litlas
Log inCreate account

Jeffery B. Klauda

Active 2000–2025

66
Papers
20,453
Citations
41
h-index
58
i10-index

Citations

Citations per year for Jeffery B. Klauda1962: 1 citations1973: 1 citations1977: 1 citations1979: 1 citations1996: 3 citations2000: 2 citations2001: 1 citations2002: 3 citations2003: 1 citations2004: 1 citations2005: 6 citations2006: 11 citations2007: 22 citations2008: 24 citations2009: 38 citations2010: 52 citations2011: 45 citations2012: 82 citations2013: 101 citations2014: 144 citations2015: 131 citations2016: 155 citations2017: 166 citations2018: 150 citations2019: 718 citations2020: 804 citations2021: 952 citations2022: 700 citations2023: 601 citations2024: 1,081 citations2025: 558 citations2026: 66 citations1963–1972: no citations, so these years are not shown1974–1976: no citations, so these years are not shown1978: no citations, so this year is not shown1980–1995: no citations, so these years are not shown1997–1999: no citations, so these years are not shown

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 1,940 citing papers, 27% of this breakdownChina: 589 citing papers, 8.2% of this breakdownGermany: 475 citing papers, 6.6% of this breakdownUnited Kingdom: 425 citing papers, 5.9% of this breakdownFrance: 293 citing papers, 4.1% of this breakdownIndia: 242 citing papers, 3.4% of this breakdownJapan: 209 citing papers, 2.9% of this breakdownCanada: 200 citing papers, 2.8% of this breakdownItaly: 173 citing papers, 2.4% of this breakdownSweden: 173 citing papers, 2.4% of this breakdownSpain: 134 citing papers, 1.9% of this breakdownDenmark: 130 citing papers, 1.8% of this breakdown
0%27%Other 30.6%

Institutions

Fields

  • Biochemistry, Genetics and Molecular Biology57.3%
  • Medicine14.1%
  • Immunology and Microbiology5.4%
  • Neuroscience4.5%
  • Computer Science4%
  • Chemistry2.4%
  • Other12.3%

Topics

  • Lipid Membrane Structure and Behavior10.3%
  • Protein Structure and Dynamics7.6%
  • Receptor Mechanisms and Signaling3.6%
  • Computational Drug Discovery Methods3.1%
  • Spectroscopy and Quantum Chemical Studies2.8%
  • Ion channel regulation and function2.2%
  • Other70.4%

Coauthors

All papers

Open in search
  1. CHARMM-GUI Input Generator for NAMD, GROMACS, AMBER, OpenMM, and CHARMM/OpenMM Simulations Using the CHARMM36 Additive Force Field

    Authors: Jumin Lee, Xi Cheng, Jason Swails, Min Sun Yeom, Peter Eastman, Justin A. Lemkul, Shuai Wei, Joshua Buckner, Jong Cheol Jeong, Yifei Qi, Sunhwan Jo, Vijay S. Pande, David A. Case, Charles L. Brooks, Alexander D. MacKerell, Jeffery B. Klauda, Wonpil Im - Journal of Chemical Theory and Computation 2015 cited by 4,325

  2. CHARMM-GUI Membrane Builder toward realistic biological membrane simulations

    Authors: Emilia L. Wu, Xi Cheng, Sunhwan Jo, Huan Rui, Kevin C. Song, Eder M. Dávila-Contreras, Yifei Qi, Jumin Lee, Viviana Monje-Galvan, Richard M. Venable, Jeffery B. Klauda, Wonpil Im - Journal of Computational Chemistry, J. Comput. Chem. 2014 cited by 2,795

  3. Update of the CHARMM All-Atom Additive Force Field for Lipids: Validation on Six Lipid Types

    Authors: Jeffery B. Klauda, Richard M. Venable, J. Alfredo Freites, Joseph W. O’Connor, Douglas J. Tobias, Carlos Mondragon-Ramirez, Igor Vorobyov, Alexander D. MacKerell, Richard W. Pastor - The Journal of Physical Chemistry B 2010 cited by 4,712

  4. CHARMM-GUI Membrane Builder for Mixed Bilayers and Its Application to Yeast Membranes

    Authors: Sunhwan Jo, Joseph B. Lim, Jeffery B. Klauda, Wonpil Im - Biophysical Journal 2009 cited by 1,792

  5. CHARMM-GUI Membrane Builder for Complex Biological Membrane Simulations with Glycolipids and Lipoglycans

    Authors: Jumin Lee, Dhilon S. Patel, Jonas Ståhle, Sang‐Jun Park, Nathan R. Kern, Seonghoon Kim, Joon-Seong Lee, Xi Cheng, Miguel A. Valvano, Otto Holst, Yuriy A. Knirel, Yifei Qi, Sunhwan Jo, Jeffery B. Klauda, Göran Widmalm, Wonpil Im - Journal of Chemical Theory and Computation 2018 cited by 675

  6. CHARMM-GUI Input Generator for NAMD, Gromacs, Amber, Openmm, and CHARMM/OpenMM Simulations using the CHARMM36 Additive Force Field

    Authors: Jumin Lee, Xi Cheng, Sunhwan Jo, Alexander D. MacKerell, Jeffery B. Klauda, Wonpil Im - Biophysical Journal 2016 cited by 485

  7. CHARMM-GUI Supports Hydrogen Mass Repartitioning and Different Protonation States of Phosphates in Lipopolysaccharides

    Authors: Ya Gao, Jumin Lee, Iain Peter Shand Smith, Hwayoung Lee, Seonghoon Kim, Yifei Qi, Jeffery B. Klauda, Göran Widmalm, Syma Khalid, Wonpil Im - Journal of Chemical Information and Modeling, J. Chem. Inf. Model. 2021 cited by 138

  8. Developing and Testing of Lipid Force Fields with Applications to Modeling Cellular Membranes

    Authors: Alison N. Leonard, Eric Wang, Viviana Monje‐Galvan, Jeffery B. Klauda - Chemical Reviews 2019 cited by 116

  9. CHARMM at 45: Enhancements in Accessibility, Functionality, and Speed

    Authors: Wonmuk Hwang, Steven L. Austin, Arnaud Blondel, Eric D. Boittier, Stefan Boresch, Matthias Buck, Joshua Buckner, Amedeo Caflisch, Hao-Ting Chang, Xi Cheng, Yeol Kyo Choi, Jhih‐Wei Chu, Michael F. Crowley, Qiang Cui, A. Damjanović, Yuqing Deng, M. Devereux, Xinqiang Ding, Michael Feig, Jiali Gao, David R. Glowacki, James E. Gonzales, Mehdi Bagheri Hamaneh, Edward Harder, Ryan L. Hayes, Jing Huang, Yandong Huang, Phillip S. Hudson, Wonpil Im, Shahidul M. Islam, Wei Jiang, Michael R. Jones, Silvan Käser, Fiona L. Kearns, Nathan R. Kern, Jeffery B. Klauda, Themis Lazaridis, Jinhyuk Lee, Justin A. Lemkul, Xiaorong Liu, Yun Luo, Alexander D. MacKerell, Dan Thomas Major, Markus Meuwly, Kwangho Nam, Lennart Nilsson, Victor Ovchinnikov, Emanuele Paci, Soohyung Park, Richard W. Pastor, Amanda R. Pittman, Carol Beth Post, Samarjeet Prasad, Jingzhi Pu, Yifei Qi, Thenmalarchelvi Rathinavelan, Daniel R. Roe, Benoı̂t Roux, Christopher N. Rowley, Jana Shen, Andrew C. Simmonett, Alexander J. Sodt, Kai Töpfer, Meenu Upadhyay, Arjan van der Vaart, Luis Itza Vazquez-Salazar, Richard M. Venable, Luke Warrensford, H. Lee Woodcock, Yujin Wu, Charles L. Brooks, Bernard R. Brooks, Martin Karplus - The Journal of Physical Chemistry B 2024 cited by 114

  10. GraphVAMPNet, using graph neural networks and variational approach to markov processes for dynamical modeling of biomolecules

    Authors: Mahdi Ghorbani, Samarjeet Prasad, Jeffery B. Klauda, Bernard R. Brooks - The Journal of Chemical Physics 2022 cited by 48

  11. CHARMM36 Lipid Force Field with Explicit Treatment of Long-Range Dispersion: Parametrization and Validation for Phosphatidylethanolamine, Phosphatidylglycerol, and Ether Lipids

    Authors: Yalun Yu, Andreas Krämer, Richard M. Venable, Bernard R. Brooks, Jeffery B. Klauda, Richard W. Pastor - Journal of Chemical Theory and Computation 2021 cited by 116

  12. Engineering Escherichia coli membrane phospholipid head distribution improves tolerance and production of biorenewables

    Authors: Zaigao Tan, Pouyan Khakbaz, Yingxi Chen, Jeremy Lombardo, Jong Moon Yoon, Jacqueline V. Shanks, Jeffery B. Klauda, Laura R. Jarboe - Metabolic Engineering 2017 cited by 113

  13. Drude Polarizable Lipid Force Field with Explicit Treatment of Long-Range Dispersion: Parametrization and Validation for Saturated and Monounsaturated Zwitterionic Lipids

    Authors: Yalun Yu, Richard M. Venable, Jonathan Thirman, Payal Chatterjee, Anmol Kumar, Richard W. Pastor, Benoı̂t Roux, Alexander D. MacKerell, Jeffery B. Klauda - Journal of Chemical Theory and Computation 2023 cited by 36

  14. Semi-automated Optimization of the CHARMM36 Lipid Force Field to Include Explicit Treatment of Long-Range Dispersion

    Authors: Yalun Yu, Andreas Krämer, Richard M. Venable, Andrew C. Simmonett, Alexander D. MacKerell, Jeffery B. Klauda, Richard W. Pastor, Bernard R. Brooks - Journal of Chemical Theory and Computation 2021 cited by 78

  15. CHARMM-GUI HMMM Builder for Membrane Simulations with the Highly Mobile Membrane-Mimetic Model

    Authors: Yifei Qi, Xi Cheng, Jumin Lee, Josh V. Vermaas, Taras V. Pogorelov, Emad Tajkhorshid, Soohyung Park, Jeffery B. Klauda, Wonpil Im - Biophysical Journal 2015 cited by 128

  16. CHARMM36 United Atom Chain Model for Lipids and Surfactants

    Authors: Sarah Lee, Alan Tran, Matthew Allsopp, Joseph B. Lim, Jérôme Hénin, Jeffery B. Klauda - The Journal of Physical Chemistry B 2013 cited by 195

  17. Antimicrobial Peptide Mechanism Studied by Scattering-Guided Molecular Dynamics Simulation

    Authors: Robert Allsopp, Ànna Pavlova, Tyler Cline, Aria Salyapongse, Richard E. Gillilan, Y. Peter Di, Berthony Deslouches, Jeffery B. Klauda, James C. Gumbart, Stephanie Tristram‐Nagle - The Journal of Physical Chemistry B 2022 cited by 31

  18. CHARMM All-Atom Additive Force Field for Sphingomyelin: Elucidation of Hydrogen Bonding and of Positive Curvature

    Authors: Richard M. Venable, Alexander J. Sodt, Brent Rogaski, Huan Rui, Elizabeth Hatcher, Alexander D. MacKerell, Richard W. Pastor, Jeffery B. Klauda - Biophysical Journal 2014 cited by 227

  19. Bilayer Properties of Lipid A from Various Gram-Negative Bacteria

    Authors: Seonghoon Kim, Dhilon S. Patel, Soohyung Park, Joanna S.G. Slusky, Jeffery B. Klauda, Göran Widmalm, Wonpil Im - Biophysical Journal 2016 cited by 117

  20. CHARMM-GUI Nanodisc Builder for modeling and simulation of various nanodisc systems

    Authors: Yifei Qi, Jumin Lee, Jeffery B. Klauda, Wonpil Im - Journal of Computational Chemistry, J. Comput. Chem. 2019 cited by 73

  21. CHARMM-GUI Micelle Builder for Pure/Mixed Micelle and Protein/Micelle Complex Systems

    Authors: Xi Cheng, Sunhwan Jo, Hui Sun Lee, Jeffery B. Klauda, Wonpil Im - Journal of Chemical Information and Modeling, J. Chem. Inf. Model. 2013 cited by 112

  22. Update of the Cholesterol Force Field Parameters in CHARMM

    Authors: Joseph B. Lim, Brent Rogaski, Jeffery B. Klauda - The Journal of Physical Chemistry B 2011 cited by 218

  23. Improving the CHARMM Force Field for Polyunsaturated Fatty Acid Chains

    Authors: Jeffery B. Klauda, Viviana Monje‐Galvan, Taehoon Kim, Wonpil Im - The Journal of Physical Chemistry B 2012 cited by 184

  24. E. coli Outer Membrane and Interactions with OmpLA

    Authors: Emilia L. Wu, Patrick J. Fleming, Min Sun Yeom, Göran Widmalm, Jeffery B. Klauda, Karen G. Fleming, Wonpil Im - Biophysical Journal 2014 cited by 154