippi, Lolita Lorenzon, Jennifer R. Mandel, Gwenola Marage, Gwenaëlle Marchand, Elodie Marquand, Emmanuelle Bret-Mestries, Evan Morien, Savithri U. Nambeesan, Thuy Nguyen, Prune Pegot-Espagnet, Nicolas Pouilly, Frances Raftis, Erika Sallet, Thomas Schiex, Justine Thomas, Céline Vandecasteele, Didier Varès, Félicity Vear, Sonia Vautrin, Martín Crespi, Brigitte Mangin, John M. Burke, Jérôme Salse, Stéphane Muños, Patrick Vincourt, Loren H. Rieseberg, Nicolas Langlade - Nature 2017 cited by 848
- The Rosa genome provides new insights into the domestication of modern roses
Authors: Olivier Raymond, Jérôme Gouzy, Jérémy Just, Hélène Badouin, Marion Verdenaud, Arnaud Lemainque, Philippe Vergne, Sandrine Moja, Nathalie Choisne, Caroline Pont, Sébastien Carrère, Jean‐Claude Caissard, Arnaud Couloux, Ludovic Cottret, Jean‐Marc Aury, Judit Szécsi, David Latrasse, Mohammed‐Amin Madoui, Léa François, Xiaopeng Fu, Shuhua Yang, Annick Dubois, Florence Piola, Antoine Larrieu, Magali Perez, Karine Labadie, Lauriane Perrier, Benjamin Govetto, Yoan Labrousse, Priscilla Villand, Claudia Bardoux, Véronique Boltz, Céline Lopez‐Roques, Pascal Heitzler, Teva Vernoux, Michiel Vandenbussche, Hadi Quesneville, Adnane Boualem, Abdelhafid Bendahmane, Chang Liu, Manuel Le Bris, Jérôme Salse, Sylvie Baudino, Moussa Benhamed, Patrick Wincker, Mohammed Bendahmane - Nature Genetics 2018 cited by 550
- Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype
Authors: Olivier Jaillon, Jean‐Marc Aury, Frédéric Brunet, Jean‐Louis Petit, Nicole Stange-Thomann, Evan Mauceli, Laurence Bouneau, Cécile Fischer, Catherine Ozouf‐Costaz, Alain Bernot, Sophie Nicaud, David B. Jaffe, Sheila Fisher, Georges Lutfalla, Carole Dossat, Béatrice Segurens, Corinne Da Silva, Marcel Salanoubat, Michael A. Levy, Nathalie Boudet, Sergi Castellano, Véronique Anthouard, Claire Jubin, Vanina Castelli, Michaël Katinka, Benoît Vacherie, Christian Biémont, Zineb Skalli, Laurence Cattolico, Julie Poulain, Véronique de Berardinis, Corinne Cruaud, Simone Duprat, Philippe Brottier, Jean-Pierre Coutanceau, Jérôme Gouzy, Genı́s Parra, Guillaume Lardier, Charles E. Chapple, Kevin McKernan, Paul McEwan, Stephanie Bosak, Manolis Kellis, Jean‐Nicolas Volff, Roderic Guigó, Michael C. Zody, Jill P. Mesirov, Kerstin Lindblad‐Toh, Bruce W. Birren, Chad Nusbaum, Daniel Kahn, Marc Robinson‐Rechavi, Vincent Laudet, Vincent Schächter, Françis Quétier, William Saurin, Claude Scarpelli, Patrick Wincker, Eric S. Lander, Jean Weissenbach, Hugues Roest Crollius - Nature 2004 cited by 2,028
- The Medicago genome provides insight into the evolution of rhizobial symbioses
Authors: Nevin D. Young, Frédéric Debellé, Giles Oldroyd, René Geurts, Steven B. Cannon, Michael K. Udvardi, Vagner A. Benedito, Klaus Mayer, Jérôme Gouzy, Heiko Schoof, Yves Van de Peer, Sebastian Proost, Douglas R. Cook, Blake C. Meyers, M. Spannagl, Foo Cheung, Stéphane De Mita, Vivek Krishnakumar, Heidrun Gundlach, Shiguo Zhou, Joann Mudge, Arvind K. Bharti, Jeremy D. Murray, Marina Naoumkina, Benjamin D. Rosen, Kevin A.T. Silverstein, Haibao Tang, Stéphane Rombauts, Patrick X. Zhao, Peng Zhou, Valérie Barbe, Philippe Bardou, Michael Bechner, Arnaud Bellec, Anne Berger, Hélène Bergès, Shelby Bidwell, Ton Bisseling, Nathalie Choisne, Arnaud Couloux, Roxanne Denny, Shweta Deshpande, Xinbin Dai, Jeff J. Doyle, Anne-Marie Dudez, Andrew Farmer, Stéphanie Fouteau, Carolien Franken, Chrystel Gibelin, John Gish, Steven Goldstein, Álvaro González, Pamela J. Green, Asis Hallab, Marijke Hartog, Axin Hua, Sean Humphray, Dong-Hoon Jeong, Yi Jing, Anika Jöcker, Steve Kenton, Dong-Jin Kim, Kathrin Klee, Hongshing Lai, Chunting Lang, Shaoping Lin, Simone L. Macmil, Ghislaine Magdelenat, Lucy Matthews, Jamison McCorrison, Erin L. Monaghan, Jeong‐Hwan Mun, Fares Z. Najar, Christine Nicholson, Céline Noirot, Majesta O’Bleness, Charles R. Paule, Julie Poulain, Florent Prion, Baifang Qin, Chunmei Qu, Ernest F. Retzel, Claire Riddle, Erika Sallet, Sylvie Samain, Nicolas Samson, Iryna Sanders, Olivier Saurat, Claude Scarpelli, Thomas Schiex, Béatrice Segurens, Andrew Severin, D. Janine Sherrier, Ruihua Shi, Sarah Sims, Susan R. Singer, Senjuti Sinharoy, Lieven Sterck, Agnès Viollet, Bing Bing Wang and 24 more - Nature 2011 cited by 1,307
- Extraction of High-Molecular-Weight Genomic DNA for Long-Read Sequencing of Single Molecules
Authors: Baptiste Mayjonade, Jérôme Gouzy, Cécile Donnadieu, Nicolas Pouilly, William Marande, Caroline Callot, Nicolas Langlade, Stéphane Muños - BioTechniques 2016 cited by 248
- Whole-genome landscape of Medicago truncatula symbiotic genes
Authors: Yann Pécrix, S. Evan Staton, Erika Sallet, Christine Lelandais‐Brière, Sandra Moreau, Sébastien Carrère, Thomas Blein, Marie‐Françoise Jardinaud, David Latrasse, Mohamed Zouine, Margot Zahm, Jonathan Kreplak, Baptiste Mayjonade, Carine Satgé, Magali Perez, Stéphane Cauet, William Marande, Céline Chantry-Darmon, Céline Lopez‐Roques, Olivier Bouchez, Aurélie Berard, Frederic Debellé, Stéphane Muños, Abdelhafid Bendahmane, Hélène Bergès, Andréas Niebel, Julia Buitink, Florian Frugier, Moussa Benhamed, Martín Crespi, Jérôme Gouzy, Pascal Gamas - Nature Plants 2018 cited by 313
- Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita
Authors: Pierre Abad, Jérôme Gouzy, Jean‐Marc Aury, Philippe Castagnone‐Sereno, Étienne Danchin, Emeline Deleury, Laetitia Perfus‐Barbeoch, Véronique Anthouard, François Artiguenave, Vivian Blok, Marie‐Cécile Caillaud, Pedro M. Coutinho, Corinne Da Silva, Francesca De Luca, Florence Deau, Magali Esquibet, Timothée Flutre, Jared V. Goldstone, Noureddine Hamamouch, Tarek Hewezi, Olivier Jaillon, Claire Jubin, Paola Leonetti, Marc Magliano, Tom Maier, Gabriel V. Markov, Paul McVeigh, Graziano Pesole, Julie Poulain, Marc Robinson‐Rechavi, Erika Sallet, Béatrice Segurens, Delphine Steinbach, Tom Tytgat, Edgardo Ugarte, Cyril Van Ghelder, Pasqua Veronico, Thomas J. Baum, Mark Blaxter, T. Bleve‐Zacheo, Eric Davis, Jonathan J. Ewbank, Bruno Favery, Éric Grenier, Bernard Henrissat, John T. Jones, Vincent Laudet, Aaron G. Maule, Hadi Quesneville, Marie-Noëlle Rosso, Thomas Schiex, Geert Smant, Jean Weissenbach, Patrick Wincker - Nature Biotechnology 2008 cited by 1,291
- The InterPro database, an integrated documentation resource for protein families, domains and functional sites
Authors: Rolf Apweiler, Terri K. Attwood, Amos Bairoch, Alex Bateman, Ewan Birney, Margaret Biswas, Philipp Bucher, Lorenzo Cerutti, Florence Corpet, Michael D. R. Croning, Richard Durbin, Laurent Falquet, Wolfgang Fleischmann, Jérôme Gouzy, Henning Hermjakob, Nicolas Hulo, Inge Jonassen, Daniel Kahn, Alexander Kanapin, Youla Karavidopoulou, Rodrigo Lopez, Beate Marx, Nicola J. Mulder, Thomas M. Oinn, Marco Pagni, Florence Servant, Christian J. A. Sigrist, Evgeni M. Zdobnov - Nucleic Acids Research, Nucleic Acids Res. 2001 cited by 1,091
- The genome of Theobroma cacao
Authors: Xavier Argout, Jérôme Salse, Jean‐Marc Aury, Mark J. Guiltinan, Gaëtan Droc, Jérôme Gouzy, Mathilde Allègre, Cristian Chaparro, Thierry Legavre, Siela N. Maximova, Michaël Abrouk, Florent Murat, Olivier Fouet, Julie Poulain, Manuel Ruíz, Yolande Roguet, Maguy Rodier-Goud, José Fernandes Barbosa-Neto, François Sabot, Dave Kudrna, Jetty S. S. Ammiraju, Stephan C. Schuster, John E. Carlson, Erika Sallet, Thomas Schiex, Anne Diévart, Melissa Kramer, Laura Gelley, Zi Shi, Aurélie Bérard, Christopher Viot, Michel Boccara, Ange Marie Risterucci, Valentin Guignon, Xavier Sabau, Michael J. Axtell, Zhaorong Ma, Yufan Zhang, Spencer C. Brown, Mickaël Bourge, Wolfgang Golser, Xiang Song, Didier Clément, Ronan Rivallan, G.Mathias Tahi, Joseph Moroh Akaza, Bertrand Pitollat, Karina Peres Gramacho, Angélique D'Hont, Dominique Brunel, Diógenes Infante, Ismael S. Kébé, Pierre Costet, Rod A. Wing, W. Richard McCombie, Emmanuel Guiderdoni, Françis Quétier, Olivier Panaud, Patrick Wincker, Stéphanie Bocs, Claire Lanaud - Nature Genetics 2010 cited by 778
- Adaptive Horizontal Gene Transfers between Multiple Cheese-Associated Fungi
Authors: Jeanne Ropars, Ricardo C. Rodŕıguez de la Vega, Manuela López‐Villavicencio, Jérôme Gouzy, Erika Sallet, Émilie Dumas, Sandrine Lacoste, Robert Debuchy, Joëlle Dupont, Antoine Branca, Tatiana Giraud - Current Biology 2015 cited by 145
- Multiple recent horizontal transfers of a large genomic region in cheese making fungi
Authors: Kevin Cheeseman, Jeanne Ropars, Pierre Renault, Joëlle Dupont, Jérôme Gouzy, Antoine Branca, Anne‐Laure Abraham, Maurizio Ceppi, Emmanuel Conseiller, Robert Debuchy, Fabienne Malagnac, Anne Goarin, Philippe Silar, Sandrine Lacoste, Erika Sallet, Aaron Bensimon, Tatiana Giraud, Yves Brygoo - Nature Communications 2014 cited by 214
- Evolutionary strata on young mating-type chromosomes despite the lack of sexual antagonism
Authors: Sara Branco, Hélène Badouin, Ricardo C. Rodŕıguez de la Vega, Jérôme Gouzy, Fantin Carpentier, Gabriela Aguileta, Sophie Siguenza, Jean‐Tristan Brandenburg, Marco A. Coelho, Michael E. Hood, Tatiana Giraud - National Academy of Sciences, Proceedings of the National Academy of Sciences 2017 cited by 122
- A High-Quality Grapevine Downy Mildew Genome Assembly Reveals Rapidly Evolving and Lineage-Specific Putative Host Adaptation Genes
Authors: Yann Dussert, Isabelle D. Mazet, Carole Couture, Jérôme Gouzy, Marie-Christine Piron, Claire Kuchly, Olivier Bouchez, Claude Rispe, Pere Mestre, François Delmotte - Genome Biology and Evolution 2019 cited by 89
- The genomics of linkage drag in inbred lines of sunflower
Authors: Kaichi Huang, Mojtaba Jahani, Jérôme Gouzy, Alexandra Legendre, Sébastien Carrère, José M. Lázaro-Guevara, Eric González‐Segovia, Marco Todesco, Baptiste Mayjonade, Nathalie Rodde, Stéphane Cauet, Isabelle Dufau, S. Evan Staton, Nicolas Pouilly, Marie‐Claude Boniface, Camille Tapy, Brigitte Mangin, Alexandra Duhnen, Véronique Gautier, Charles Poncet, Cécile Donnadieu, Tali Mandel, Sariel Hübner, John M. Burke, Sonia Vautrin, Arnaud Bellec, Gregory L. Owens, Nicolas Langlade, Stéphane Muños, Loren H. Rieseberg - National Academy of Sciences, Proceedings of the National Academy of Sciences 2023 cited by 55
- Hybridization and polyploidy enable genomic plasticity without sex in the most devastating plant-parasitic nematodes
Authors: Romain Blanc‐Mathieu, Laetitia Perfus‐Barbeoch, Jean‐Marc Aury, Martine Da Rocha, Jérôme Gouzy, Erika Sallet, Cristina Martin-Jimenez, Marc Bailly‐Bechet, Philippe Castagnone‐Sereno, Jean‐François Flot, Djampa Kozlowski, Julie Cazareth, Arnaud Couloux, Corinne Da Silva, Julie Guy, Yujin Kim, Corinne Rancurel, Thomas Schiex, Pierre Abad, Patrick Wincker, Étienne Danchin - PLoS Genetics 2017 cited by 199
- EuGene: An Automated Integrative Gene Finder for Eukaryotes and Prokaryotes
Authors: Erika Sallet, Jérôme Gouzy, Thomas Schiex - Methods in molecular biology 2019 cited by 68
- APOK3 , a pollen killer antidote in Arabidopsis thaliana
Authors: Matthieu Simon, Stéphanie Durand, Anthony Ricou, Nathalie Vrielynck, Baptiste Mayjonade, Jérôme Gouzy, Roxane Boyer, Fabrice Roux, Christine Camilleri, Françoise Budar - Genetics 2022 cited by 21
- Genome sequence of the plant pathogen Ralstonia solanacearum
Authors: Marcel Salanoubat, Stéphane Genin, François Artiguenave, Jérôme Gouzy, Sophie Mangenot, Matthieu Arlat, Alain Billault, P. Brottier, J.C. Camus, L. Cattolico, Michaël Chandler, Nathalie Choisne, Clotilde Claudel‐Renard, Sébastien Cunnac, Nadia Demange, Christine Gaspin, Muriel Lavie, Annick Moisan, C. Robert, William Saurin, Thomas Schiex, Patricia Siguier, Patricia Thébault, Maureen C. Whalen, Patrick Wincker, Michael A. Levy, J. Weissenbach, Christian Boucher - Nature 2002 cited by 977
- An integrated analysis of plant and bacterial gene expression in symbiotic root nodules using laser‐capture microdissection coupled to RNA sequencing
Authors: Brice Roux, Nathalie Rodde, Marie‐Françoise Jardinaud, Ton Timmers, Laurent Sauviac, Ludovic Cottret, Sébastien Carrère, Erika Sallet, Emmanuel Courcelle, Sandra Moreau, Frederic Debellé, Delphine Capela, Fernanda de Carvalho‐Niebel, Jérôme Gouzy, Claude Bruand, Pascal Gamas - The Plant Journal 2014 cited by 493
- Chaos of Rearrangements in the Mating-Type Chromosomes of the Anther-Smut Fungus Microbotryum lychnidis-dioicae
Authors: Hélène Badouin, Michael E. Hood, Jérôme Gouzy, Gabriela Aguileta, Sophie Siguenza, Michael H. Perlin, Christina A. Cuomo, Cécile Fairhead, Antoine Branca, Tatiana Giraud - Genetics 2015 cited by 104
- InterPro-an integrated documentation resource for protein families, domains and functional sites
Authors: Rolf Apweiler, Teresa K. Attwood, Amos Bairoch, Alex Bateman, Ewan Birney, Margaret Biswas, Philip Bucher, Lorenzo Cerutti, F. Corpet, Mike D. R. Croning, Richard Durbin, Laurent Falquet, Wolfgang Fleischmann, Jérôme Gouzy, Henning Hermjakob, Nicolas Hulo, Inge Jonassen, D. Kahn, Alexander Kanapin, Youla Karavidopoulou, Rodrigo López, Ben Marx, Nicola Mulder, Tom Oinn, Marco Pagni, Florence Servant, Christian J A Sigrist, Evgeny M. Zdobnov - Bioinformatics, Bioinform. 2000 cited by 357
- A Regulatory Network-Based Approach Dissects Late Maturation Processes Related to the Acquisition of Desiccation Tolerance and Longevity of Medicago truncatula Seeds
Authors: Jérôme Verdier, David Lalanne, Sandra Pelletier, Ivone Torres‐Jerez, Karima Righetti, Kaushik Bandyopadhyay, Olivier Leprince, Emilie Châtelain, Benoît Ly Vu, Jérôme Gouzy, Pascal Gamas, Michael K. Udvardi, Julia Buitink - PLANT PHYSIOLOGY 2013 cited by 208
- InterPro: An Integrated Documentation Resource for Protein Families, Domains and Functional Sites
Authors: Nicola J. Mulder, Rolf Apweiler, Terri K. Attwood, Amos Bairoch, Alex Bateman, David Binns, Margaret Biswas, Paul Bradley, Peer Bork, Philipp Bucher, Richard R. Copley, Emmanuel Courcelle, Richard Durbin, Laurent Falquet, Wolfgang Fleischmann, Jérôme Gouzy, Sam Griffiths-Jones, Daniel H. Haft, Henning Hermjakob, Nicolas Hulo, Daniel Kahn, Alexander Kanapin, Maria Krestyaninova, Rodrigo Lopez, Ivica Letunic, Sue Orchard, Marco Pagni, David Peyruc, Chris P. Ponting, Florence Servant, Christian J. A. Sigrist - Briefings in Bioinformatics, Briefings Bioinform. 2002 cited by 175
