Ellen Gelfand
Active 2013–2020
- 13
- Papers
- 25,879
- Citations
- 13
- h-index
- 13
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology60.6%
- Medicine24%
- Neuroscience4.3%
- Computer Science3.3%
- Immunology and Microbiology2.5%
- Chemistry0.9%
- Other4.4%
Topics
- Genetic Associations and Epidemiology5.4%
- Bioinformatics and Genomic Networks4.4%
- Single-cell and spatial transcriptomics3.6%
- RNA modifications and cancer3.6%
- Epigenetics and DNA Methylation2.9%
- RNA Research and Splicing2.7%
- Other77.4%
Coauthors
- Ayellet V. Segrè6
- Casandra A. Trowbridge5
- David S. DeLuca5
- Kristin Ardlie5
- Monkol Lek5
- Daniel G. MacArthur4
- Julian Maller4
- Taru Tukiainen4
- Taylor Young4
- Timothy J. Sullivan4
- Barbara A. Weir3
- Benjamin Iriarte3
- Cameron D. Palmer3
- François Aguet3
- Joel N. Hirschhorn3
- Konrad J. Karczewski3
- Lucas D. Ward3
- Manolis Kellis3
- Pouya Kheradpour3
- Wendy Winckler3
- Yan Meng3
- Alexandra East-Seletsky2
- Andrew B. Nobel2
- Aviad Tsherniak2
All papers
- Next-generation characterization of the Cancer Cell Line Encyclopedia
Authors: Mahmoud Ghandi, Franklin W. Huang, Judit Jané‐Valbuena, Gregory V. Kryukov, Christopher Lo, E. Robert McDonald, Jordi Barretina, Ellen Gelfand, Craig M. Bielski, Haoxin Li, Kevin Hu, Alexander Andreev-Drakhlin, Jaegil Kim, Julian M. Hess, Brian J. Haas, François Aguet, Barbara A. Weir, Michael Rothberg, Brenton R. Paolella, Michael S. Lawrence, Rehan Akbani, Yiling Lu, Hong L. Tiv, Prafulla C. Gokhale, Antoine de Weck, Ali Amin Mansour, Coyin Oh, Juliann Shih, Kevin Hadi, Yanay Rosen, Jonathan Bistline, K. Venkatesan, Anupama Reddy, Dmitriy Sonkin, Manway Liu, Joseph Lehár, Joshua M. Korn, Dale Porter, Michael D. Jones, Javad Golji, Giordano Caponigro, Jordan E. Taylor, Caitlin M. Dunning, Amanda L. Creech, Allison Warren, James M. McFarland, Mahdi Zamanighomi, Audrey Kauffmann, Nicolas Stransky, Marcin Imieliński, Yosef E. Maruvka, Andrew D. Cherniack, Aviad Tsherniak, Francisca Vázquez, Jacob D. Jaffe, Andrew A. Lane, David M. Weinstock, Cory M. Johannessen, Michael Morrissey, Frank Stegmeier, Robert Schlegel, William C. Hahn, Gad Getz, Gordon B. Mills, Jesse S. Boehm, Todd R. Golub, Levi A. Garraway, William R. Sellers - Nature 2019 cited by 3,761
- The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans
Authors: Kristin G. Ardlie, David S. DeLuca, Ayellet V. Segrè, Timothy J. Sullivan, Taylor Young, Ellen Gelfand, Casandra A. Trowbridge, Julian Maller, Taru Tukiainen, Monkol Lek, Lucas D. Ward, Pouya Kheradpour, Benjamin Iriarte, Yan Meng, Cameron D. Palmer, Tõnu Esko, Wendy Winckler, Joel N. Hirschhorn, Manolis Kellis, Daniel G. MacArthur, Gad Getz, Andrey A. Shabalin, Gen Li, Yi‐Hui Zhou, Andrew B. Nobel, Ivan Rusyn, Fred A. Wright, Tuuli Lappalainen, Pedro G. Ferreira, Halit Ongen, Manuel A. Rivas, Alexis Battle, Sara Mostafavi, Jean Monlong, Michael Sammeth, Marta Melé, Ferrán Reverter, Jakob M. Goldmann, Daphne Koller, Roderic Guigó, Mark I. McCarthy, Emmanouil T. Dermitzakis, Eric R. Gamazon, Hae Kyung Im, Anuar Konkashbaev, Dan L. Nicolae, Nancy J. Cox, Timothée Flutre, Xiaoquan Wen, Matthew Stephens, Jonathan K. Pritchard, Zhidong Tu, Bin Zhang, Tao Huang, Quan Long, Luan Lin, Jialiang Yang, Jun Zhu, Jun Liu, Amanda Brown, Bernadette Mestichelli, Denee Tidwell, Edmund Lo, Mike Salvatore, Saboor Shad, Jeffrey A. Thomas, John T. Lonsdale, Michael T. Moser, Bryan M. Gillard, Ellen Karasik, Kimberly Ramsey, Christopher Choi, Barbara A. Foster, John Syron, Johnell Fleming, Harold I. Magazine, Rick Hasz, Gary Walters, Jason Bridge, Mark Miklos, Susan Sullivan, Laura K. Barker, Heather M. Traino, Maghboeba Mosavel, Laura A. Siminoff, Dana R. Valley, Daniel C. Rohrer, Scott D. Jewell, Philip A. Branton, Leslie H. Sobin, Mary E. Barcus, Liqun Qi, Jeffrey A. McLean, Pushpa Hariharan, Ki Sung Um, Shenpei Wu, David E. Tabor, Charles Shive, Anna M. Smith, Stephen A. Buia and 39 more - Science 2015 cited by 5,736
- Quantitative Proteomics of the Cancer Cell Line Encyclopedia
Authors: David P. Nusinow, John Szpyt, Mahmoud Ghandi, Christopher M. Rose, E. Robert McDonald, Marian Kalocsay, Judit Jané‐Valbuena, Ellen Gelfand, Devin K. Schweppe, Mark P. Jedrychowski, Javad Golji, Dale Porter, Tomáš Rejtar, Yan Wang, Gregory V. Kryukov, Frank Stegmeier, Brian K. Erickson, Levi A. Garraway, William R. Sellers, Steven P. Gygi - Cell 2020 cited by 1,061
- Exploring the phenotypic consequences of tissue specific gene expression variation inferred from GWAS summary statistics
Authors: Alvaro Barbeira, Scott Dickinson, Rodrigo Bonazzola, Jiamao Zheng, Heather E. Wheeler, Jason Torres, Eric S. Torstenson, Kaanan P. Shah, Tzintzuni Garcia, Todd L. Edwards, Eli A. Stahl, Laura M. Huckins, François Aguet, Kristin Ardlie, Beryl B. Cummings, Ellen Gelfand, Gad Getz, Kane Hadley, Robert E. Handsaker, Katherine Huang, Seva Kashin, Konrad J. Karczewski, Monkol Lek, Xiao Li, Daniel G. MacArthur, Jared L. Nedzel, Duyen T. Nguyen, Michael S. Noble, Ayellet V. Segrè, Casandra A. Trowbridge, Taru Tukiainen, Statistical Methods groups—Analysis Working Group, Nathan S. Abell, Brunilda Balliu, Ruth Barshir, Omer Basha, Alexis Battle, Gireesh K. Bogu, Andrew Brown, Christopher Brown, Stephane E. Castel, Lin Chen, Colby Chiang, Donald F. Conrad, Farhan N. Damani, Joe R. Davis, Olivier Delaneau, Emmanouil T. Dermitzakis, Barbara E. Engelhardt, Eleazar Eskin, Pedro G. Ferreira, Laure Frésard, Eric R. Gamazon, Diego Garrido-Martín, Ariel DH Gewirtz, Genna Gliner, Michael J. Gloudemans, Roderic Guigó, Ira M. Hall, Buhm Han, Yuan He, Farhad Hormozdiari, Cédric Howald, Brian Jo, Eun Yong Kang, Yungil Kim, Sarah Kim-Hellmuth, Tuuli Lappalainen, Gen Li, Xin Li, Boxiang Liu, Serghei Mangul, Mark I. McCarthy, Ian C. McDowell, Pejman Mohammadi, Jean Monlong, Stephen B. Montgomery, Manuel Muñoz-Aguirre, Anne W. Ndungu, Andrew B. Nobel, Meritxell Oliva, Halit Ongen, John Palowitch, Nikolaos Panousis, Panagiotis Papasaikas, YoSon Park, Princy Parsana, A. J. Payne, Christine B. Peterson, Jie Quan, Ferrán Reverter, Chiara Sabatti, Ashis Saha, Michael Sammeth, Alexandra J. Scott, Andrey A. Shabalin, Reza Sodaei, Matthew Stephens, Barbara E. Stranger, Benjamin J. Strober and 164 more - Nature Communications 2018 cited by 1,231
- Massively parallel single-nucleus RNA-seq with DroNc-seq
Authors: Naomi Habib, Inbal Avraham‐Davidi, Anindita Basu, Tyler Burks, Karthik Shekhar, Matan Hofree, Sourav Choudhury, François Aguet, Ellen Gelfand, Kristin Ardlie, David A. Weitz, Orit Rozenblatt–Rosen, Feng Zhang, Aviv Regev - Nature Methods 2017 cited by 1,193
- A Novel Approach to High-Quality Postmortem Tissue Procurement: The GTEx Project
Authors: Latarsha J. Carithers, Kristin Ardlie, Mary E. Barcus, Philip A. Branton, Angela Britton, Stephen A. Buia, Carolyn C. Compton, David S. DeLuca, Joanne Peter-Demchok, Ellen Gelfand, Ping Guan, Greg E. Korzeniewski, Nicole C. Lockhart, Chana A. Rabiner, Abhi K. Rao, Karna Robinson, Nancy Roche, Sherilyn J. Sawyer, Ayellet V. Segrè, Charles Shive, Anna M. Smith, Leslie H. Sobin, Anita H. Undale, Kimberly M. Valentino, Jim Vaught, Taylor Young, Helen M. Moore - Biopreservation and Biobanking 2015 cited by 930
- The Genotype-Tissue Expression (GTEx) project.
Authors: John T. Lonsdale, Jeffrey A. Thomas, Mike Salvatore, Rebecca Phillips, Edmund Lo, Saboor Shad, Richard Hasz, Gary Walters, Fernando U. Garcia, Nancy Young, Barbara A. Foster, Mike Moser, Ellen Karasik, Bryan M. Gillard, Kimberley D. Ramsey, Susan Sullivan, Jason Bridge, Harold I. Magazine, John Syron, Johnelle Fleming, Laura A. Siminoff, Heather M. Traino, Maghboeba Mosavel, Laura K. Barker, Scott D. Jewell, Dan Rohrer, Dan Maxim, Dana Filkins, P.R. Harbach, Eddie Cortadillo, Bree D. Berghuis, Lisa Turner, Eric A. Hudson, Kristin Feenstra, Leslie H. Sobin, J Robb, Phillip Branton, Greg E. Korzeniewski, Charles Shive, David E. Tabor, Liqun Qi, Kevin Groch, Sreenath Nampally, Steve Buia, Angela Zimmerman, Anna M. Smith, Robin Burges, Karna Robinson, Kim Valentino, Deborah Bradbury, Mark Cosentino, Norma Diaz-Mayoral, Mary Kennedy, Theresa Engel, Penelope Williams, Kenyon Erickson, Kristin G. Ardlie, Wendy Winckler, Gad Getz, David S. DeLuca, Daniel G. MacArthur, Manolis Kellis, Alexander Thomson, Taylor Young, Ellen Gelfand, Molly Donovan, Yan Meng, George Grant, Deborah C. Mash, Yvonne Marcus, Margaret J. Basile, Jun Liu, Jun Zhu, Zhidong Tu, Nancy J. Cox, Dan L. Nicolae, Eric R. Gamazon, Hae Kyung Im, Anuar Konkashbaev, Jonathan K. Pritchard, Matthew Stevens, Timothée Flutre, Xiaoquan Wen, Emmanouil T. Dermitzakis, Tuuli Lappalainen, Roderic Guigó, Jean Monlong, Michael Sammeth, Daphne Koller, Alexis Battle, Sara Mostafavi, Mark I. McCarthy, Manual Rivas, Julian Maller, Ivan Rusyn, Andrew B. Nobel, Fred A. Wright, Andrey A. Shabalin, Mike Feolo, Nataliya Sharopova and 27 more - Nature Genetics 2013 cited by 10,010
- Effect of predicted protein-truncating genetic variants on the human transcriptome
Authors: Manuel A. Rivas, Matti Pirinen, Donald F. Conrad, Monkol Lek, Emily K. Tsang, Konrad J. Karczewski, Julian Maller, Kimberly R. Kukurba, David S. DeLuca, Menachem Fromer, Pedro G. Ferreira, Kevin S. Smith, Rui Zhang, Fengmei Zhao, Eric Banks, Ryan Poplin, Douglas M. Ruderfer, Shaun Purcell, Taru Tukiainen, Eric Vallabh Minikel, Peter D. Stenson, D.N. Cooper, Katharine H. Huang, Timothy J. Sullivan, Jared L. Nedzel, Carlos D. Bustamante, Jin Billy Li, Mark J. Daly, Roderic Guigó, Peter Donnelly, Kristin Ardlie, Michael Sammeth, Emmanouil T. Dermitzakis, Mark I. McCarthy, Stephen B. Montgomery, Tuuli Lappalainen, Daniel G. MacArthur, Ayellet V. Segrè, Taylor Young, Ellen Gelfand, Casandra A. Trowbridge, Lucas D. Ward, Pouya Kheradpour, Benjamin Iriarte, Yan Meng, Cameron D. Palmer, Tõnu Esko, Wendy Winckler, Joel N. Hirschhorn, Manolis Kellis, Gad Getz, Andrey A. Shablin, Gen Li, Yi‐Hui Zhou, Andrew B. Nobel, Ivan Rusyn, Fred A. Wright, Alexis Battle, Sara Mostafavi, Marta Melé, Ferrán Reverter, Jakob M. Goldmann, Daphne Koller, Eric R. Gamazon, Hae Kyung Im, Anuar Konkashbaev, Dan L. Nicolae, Nancy J. Cox, Timothe Flutre, Xiaoquan Wen, Matthew Stephens, Jonathan K. Pritchard, Zhidong Tu, Bin Zhang, Tao Huang, Quan Long, Luan Lin, Jialiang Yang, Jun Zhu, Jun S. Liu, Amanda Brown, Bernadette Mestichelli, Denee Tidwell, Edmund Lo, Mike Salvatore, Saboor Shad, Jeffrey A. Thomas, John T. Lonsdale, Roswell Christopher Choi, Ellen Karasik, Kimberly Ramsey, Michael T. Moser, Barbara A. Foster, Bryan M. Gillard, John Syron, Johnelle Fleming, Harold I. Magazine, Rick Hasz, Gary Walters, Jason Bridge and 98 more - Science 2015 cited by 345
- Parallel genome-scale loss of function screens in 216 cancer cell lines for the identification of context-specific genetic dependencies
Authors: Glenn S. Cowley, Barbara A. Weir, Francisca Vázquez, Pablo Tamayo, Justine A. Scott, Scott Rusin, Alexandra East-Seletsky, Levi D. Ali, William FJ Gerath, Sarah E Pantel, Patrick H. Lizotte, Guozhi Jiang, Jessica Hsiao, Aviad Tsherniak, Elizabeth Dwinell, Simon Aoyama, Michael Okamoto, William F. Harrington, Ellen Gelfand, Thomas M Green, Mark J Tomko, Shuba Gopal, Terence C. Wong, Hubo Li, Sara Howell, Nicolas Stransky, Ted Liefeld, Dongkeun Jang, Jonathan Bistline, Barbara Hill Meyers, Scott A Armstrong, Ken C Anderson, Kimberly Stegmaier, Michael Reich, David Pellman, Jesse S. Boehm, Jill P. Mesirov, Todd R. Golub, David E. Root, William C. Hahn - Scientific Data 2014 cited by 413
- Synchronized age-related gene expression changes across multiple tissues in human and the link to complex diseases
Authors: Jialiang Yang, Tao Huang, Francesca Petralia, Quan Long, Bin Zhang, Carmen Argmann, Yong Zhao, Charles V. Mobbs, Eric E. Schadt, Jun Zhu, Zhidong Tu, Kristin Ardlie, David S. DeLuca, Ayellet V. Segrè, Timothy J. Sullivan, Taylor Young, Ellen Gelfand, Casandra A. Trowbridge, Julian Maller, Taru Tukiainen, Monkol Lek, Lucas D. Ward, Pouya Kheradpour, Benjamin Iriarte, Yan Meng, Cameron D. Palmer, Wendy Winckler, Joel N. Hirschhorn, Manolis Kellis, Daniel G. MacArthur, Gad Getz, Andrey A. Shablin, Gen Li, Yi-Hui Zhou, Andrew B. Nobel, Ivan Rusyn, Fred A. Wright, Tuuli Lappalainen, Pedro G. Ferreira, Halit Ongen, Manuel A. Rivas, Alexis Battle, Sara Mostafavi, Jean Monlong, Michael Sammeth, Marta Melé, Ferrán Reverter, Jakob M. Goldmann, Daphne Koller, Roderic Guigó, Mark I. McCarthy, Emmanouil T. Dermitzakis, Eric R. Gamazon, Anuar Konkashbaev, Dan L. Nicolae, Nancy J. Cox, Timothée Flutre, Xiaoquan Wen, Matthew Stephens, Jonathan K. Pritchard, Luan Lin, Jun Liu, Amanda Brown, Bernadette Mestichelli, Denee Tidwell, Edmund Lo, Mike Salvatore, Saboor Shad, Jeffrey A. Thomas, John T. Lonsdale, Christopher Choi, Ellen Karasik, Kimberly Ramsey, Michael T. Moser, Barbara A. Foster, Bryan M. Gillard, John Syron, Johnelle Fleming, Harold I. Magazine, Rick Hasz, Gary Walters, Jason Bridge, Mark Miklos, Susan Sullivan, Laura K. Barker, Heather M. Traino, Magboeba Mosavel, Laura A. Siminoff, Dana R. Valley, Daniel C. Rohrer, Scott Jewel, Philip A. Branton, Leslie H. Sobin, Liqun Qi, Pushpa Hariharan, Shenpei Wu, David E. Tabor, Charles Shive, Anna M. Smith, Stephen A. Buia and 34 more - Scientific Reports 2015 cited by 224
- Genetic effects on gene expression across human tissues
Authors: Eric Haugen, Yuan He, Lin Chen, Emmanouil T. Dermitzakis, Philip A. Branton, Andrew B. Nobel, YoSon Park, Jeffrey A. McLean, Fidencio Neri, David E. Tabor, Ashis Saha, Leslie H. Sobin, Jennifer A. Doherty, Kate R. Rosenbloom, Jie Quan, Benjamin J. Strober, Yaping Liu, Dana R. Valley, Omer Basha, Ruth Barshir, Casandra A. Trowbridge, Ayellet V. Segrè, Andrew D. Skol, Ellen Karasik, Jason Bridge, Wm. Kent, Colby Chiang, Farhan N. Damani, Konrad J. Karczewski, Mary E. Barcus, Meritxell Oliva, Panagiotis Papasaikas, Jemma Nelson, Caroline Linke, Benedict Paten, Ellen Gelfand, Jingchun Zhu, Fred A. Wright, Kevin S. Smith, Jessica Halow, Sarah Kim-Hellmuth, Michael F. Salvatore, Steven Hunter, Michael S. Noble, Mary J. Goldman, Duyen Y. Nguyen, Shilpi Singh, Daniel C. Rohrer, Nancy J. Cox, Peter F. Hickey, Alexis Battle, Melina Claussnitzer, Benoit Molinié, François Aguet, Brunilda Balliu, Jeffrey A. Thomas, Farhad Hormozdiari, Lei Hou, Rajinder Kaul, Christine B. Peterson, W. Marston Linehan, Laura K. Barker, Christopher Brown, Ping Guan, Kristen Lee, Michael J. Gloudemans, Stephan Ripke, Michael T. Moser, Manuel Muñoz-Aguirre, Maximilian Haeussler, Negin Vatanian, Ariel DH Gewirtz, Stephane E. Castel, Jean Monlong, Alexandra J. Scott, J Stamatoyannopoulos, Magali Ruffier, Zachary Zappala, Xiao Li, Pedro G. Ferreira, Concepcion R. Nierras, Esti Yeger‐Lotem, Xiaoquan Wen, Jeffery P. Struewing, Olivier Delaneau, Taru Tukiainen, M. Tomaszewski, Brian Jo, Yong‐Jin Park, Casey Martin, Gireesh K. Bogu, Brandon L. Pierce, Yi‐Hui Zhou, Eleazar Eskin, Ferrán Reverter, Roderic Guigó, Nicole A. Teran, Monkol Lek, William F. Leinweber, Kristin Ardlie and 145 more - 2020 cited by 62
- Erratum: Parallel genome-scale loss of function screens in 216 cancer cell lines for the identification of context-specific genetic dependencies
Authors: Glenn S. Cowley, Barbara A. Weir, Francisca Vázquez, Pablo Tamayo, Justine A. Scott, Scott Rusin, Alexandra East-Seletsky, Levi D. Ali, William FJ Gerath, Sarah E Pantel, Patrick H. Lizotte, Guozhi Jiang, Jessica Hsiao, Aviad Tsherniak, Elizabeth Dwinell, Simon Aoyama, Michael Okamoto, William F. Harrington, Ellen Gelfand, Thomas M Green, Mark J Tomko, Shuba Gopal, Terence C. Wong, Hubo Li, Sara Howell, Nicolas Stransky, Ted Liefeld, Dongkeun Jang, Jonathan Bistline, Barbara Hill Meyers, Scott A Armstrong, Ken C Anderson, Kimberly Stegmaier, Michael Reich, David Pellman, Jesse S. Boehm, Jill P. Mesirov, Todd R. Golub, David E. Root, William C. Hahn - Scientific Data 2014 cited by 191
- Correction: Corrigendum: Synchronized age-related gene expression changes across multiple tissues in human and the link to complex diseases
Authors: Jialiang Yang, Tao Huang, Francesca Petralia, Quan Long, Bin Zhang, Carmen Argmann, Yong Zhao, Charles V. Mobbs, Eric E. Schadt, Jun Zhu, Zhidong Tu, Kristin Ardlie, David S. DeLuca, Ayellet V. Segrè, Timothy J. Sullivan, Taylor Young, Ellen Gelfand, Casandra A. Trowbridge, Julian Maller, Taru Tukiainen, Monkol Lek, Lucas D. Ward, Pouya Kheradpour, Benjamin Iriarte, Yan Meng, Cameron D. Palmer, Wendy Winckler, Joel N. Hirschhorn, Manolis Kellis, Daniel G. MacArthur, Gad Getz, Andrey A. Shablin, Gen Li, Yi‐Hui Zhou, Andrew B. Nobel, Ivan Rusyn, Fred A. Wright, Tuuli Lappalainen, Pedro G. Ferreira, Halit Ongen, Manuel A. Rivas, Alexis Battle, Sara Mostafavi, Jean Monlong, Michael Sammeth, Marta Melé, Ferrán Reverter, Jakob M. Goldmann, Daphne Koller, Roderic Guigó, Mark I. McCarthy, Emmanouil T. Dermitzakis, Eric R. Gamazon, Anuar Konkashbaev, Dan L. Nicolae, Nancy J. Cox, Timothée Flutre, Xiaoquan Wen, Matthew Stephens, Jonathan K. Pritchard, Luan Lin, Jun S. Liu, Amanda Brown, Bernadette Mestichelli, Denee Tidwell, Edmund Lo, Mike Salvatore, Saboor Shad, Jeffrey A. Thomas, John T. Lonsdale, Christopher Choi, Ellen Karasik, Kimberly Ramsey, Michael T. Moser, Barbara A. Foster, Bryan M. Gillard, John Syron, Johnelle Fleming, Harold I. Magazine, Rick Hasz, Gary Walters, Jason Bridge, Mark Miklos, Susan Sullivan, Laura K. Barker, Heather M. Traino, Magboeba Mosavel, Laura A. Siminoff, Dana R. Valley, Daniel C. Rohrer, Scott Jewel, Philip A. Branton, Leslie H. Sobin, Liqun Qi, Pushpa Hariharan, Shenpei Wu, David E. Tabor, Charles Shive, Anna M. Smith, Stephen A. Buia and 34 more - Scientific Reports 2016 cited by 722
All 13 papers shown.
