Joachim Kopka
Active 1998–2025
- 112
- Papers
- 31,238
- Citations
- 78
- h-index
- 107
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology53.4%
- Agricultural and Biological Sciences24.5%
- Medicine9.2%
- Environmental Science2.2%
- Engineering2.2%
- Chemistry2%
- Other6.5%
Topics
- Metabolomics and Mass Spectrometry Studies11.7%
- Photosynthetic Processes and Mechanisms4.7%
- Plant Stress Responses and Tolerance4.4%
- Plant Gene Expression Analysis3.5%
- Plant Molecular Biology Research2.9%
- Microbial Metabolic Engineering and Bioproduction2.5%
- Other70.3%
Coauthors
- Alexander Erban48
- Alisdair R. Fernie14
- Lothar Willmitzer12
- Federico Martínez-Seidel11
- Ute Roessner10
- Joachim Selbig8
- Alexander Luedemann7
- Dirk K. Hincha7
- Ines Fehrle7
- Martin Hagemann7
- Royston Goodacre7
- Alexandre Augusto Pereira Firmino6
- Ellen Zuther6
- Nicolas Schauer6
- Oliver Fiehn6
- Aleksandra Skirycz5
- Bernd Mueller‐Roeber5
- Dirk Steinhauser5
- Dirk Walther5
- Mark Stitt5
- Michael K. Udvardi5
- Olga Beine-Golovchuk5
- Rainer Hoefgen5
- Ralph Bock5
All papers
- Proposed minimum reporting standards for chemical analysis
Authors: Lloyd W. Sumner, Alexander Amberg, Dave Barrett, Michael H. Beale, Richard D. Beger, Clare A. Daykin, Teresa W.‐M. Fan, Oliver Fiehn, Royston Goodacre, Julian L. Griffin, Thomas Hankemeier, Nigel Hardy, James M. Harnly, Richard M. Higashi, Joachim Kopka, Andrew N. Lane, John C. Lindon, Philip J. Marriott, Andrew W. Nicholls, Michael D. Reily, John J. Thaden, Mark R. Viant - Metabolomics 2007 cited by 5,024
- Gas chromatography mass spectrometry–based metabolite profiling in plants
Authors: Jan Lisec, Nicolas Schauer, Joachim Kopka, Lothar Willmitzer, Alisdair R. Fernie - Nature Protocols 2006 cited by 2,193
- Metabolite profiling for plant functional genomics
Authors: Oliver Fiehn, Joachim Kopka, Peter Dörmann, Thomas Altmann, Richard N. Trethewey, Lothar Willmitzer - Nature Biotechnology 2000 cited by 2,131
- GMD@CSB.DB: the Golm Metabolome Database
Authors: Joachim Kopka, Nicolas Schauer, Stephan Krueger, Claudia Birkemeyer, Björn Usadel, Eveline Bergmüller, Peter Dörmann, Wolfram Weckwerth, Yves Gibon, Mark Stitt, Lothar Willmitzer, Alisdair R. Fernie, Dirk Steinhauser - Computer applications in the biosciences, Bioinform. 2004 cited by 1,401
- Exploring the Temperature-Stress Metabolome of Arabidopsis
Authors: Fatma Kaplan, Joachim Kopka, Dale Haskell, Wei Zhao, Kyle Schiller, Nicole Gatzke, Dong Yul Sung, Charles L. Guy - PLANT PHYSIOLOGY 2004 cited by 1,095
- Carbon flux through photosynthesis and central carbon metabolism show distinct patterns between algae, C3 and C4 plants
Authors: Haim Treves, Anika Küken, Stéphanie Arrivault, Hirofumi Ishihara, Ines Hoppe, Alexander Erban, Melanie Höhne, Thiago Alexandre Moraes, Joachim Kopka, Jędrzej Szymański, Zoran Nikoloski, Mark Stitt - Nature Plants 2021 cited by 120
- Mass appeal: metabolite identification in mass spectrometry-focused untargeted metabolomics
Authors: Warwick B. Dunn, Alexander Erban, Ralf J. M. Weber, Darren J. Creek, Marie Brown, Rainer Breitling, Thomas Hankemeier, Royston Goodacre, Steffen Neumann, Joachim Kopka, Mark R. Viant - Metabolomics 2012 cited by 550
- Priming and memory of stress responses in organisms lacking a nervous system
Authors: Monika Hilker, Jens Schwachtje, Margarete Baier, Salma Balazadeh, Isabel Bäurle, Sven Geiselhardt, Dirk K. Hincha, Reinhard Kunze, Bernd Mueller‐Roeber, Matthias C. Rillig, Jens Rolff, Tina Romeis, Thomas Schmülling, Anke Steppuhn, Joost T. van Dongen, Sarah J. Whitcomb, Susanne Wurst, Ellen Zuther, Joachim Kopka - Biological reviews/Biological reviews of the Cambridge Philosophical Society 2015 cited by 579
- A new synthetic biology approach allows transfer of an entire metabolic pathway from a medicinal plant to a biomass crop
Authors: Paulina Fuentes, Fei Zhou, Alexander Erban, Daniel Karcher, Joachim Kopka, Ralph Bock - eLife 2016 cited by 204
- Nutrimetabolomics: An Integrative Action for Metabolomic Analyses in Human Nutritional Studies
Authors: Marynka Ulaszewska, Christoph H. Weinert, Alessia Trimigno, Reto Portmann, Cristina Andrés‐Lacueva, René Badertscher, Lorraine Brennan, Carl Brunius, Achim Bub, Francesco Capozzi, Marta Cialiè Rosso, Chiara Cordero, Hannelore Daniel, Stéphanie Durand, Bjoern Egert, Paola G. Ferrario, Edith J. M. Feskens, Pietro Franceschi, Mar Garcia‐Aloy, Franck Giacomoni, Pieter Giesbertz, Raúl González‐Domínguez, Kati Hanhineva, Lieselot Hemeryck, Joachim Kopka, Sabine E. Kulling, Rafaël Llorach, Claudine Manach, Fulvio Mattivi, Carole Migné, Linda H. Münger, Beate Ott, Gianfranco Picone, Grégory Pimentel, Estelle Pujos‐Guillot, Samantha Riccadonna, Manuela J. Rist, Caroline Rombouts, Josep Rubert, Thomas Skurk, P.S.C. Sri Harsha, Lieven Van Meulebroek, Lynn Vanhaecke, Rosa Vázquez‐Fresno, David S. Wishart, Guy Vergères - Molecular Nutrition & Food Research 2018 cited by 238
- Recommendations for Reporting Metabolite Data
Authors: Alisdair R. Fernie, Asaph Aharoni, Lothar Willmitzer, Mark Stitt, Takayuki Tohge, Joachim Kopka, Adam Carroll, Kazuki Saito, Paul D. Fraser, Vincenzo De Luca - The Plant Cell 2011 cited by 337
- Comprehensive Dissection of Spatiotemporal Metabolic Shifts in Primary, Secondary, and Lipid Metabolism during Developmental Senescence in Arabidopsis
Authors: Mutsumi Watanabe, Salma Balazadeh, Takayuki Tohge, Alexander Erban, Patrick Giavalisco, Joachim Kopka, Bernd Mueller‐Roeber, Alisdair R. Fernie, Rainer Hoefgen - PLANT PHYSIOLOGY 2013 cited by 314
- DOF transcription factor AtDof1.1 (OBP2) is part of a regulatory network controlling glucosinolate biosynthesis in Arabidopsis
Authors: Aleksandra Skirycz, Michael Reichelt, Meike Burow, Claudia Birkemeyer, Jakub Rolc̆ı́k, Joachim Kopka, María Inés Zanor, Jonathan Gershenzon, Miroslav Strnad, Jan Szopa, Bernd Mueller‐Roeber, Isabell Witt - The Plant Journal 2006 cited by 261
- Simultaneous analysis of metabolites in potato tuber by gas chromatography–mass spectrometry
Authors: Ute Roessner, Cornelia Wagner, Joachim Kopka, Richard N. Trethewey, Lothar Willmitzer - The Plant Journal 2000 cited by 1,159
- Potential of metabolomics as a functional genomics tool
Authors: R.J. Bino, Robert D. Hall, Oliver Fiehn, Joachim Kopka, Kazuki Saito, John Draper, Basil J. Nikolau, Pedro Mendes, Ute Roessner, Michael H. Beale, Richard N. Trethewey, B. Markus Lange, Eve Syrkin Wurtele, Lloyd W. Sumner - Trends in Plant Science 2004 cited by 785
- Metabolic and transcriptomic signatures of rice floral organs reveal sugar starvation as a factor in reproductive failure under heat and drought stress
Authors: Xia Li, Lovely Mae F. Lawas, Richard Malo, Ulrike Glaubitz, Alexander Erban, Ramil Mauleon, Sigrid Heuer, Ellen Zuther, Joachim Kopka, Dirk K. Hincha, S. V. Krishna Jagadish - Plant Cell & Environment 2015 cited by 221
- The serine–glycine–one-carbon metabolic network orchestrates changes in nitrogen and sulfur metabolism and shapes plant development
Authors: Sara Rosa‐Téllez, Andrea Alcántara‐Enguídanos, Federico Martínez-Seidel, Ruben Casatejada‐Anchel, Sompop Saeheng, Clayton Bailes, Alexander Erban, David B. Medeiros, Paula Alepúz, José Tomás Matus, Joachim Kopka, Jesús Muñoz‐Bertomeu, Stephan Krueger, Sanja Roje, Alisdair R. Fernie, Roc Ros - The Plant Cell 2023 cited by 50
- Systems Rebalancing of Metabolism in Response to Sulfur Deprivation, as Revealed by Metabolome Analysis of Arabidopsis Plants
Authors: Victoria J. Nikiforova, Joachim Kopka, Vladimir Tolstikov, Oliver Fiehn, Laura Hopkins, Malcolm J. Hawkesford, H. Hesse, Rainer Hoefgen - PLANT PHYSIOLOGY 2005 cited by 430
- Transcriptome and metabolome reprogramming in Vitis vinifera cv. Trincadeira berries upon infection with Botrytis cinerea
Authors: Patricia Agudelo‐Romero, Alexander Erban, Cecília Rego, Pablo Carbonell‐Bejerano, Teresa Nascimento, Lisete Sousa, José M. Martı́nez-Zapater, Joachim Kopka, Ana Margarida Fortes - Journal of Experimental Botany 2015 cited by 185
- Comprehensive metabolic profiling and phenotyping of interspecific introgression lines for tomato improvement
Authors: Nicolas Schauer, Yaniv Semel, Ute Roessner, Amit Gur, Ilse Balbo, Fernando Carrari, Tzili Pleban, Alicia Perez‐Melis, Claudia Bruedigam, Joachim Kopka, Lothar Willmitzer, Dani Zamir, Alisdair R. Fernie - Nature Biotechnology 2006 cited by 766
- Transcript and metabolite profiling during cold acclimation of Arabidopsis reveals an intricate relationship of cold‐regulated gene expression with modifications in metabolite content
Authors: Fatma Kaplan, Joachim Kopka, Dong Yul Sung, Wei Zhao, Mick Popp, Ron Porat, Charles L. Guy - The Plant Journal 2007 cited by 550
- Identification of primary and secondary metabolites with phosphorus status‐dependent abundance in Arabidopsis, and of the transcription factor PHR1 as a major regulator of metabolic changes during phosphorus limitation
Authors: Bikram Datt Pant, Pooja Pant, Alexander Erban, David V. Huhman, Joachim Kopka, Wolf‐Rüdiger Scheible - Plant Cell & Environment 2014 cited by 242
- COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access
Authors: Reza M. Salek, Steffen Neumann, Daniel Schober, Jan Hummel, Kenny Billiau, Joachim Kopka, Elon Correa, Theo Reijmers, Antonio Rosato, Leonardo Tenori, Paola Turano, Silvia Marín, Catherine Deborde, Daniel Jacob, Dominique Rolin, Benjamin Dartigues, Pablo Conesa, Kenneth Haug, Philippe Rocca‐Serra, Steve O’Hagan, Jie Hao, Michael Van Vliet, Marko Sysi‐Aho, Christian Ludwig, Jildau Bouwman, Marta Cascante, Timothy M. D. Ebbels, Julian L. Griffin, Annick Moing, Macha Nikolski, Matej Orešič, Susanna‐Assunta Sansone, Mark R. Viant, Royston Goodacre, Ulrich L. Günther, Thomas Hankemeier, Claudio Luchinat, Dirk Walther, Christoph Steinbeck - Metabolomics 2015 cited by 189
- GC–MS libraries for the rapid identification of metabolites in complex biological samples
Authors: Nicolas Schauer, Dirk Steinhauser, Sergej Strelkov, Dietmar Schomburg, Gordon Allison, Thomas Möritz, Krister Lundgren, Ute Roessner, Megan G. Forbes, Lothar Willmitzer, Alisdair R. Fernie, Joachim Kopka - FEBS Letters 2005 cited by 707
