Jan Aerts
Active 2004–2026
- 73
- Papers
- 19,336
- Citations
- 31
- h-index
- 41
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology59.4%
- Medicine17.7%
- Immunology and Microbiology6.6%
- Agricultural and Biological Sciences4.5%
- Computer Science3.8%
- Neuroscience3.3%
- Other4.7%
Topics
- Single-cell and spatial transcriptomics7.8%
- Genomics and Phylogenetic Studies3.4%
- Bioinformatics and Genomic Networks2.9%
- Genetic and phenotypic traits in livestock2.7%
- Genomic variations and chromosomal abnormalities2.7%
- Genetic Mapping and Diversity in Plants and Animals2.5%
- Other78%
Coauthors
- Ryo Sakai9
- Daniel Alcaide7
- Toshiaki Katayama7
- Daniël M. Bot6
- Jannes Peeters6
- Yves Moreau6
- Alejandro Sifrim5
- Georgios A. Pavlopoulos5
- Raoul Jean Pierre Bonnal5
- Andrew Vande Moere4
- Atsuko Yamaguchi4
- Bruno Aranda4
- C. A. Gill4
- Kazuharu Arakawa4
- Mitsuteru Nakao4
- Naohisa Goto4
- Peiyang Huo4
- Reinhard Schneider4
- Shuichi Kawashima4
- Yasunori Yamamoto4
- Chris Tyler‐Smith3
- Christel Faes3
- Curtis P. Van Tassell3
- Dries Heylen3
All papers
- SCENIC: single-cell regulatory network inference and clustering
Authors: Sara Aibar, Carmen Bravo González‐Blas, Thomas Moerman, Vân Anh Huynh‐Thu, Hana Imrichová, Gert Hulselmans, Florian Rambow, Jean‐Christophe Marine, Pierre Geurts, Jan Aerts, Joost van den Oord, Zeynep Kalender Atak, Jasper Wouters, Stein Aerts - Nature Methods 2017 cited by 6,948
- GRNBoost2 and Arboreto: efficient and scalable inference of gene regulatory networks
Authors: Thomas Moerman, Sara Aibar Santos, Carmen Bravo González-Blas, Jaak Simm, Yves Moreau, Jan Aerts, Stein Aerts - Bioinformatics, Bioinform. 2018 cited by 640
- Using graph theory to analyze biological networks
Authors: Georgios A. Pavlopoulos, Maria Secrier, Charalampos Moschopoulos, Theodoros Soldatos, Σοφία Κοσσίδα, Jan Aerts, Reinhard Schneider, Pantelis G. Bagos - BioData Mining, BioData Min. 2011 cited by 809
- Origins and functional impact of copy number variation in the human genome
Authors: Donald F. Conrad, Dalila Pinto, Richard Redon, Lars Feuk, Ömer Gökçümen, Yujun Zhang, Jan Aerts, T. Daniel Andrews, C. Barnes, Peter J. Campbell, Tomas Fitzgerald, Min Hu, Chun Hwa Ihm, Kati Kristiansson, Daniel G. MacArthur, Jeffrey R. MacDonald, Ifejinelo Onyiah, Andy Wing Chun Pang, Samuel C. Robson, Kathy Stirrups, Armand Valsesia, Klaudia Walter, John Wei, Chris Tyler‐Smith, Nigel P. Carter, Charles Lee, Stephen W. Scherer, Matthew E. Hurles - Nature 2009 cited by 2,062
- The Genome Sequence of Taurine Cattle: A Window to Ruminant Biology and Evolution
Authors: Christine G. Elsik, Ross L. Tellam, Kim C. Worley, Richard A. Gibbs, Donna M. Muzny, George M. Weinstock, David L. Adelson, Evan E. Eichler, Laura Elnitski, Roderic Guigó, Debora L. Hamernik, S M Kappes, Harris A. Lewin, David J. Lynn, F. W. Nicholas, Alexandre Reymond, Monique Rijnkels, Loren C. Skow, Evgeny M. Zdobnov, Lawrence B. Schook, James E. Womack, Tyler Alioto, Stylianos E. Antonarakis, Alex Astashyn, Charles E. Chapple, Hsiu-Chuan Chen, Jacqueline Chrast, Francisco Câmara, Olga Ermolaeva, Charlotte N. Henrichsen, Wratko Hlavina, Yuri Kapustin, Boris Kiryutin, Paul Kitts, Felix Kokocinski, Melissa Landrum, Donna Maglott, Kim D. Pruitt, Victor Sapojnikov, Stephen M. J. Searle, Victor Solovyev, Alexandre Souvorov, Catherine Ucla, Carine Wyss, Juan Manuel Anzola, Daniel Gerlach, Eran Elhaik, Dan Graur, Justin Reese, R. C. Edgar, John C. McEwan, Gemma M. Payne, Joy M Raison, Thomas Junier, Evgenia V. Kriventseva, Eduardo Eyras, Mireya Plass, Ravikiran Donthu, Denis M. Larkin, James M. Reecy, Mary Qu Yang, Lin Chen, Ze Cheng, Carol G. Chitko-McKown, George E. Liu, Lakshmi K. Matukumalli, Jiuzhou Song, Bin Zhu, Daniel G. Bradley, Fiona S. L. Brinkman, Lilian Pek Lian Lau, Matthew D. Whiteside, Angela M. Walker, Thomas T. Wheeler, Theresa Casey, J. Bruce German, Danielle G. Lemay, Nauman J. Maqbool, Adrian Molenaar, Seongwon Seo, Paul Stothard, Cynthia L. Baldwin, R. Baxter, Candice Brinkmeyer‐Langford, Wendy C. Brown, Christopher Childers, Timothy Connelley, Shirley A. Ellis, K. L. Fritz, Elizabeth Glass, Carolyn T.A. Herzig, Antti Iivanainen, Kevin K. Lahmers, Anna K. Bennett, C. Michael Dickens, James Gilbert, Darren E. Hagen, Hanni Salih, Jan Aerts, Alexandre Rodrigues Caetano and 207 more - Science 2009 cited by 1,349
- Genome-Wide Survey of SNP Variation Uncovers the Genetic Structure of Cattle Breeds
Authors: Richard A. Gibbs, Jeremy F. Taylor, Curtis P. Van Tassell, W. Barendse, Kellye A. Eversole, C. A. Gill, Ronnie D. Green, Debora L. Hamernik, Steven M. Kappes, Sigbjørn Lien, Lakshmi K. Matukumalli, John C. McEwan, Lynne V. Nazareth, Robert D. Schnabel, George M. Weinstock, David A. Wheeler, Paolo Ajmone‐Marsan, P. Boettcher, Alexandre Rodrigues Caetano, José Fernando Garcia, Olivier Hanotte, Paola Mariani, Loren C. Skow, Tad S. Sonstegard, J. L. Williams, Boubacar Diallo, Lemecha Hailemariam, M. L. Martinez, Chris Morris, Luiz O. C. Silva, Richard Spelman, Woudyalew Mulatu, Keyan Zhao, Colette A. Abbey, Morris Agaba, Flábio R. Araújo, Rowan J. Bunch, James Burton, C. Gorni, Olivier Hanotte, B. E. Harrison, Bill Luff, Marco Antônio Machado, J. Mwakaya, Graham Plastow, Warren Sim, Timothy D. Smith, Merle B Thomas, Alessio Valentini, Paul J. Williams, James E. Womack, John Woolliams, Yue Liu, Xiang Qin, Kim C. Worley, Chuan Gao, Huaiyang Jiang, S. S. Moore, Yanru Ren, Xingzhi Song, Carlos D. Bustamante, Ryan D. Hernandez, Donna M. Muzny, Shobha Patil, Anthony San Lucas, Qing Fu, Matthew Kent, Richard Vega, Aruna Matukumalli, Sean McWilliam, Gert Sclep, Katarzyna Bryc, Jung-Woo Choi, Hong Gao, John J. Grefenstette, Brenda M. Murdoch, Alessandra Stella, Rafael Villa-Angulo, Mark H. Wright, Jan Aerts, O. Jann, Riccardo Negrini, Mike E. Goddard, Ben J. Hayes, Daniel G. Bradley, Marcos Barbosa da Silva, Lilian Pek Lian Lau, George E. Liu, David J. Lynn, F. Panzitta, K. G. Dodds - Science 2009 cited by 910
- Genome-wide association study of CNVs in 16,000 cases of eight common diseases and 3,000 shared controls
Authors: Elaine Green, Liz Forty, Ian Jones, Michael O‘Donovan, Michael J. Owen, Detelina Grozeva, George Kirov, Liz Forty, Nick Craddock, Ellie Russell, Matthew E. Hurles, Panos Deloukas, Richard Redon, Chris Tyler‐Smith, Kathy Stirrups, Hazel Arbury, C. Barnes, Armand Valsesia, Willem H. Ouwehand, Matthew E. Hurles, Eleanor Howard, Andrew Dunham, Anthony Attwood, Michael L. Mimmack, Dominic Kwiatkowski, Nigel P. Carter, Jan Aerts, Michael A. Quail, Sanjeev S. Bhaskar, Kevin Lewis, Naomi Hammond, Elilan Somaskantharajah, Donald F. Conrad, T. Daniel Andrews, Ifejinelo Onyiah, Chris M. Clee, Husam Hebaishi, Jeffrey C. Barrett, Cordelia F. Langford, John H. Burton, Samuel C. Robson, Sarah Hunt, Rhian Gwilliam, Emma Gray, Kirsten McLay, Carol Scott, Aarno Palotie, Kimmo Palin, Alison J. Coffey, Michael R. Stratton, Inês Barroso, Sarah Edkins, Tomas Fitzgerald, Christopher Yau, Zhan Su, Gil McVean, Niall J. Cardin, Christopher Holmes, Eleni Giannoulatou, Jonathan Marchini, Adam Auton, Simon Myers, Peter Donnelly, Julian Maller, Inga Prokopenko, Jake Byrnes, Richard D. Pearson, Andrew P. Morris, Mahim Jain, Adrian V. S. Hill, Dominic Kwiatkowski, Jake Byrnes, Neil Robertson, Damjan Vukcevic, Mark I. McCarthy, Vincent Plagnol, Oliver S. Burren, Mark I. McCarthy, Vincent Plagnol, Nigel Ovington, Meeta Maisuria-Armer, Joanna M. M. Howson, Jason D. Cooper, Oliver S. Burren, Debbie J. Smyth, Kate Downes, Matthew Woodburn, Neil Walker, John A. Todd, Helen E. Stevens, Chris Wallace, Matt Hardy, Helen Schuilenburg, J. Thompson, Louise V. Wain, Paul R. Burton, Martin D. Tobin, Tariq Ahmad, Nicholas A. Watkins, Jennifer D. Jolley and 117 more - Nature 2010 cited by 818
- Predicting disease-causing variant combinations
Authors: Sofia Papadimitriou, Andrea Gazzo, Nassim Versbraegen, Charlotte Nachtegael, Jan Aerts, Yves Moreau, Sonia Van Dooren, Ann Nowé, Guillaume Smits, Tom Lenaerts - National Academy of Sciences, Proceedings of the National Academy of Sciences 2019 cited by 111
- Duplication of a promiscuous transcription factor drives the emergence of a new regulatory network
Authors: Ksenia Pougach, Arnout Voet, Fyodor A. Kondrashov, Karin Voordeckers, Joaquin F. Christiaens, Bianka Baying, Vladimı́r Beneš, Ryo Sakai, Jan Aerts, Bo Zhu, Patrick Van Dijck, Kevin J. Verstrepen - Nature Communications 2014 cited by 84
- Challenges and Opportunities in Data Visualization Education: A Call to Action
Authors: Benjamin Bach, Mandy Keck, Fateme Rajabiyazdi, Tatiana Losev, Isabel Meirelles, Jason Dykes, Robert S. Laramee, Mashael AlKadi, Christina Stoiber, Samuel Huron, Charles Perin, Luiz Morais, Wolfgang Aigner, Doris Kosminsky, Magdalena Boucher, Søren Knudsen, Areti Manataki, Jan Aerts, Uta Hinrichs, Jonathan C. Roberts, Sheelagh Carpendale - IEEE Transactions on Visualization and Computer Graphics, IEEE Trans. Vis. Comput. Graph. 2023 cited by 52
- Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project
Authors: Chris Taylor, Dawn Field, Susanna‐Assunta Sansone, Jan Aerts, Rolf Apweiler, Michael Ashburner, Catherine A. Ball, Pierre‐Alain Binz, Molly A. Bogue, Tim Booth, Alvis Brāzma, Ryan R. Brinkman, Adam M. Clark, Eric W. Deutsch, Oliver Fiehn, Jennifer Fostel, Peter Ghazal, F. Gibson, Tanya Gray, Graeme R. Grimes, John M. Hancock, Nigel Hardy, Henning Hermjakob, Randall K. Julian, Matthew D. Kane, Carsten Kettner, Christopher R. Kinsinger, Eugene Kolker, Martin Kuiper, Nicolas Le Novère, Jim Leebens‐Mack, Suzanna Lewis, Phillip Lord, Ann‐Marie Mallon, Nishanth Marthandan, Hiroshi Masuya, Ruth McNally, Alexander Mehrle, Norman Morrison, Sandra Orchard, John Quackenbush, James M. Reecy, Donald G. Robertson, Philippe Rocca‐Serra, Henry Rodriguez, Heiko Rosenfelder, Javier Santoyo‐López, Richard H. Scheuermann, Daniel Schober, Barry Smith, Jason Snape, Christian J. Stoeckert, Keith F. Tipton, Peter Sterk, Andreas Untergasser, Jo Vandesompele, Stefan Wiemann - Nature Biotechnology 2008 cited by 562
- dendsort: modular leaf ordering methods for dendrogram representations in R
Authors: Ryo Sakai, Raf Winand, Toni Verbeiren, Andrew Vande Moere, Jan Aerts - F1000Research 2014 cited by 73
- Whole genome linkage disequilibrium maps in cattle
Authors: Stephanie McKay, Robert D. Schnabel, Brenda M. Murdoch, Lakshmi K. Matukumalli, Jan Aerts, Wouter Coppieters, Denny H. Crews, Emmanuel Dias‐Neto, C. A. Gill, Chuan Gao, Hideyuki Mannen, Paul Stothard, Zhiquan Wang, Curtis P. Van Tassell, J. L. Williams, Jeremy F. Taylor, S. S. Moore - BMC Genetics 2007 cited by 259
- Towards Building a Quantitative Proteomics Toolbox in Precision Medicine: A Mini-Review
Authors: Alejandro Correa Rojo, Dries Heylen, Jan Aerts, Olivier Thas, Jef Hooyberghs, Gökhan Ertaylan, Dirk Valkenborg - Frontiers in Physiology 2021 cited by 31
- Designing a Data Visualisation for Interdisciplinary Scientists. How to Transparently Convey Data Frictions?
Authors: Georgia Panagiotidou, Jeroen Poblome, Jan Aerts, Andrew Vande Moere - Computer Supported Cooperative Work (CSCW), Comput. Support. Cooperative Work. 2022 cited by 18
- Encyclopedia of Life Sciences
Authors: Jan Aerts, Chris Tyler‐Smith - 2009 cited by 248
- A physical map of the chicken genome
Authors: John W. Wallis, Jan Aerts, Martien A. M. Groenen, R.P.M.A. Crooijmans, Dan Layman, Tina Graves, Debra E. Scheer, Colin Kremitzki, Mary J. Fedele, Nancy K. Mudd, Marco Cardenas, Jamey Higginbotham, Jason Carter, Rebecca McGrane, Tony Gaige, Kelly Mead, Jason Walker, Derek Albracht, Jonathan Davito, Shiaw‐Pyng Yang, Shin Leong, Asif Chinwalla, Mandeep Sekhon, Kristine M. Wylie, Jerry B. Dodgson, Michael N Romanov, Hans H. Cheng, Pieter J. de Jong, Kazutoyo Osoegawa, Mikhail Nefedov, Hong‐Bin Zhang, John D. McPherson, Martin Krzywinski, Jacquie Schein, LaDeana Hillier, Elaine R. Mardis, Richard K. Wilson, Wesley C. Warren - Nature 2004 cited by 229
- Exome Sequencing and Genetic Testing for MODY
Authors: Stefan Johansson, Henrik Irgens, Kishan Chudasama, Janne Molnes, Jan Aerts, Francisco S. Roque, Inge Jonassen, Shawn Levy, Kari Lima, Per M. Knappskog, Graeme I. Bell, Anders Molven, Pål R. Njølstad - PLoS ONE 2012 cited by 110
- Exploring the Microbiome Analysis and Visualization Landscape
Authors: Jannes Peeters, Olivier Thas, Ziv Shkedy, Leyla Kodalci, Connie Musisi, Olajumoke Evangelina Owokotomo, Aleksandra Dyczko, Ibrahim Hamad, Jaco Vangronsveld, Markus Kleinewietfeld, Sofie Thijs, Jan Aerts - Frontiers in Bioinformatics, Frontiers Bioinform. 2021 cited by 18
- TIEVis: a Visual Analytics Dashboard for Temporal Information Extracted from Clinical Reports
Authors: Robin De Croon, Artuur Leeuwenberg, Jan Aerts, Marie-Francine Moens, Vero Vanden Abeele, Katrien Verbert - International Conference on Intelligent User Interfaces, IUI Companion 2021 cited by 7
- An assessment of population structure in eight breeds of cattle using a whole genome SNP panel
Authors: Stephanie McKay, Robert D. Schnabel, Brenda M. Murdoch, Lakshmi K. Matukumalli, Jan Aerts, Wouter Coppieters, Denny H. Crews, Emmanuel Dias‐Neto, C. A. Gill, Chuan Gao, Hideyuki Mannen, Zhiquan Wang, Curtis P. Van Tassell, J. L. Williams, Jeremy F. Taylor, S. S. Moore - BMC Genetics 2008 cited by 128
- Arena3D: visualizing time-driven phenotypic differences in biological systems
Authors: Maria Secrier, Georgios A. Pavlopoulos, Jan Aerts, Reinhard Schneider - BMC Bioinformatics, BMC Bioinform. 2012 cited by 48
- Spanning Trees as Approximation of Data Structures
Authors: Daniel Alcaide, Jan Aerts - IEEE Transactions on Visualization and Computer Graphics, IEEE Trans. Vis. Comput. Graph. 2020 cited by 9
- FLASC: A Flare-Sensitive Clustering Algorithm: Extending HDBSCAN* for Detecting Branches in Clusters
Authors: D. M. Bot, Peeters, Jannes, Jori Liesenborgs, Jan Aerts - arXiv (Cornell University), CoRR 2023 cited by 2
