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Shujun Luo

Active 2000–2024

46
Papers
21,222
Citations
43
h-index
45
i10-index

Citations

Citations per year for Shujun Luo1970: 1 citations1978: 2 citations1980: 1 citations1983: 1 citations1987: 1 citations1997: 1 citations2000: 4 citations2001: 22 citations2002: 30 citations2003: 31 citations2004: 56 citations2005: 55 citations2006: 90 citations2007: 76 citations2008: 110 citations2009: 227 citations2010: 350 citations2011: 456 citations2012: 567 citations2013: 494 citations2014: 444 citations2015: 418 citations2016: 360 citations2017: 326 citations2018: 285 citations2019: 689 citations2020: 585 citations2021: 564 citations2022: 417 citations2023: 273 citations2024: 384 citations2025: 161 citations2026: 10 citations1971–1977: no citations, so these years are not shown1979: no citations, so this year is not shown1981–1982: no citations, so these years are not shown1984–1986: no citations, so these years are not shown1988–1996: no citations, so these years are not shown1998–1999: no citations, so these years are not shown

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 3,595 citing papers, 32.7% of this breakdownChina: 1,312 citing papers, 11.9% of this breakdownUnited Kingdom: 774 citing papers, 7% of this breakdownGermany: 599 citing papers, 5.4% of this breakdownAustralia: 403 citing papers, 3.7% of this breakdownCanada: 374 citing papers, 3.4% of this breakdownFrance: 330 citing papers, 3% of this breakdownSpain: 280 citing papers, 2.5% of this breakdownItaly: 262 citing papers, 2.4% of this breakdownJapan: 249 citing papers, 2.3% of this breakdownSweden: 210 citing papers, 1.9% of this breakdownIndia: 192 citing papers, 1.7% of this breakdown
0%32.7%Other 22.1%

Institutions

Fields

  • Biochemistry, Genetics and Molecular Biology72.3%
  • Agricultural and Biological Sciences10.3%
  • Medicine8.6%
  • Neuroscience2.2%
  • Immunology and Microbiology1.7%
  • Engineering1.6%
  • Other3.3%

Topics

  • RNA Research and Splicing9.6%
  • RNA modifications and cancer8.2%
  • RNA and protein synthesis mechanisms5.7%
  • Cancer-related molecular mechanisms research4%
  • MicroRNA in disease regulation3.8%
  • Genomics and Phylogenetic Studies3.8%
  • Other64.9%

Coauthors

All papers

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  1. Alternative isoform regulation in human tissue transcriptomes

    Authors: Eric T. Wang, Rickard Sandberg, Shujun Luo, Irina Khrebtukova, Lu Zhang, Christine Mayr, Stephen F. Kingsmore, Gary P. Schroth, Christopher B. Burge - Nature 2008 cited by 5,406

  2. Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells

    Authors: Daniel Ramsköld, Shujun Luo, Yu-Chieh Wang, Robin Li, Qiaolin Deng, Omid R. Faridani, Gregory A. Daniels, Irina Khrebtukova, Jeanne F. Loring, Louise C. Laurent, Gary P. Schroth, Rickard Sandberg - Nature Biotechnology 2012 cited by 1,664

  3. Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen

    Authors: Matthias Hess, Alexander Sczyrba, Rob Egan, Tae‐Wan Kim, Harshal A. Chokhawala, Gary P. Schroth, Shujun Luo, Douglas S. Clark, Feng Chen, Tao Zhang, Roderick I. Mackie, L Pennacchio, Susannah G. Tringe, Axel Visel, Tanja Woyke, Zhong Wang, Edward M. Rubin - Science 2011 cited by 1,364

  4. Mammalian microRNAs: experimental evaluation of novel and previously annotated genes

    Authors: Hou‐Yu Chiang, Lori W. Schoenfeld, J. Graham Ruby, Vincent C. Auyeung, Noah Spies, Daehyun Baek, Wendy K. Johnston, Carsten Russ, Shujun Luo, Joshua Babiarz, Robert Blelloch, Gary P. Schroth, Chad Nusbaum, David P. Bartel - Genes & Development 2010 cited by 840

  5. PRG-1 and 21U-RNAs Interact to Form the piRNA Complex Required for Fertility in C. elegans

    Authors: Pedro J. Batista, J. Graham Ruby, Julie M. Claycomb, Rosaria Chiang, Noah Fahlgren, Kristin D. Kasschau, Daniel A. Chaves, Weifeng Gu, Jessica J. Vasale, Shenghua Duan, Darryl Conte, Shujun Luo, Gary P. Schroth, James C. Carrington, David P. Bartel, Craig C. Mello - Molecular Cell 2008 cited by 640

  6. Transcriptome-wide Regulation of Pre-mRNA Splicing and mRNA Localization by Muscleblind Proteins

    Authors: Eric T. Wang, Neal Cody, Sonali P. Jog, Michela Biancolella, Thomas T. Wang, Daniel J. Treacy, Shujun Luo, Gary P. Schroth, David E. Housman, Sita Reddy, Éric Lécuyer, Christopher B. Burge - Cell 2012 cited by 519

  7. Evaluation of quantitative miRNA expression platforms in the microRNA quality control (miRQC) study

    Authors: Pieter Mestdagh, Nicole Hartmann, Lukas Baeriswyl, Ditte Andreasen, Nathalie Bernard, Caifu Chen, David L. Cheo, Petula D'Andrade, Mike DeMayo, Lucas Dennis, Stefaan Derveaux, Yun Feng, Stephanie Fulmer-Smentek, Bernhard Gerstmayer, Julia S. Gouffon, Chris Grimley, Eric Lader, Kathy Lee, Shujun Luo, Peter Mouritzen, Aishwarya Narayanan, Sunali Patel, Sabine Peiffer, Silvia Rüberg, Gary P. Schroth, Dave Schuster, Jonathan M. Shaffer, Elliot J Shelton, Scott Silveria, Umberto Ulmanella, Vamsi Veeramachaneni, Frank Staedtler, Thomas Peters, Toumy Guettouche, Linda Wong, Jo Vandesompele - Nature Methods 2014 cited by 637

  8. Genomic Complexity Predicts Resistance to Endocrine Therapy and CDK4/6 Inhibition in Hormone Receptor–Positive (HR+)/HER2-Negative Metastatic Breast Cancer

    Authors: Andrew A. Davis, Jingqin Luo, Tiantian Zheng, Chao Dai, Xiaoxi Dong, Lu Tan, Rama Suresh, Foluso O. Ademuyiwa, Caron Rigden, Timothy P. Rearden, Katherine Clifton, Katherine N. Weilbaecher, Ashley Frith, Pavan K. Tandra, Tracy Summa, Brittney Haas, Shana Thomas, Leonel F. Hernandez‐Aya, Lindsay L. Peterson, Xiaohong Wang, Shujun Luo, Kemin Zhou, Pan Du, Shidong Jia, Bonnie L. King, Jairam Krishnamurthy, X. Cynthia - Clinical Cancer Research 2023 cited by 48

  9. Global identification of microRNA–target RNA pairs by parallel analysis of RNA ends

    Authors: Marcelo A. German, Manoj Pillay, Dong‐Hoon Jeong, Amit Hetawal, Shujun Luo, Prakash E. Janardhanan, Vimal Kannan, Linda A. Rymarquis, Kan Nobuta, Rana German, Emanuele De Paoli, Cheng Lu, Gary P. Schroth, Blake C. Meyers, Pamela J. Green - Nature Biotechnology 2008 cited by 856

  10. Multiplexed RNA structure characterization with selective 2′-hydroxyl acylation analyzed by primer extension sequencing (SHAPE-Seq)

    Authors: Julius B. Lucks, Stefanie Mortimer, Cole Trapnell, Shujun Luo, Sharon Aviran, Gary P. Schroth, Lior Pachter, Jennifer A. Doudna, Adam P. Arkin - National Academy of Sciences, Proceedings of the National Academy of Sciences 2011 cited by 405

  11. Meraculous: De Novo Genome Assembly with Short Paired-End Reads

    Authors: Jarrod Chapman, Isaac Ho, Sirisha Sunkara, Shujun Luo, Gary P. Schroth, Daniel S. Rokhsar - PLoS ONE 2011 cited by 243

  12. Gene expression analysis by massively parallel signature sequencing (MPSS) on microbead arrays

    Authors: Sydney Brenner, Maria Johnson, John A. Bridgham, George S. Golda, D. H. Lloyd, Davida Johnson, Shujun Luo, Sarah N. McCurdy, Michael F. Foy, Mark Ewan, Rithy K. Roth, Dave George, Sam Eletr, Glenn Albrecht, Eric H. Vermaas, Steven R. Williams, Keith Moon, Timothy Burcham, M. PALLAS, Robert B. DuBridge, James W. Kirchner, Karen L. Fearon, Jen-i Mao, Kevin Corcoran - Nature Biotechnology 2000 cited by 1,359

  13. Direct measurement of DNA affinity landscapes on a high-throughput sequencing instrument

    Authors: Razvan Nutiu, Robin C. Friedman, Shujun Luo, Irina Khrebtukova, David R. Silva, Robin Li, Lu Zhang, Gary P. Schroth, Christopher B. Burge - Nature Biotechnology 2011 cited by 209

  14. Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS)

    Authors: Gregory E. Crawford, Ingeborg Holt, James R. Whittle, Bryn D. Webb, Denise S. Tai, Sean Davis, Elliott H. Margulies, YiDong Chen, John Bernat, David Ginsburg, Daixing Zhou, Shujun Luo, Thomas J. Vasicek, Mark J. Daly, Tyra G. Wolfsberg, Francis S. Collins - Genome Research 2005 cited by 515

  15. Genome Sequencing and Analysis of the Tasmanian Devil and Its Transmissible Cancer

    Authors: Elizabeth P. Murchison, Ole Schulz-Trieglaff, Zemin Ning, Ludmil B. Alexandrov, Markus Bauer, Beiyuan Fu, Matthew M. Hims, Zhihao Ding, Sergii Ivakhno, Caitlin M. Stewart, Bee Ling Ng, Wendy S.W. Wong, Bronwen Aken, Simon White, Amber E. Alsop, Jennifer Becq, Graham R. Bignell, R. Keira Cheetham, William Cheng, Thomas R. Connor, Anthony J. Cox, Zhiping Feng, Yong Gu, Russell Grocock, Simon R. Harris, Irina Khrebtukova, Zoya Kingsbury, Mark Kowarsky, Alexandre Kreiss, Shujun Luo, John Marshall, David J. McBride, Lisa Murray, Anne‐Maree Pearse, Keiran Raine, Isabelle Rasolonjatovo, Richard J. Shaw, Philip Tedder, Carolyn Tregidgo, Albert J. Vilella, David C. Wedge, GM Woods, Niall Gormley, Sean Humphray, Gary P. Schroth, Geoff Smith, Kevin P. Hall, Stephen M. J. Searle, Nigel P. Carter, Anthony T. Papenfuss, P. Andrew Futreal, Peter J. Campbell, Fengtang Yang, David Bentley, Dirk J. Evers, Michael R. Stratton - Cell 2012 cited by 348

  16. Monitoring chronic lymphocytic leukemia progression by whole genome sequencing reveals heterogeneous clonal evolution patterns

    Authors: Anna Schuh, Jennifer Becq, Sean Humphray, Adrian Alexa, Adam Burns, Ruth Clifford, Stephan M. Feller, Russell Grocock, Shirley Henderson, Irina Khrebtukova, Zoya Kingsbury, Shujun Luo, David J. McBride, Lisa Murray, Toshi Menju, Adele Timbs, Mark T. Ross, Jenny C. Taylor, David Bentley - Blood 2012 cited by 332

  17. Global analysis of estrogen receptor beta binding to breast cancer cell genome reveals an extensive interplay with estrogen receptor alpha for target gene regulation

    Authors: Olì MV Grober, Margherita Mutarelli, Giorgio Giurato, Maria Ravo, Luigi Cicatiello, Maria Rosaria De Filippo, Lorenzo Ferraro, Giovanni Nassa, Maria Francesca Papa, Ornella Paris, Roberta Tarallo, Shujun Luo, Gary P. Schroth, Vladimı́r Beneš, Alessandro Weisz - BMC Genomics 2011 cited by 171

  18. High prevalence of focal and multi-focal somatic genetic variants in the human brain

    Authors: Michael J. Keogh, Wei Wei, Juvid Aryaman, Lauren Walker, Jelle van den Ameele, Jon Coxhead, Ian Wilson, Matthew Bashton, Jon Beck, John West, Richard Chen, Christian Haudenschild, Gábor Bartha, Shujun Luo, Christopher M. Morris, Nick S. Jones, Johannes Attems, Patrick F. Chinnery - Nature Communications 2018 cited by 77

  19. RNA-ligase-dependent biases in miRNA representation in deep-sequenced small RNA cDNA libraries

    Authors: Markus Hafner, Neil Renwick, Miguel Brown, Aleksandra Mihailović, Daniel Holoch, Carolina Lin, John Pena, Jeffrey D. Nusbaum, Pavel Morozov, János Ludwig, Tolulope Ojo, Shujun Luo, Gary P. Schroth, Thomas Tuschl - RNA 2011 cited by 346

  20. Cloche is a bHLH-PAS transcription factor that drives haemato-vascular specification

    Authors: Sven Reischauer, Oliver A. Stone, Alethia Villasenor, Neil Chi, Suk‐Won Jin, Marcel Martin, Miler T. Lee, Nana Fukuda, Michele Marass, Alec Witty, Ian T. Fiddes, Taiyi Kuo, Won‐Suk Chung, Sherveen Salek, Robert Lerrigo, Jessica Alsiö, Shujun Luo, Dominika Tworus, Sruthy Maria Augustine, Sophie Mucenieks, Björn Nystedt, Antonio J. Giráldez, Gary P. Schroth, Olov Andersson, Didier Y. R. Stainier - Nature 2016 cited by 176

  21. High-Resolution Analysis of Parent-of-Origin Allelic Expression in the Mouse Brain

    Authors: Christopher Gregg, Jiangwen Zhang, Brandon Weissbourd, Shujun Luo, Gary P. Schroth, David Haig, Catherine Dulac - Science 2010 cited by 602

  22. Genome, epigenome and RNA sequences of monozygotic twins discordant for multiple sclerosis

    Authors: Sergio E. Baranzini, Joann Mudge, Jennifer C. van Velkinburgh, Pouya Khankhanian, Irina Khrebtukova, Neil Miller, Lu Zhang, Andrew Farmer, Callum J. Bell, Ryan W. Kim, Gregory D. May, Jimmy E. Woodward, Stacy J. Caillier, Joseph P. McElroy, Refujia Gomez, Marcelo J. Pando, Leonda E. Clendenen, Elena E. Ganusova, Faye Schilkey, Thiruvarangan Ramaraj, Omar Khan, Jim J. Huntley, Shujun Luo, Pui–Yan Kwok, Thomas D. Wu, Gary P. Schroth, Jorge R. Oksenberg, Stephen L. Hauser, Stephen F. Kingsmore - Nature 2010 cited by 476

  23. A mutation in TGFB3 associated with a syndrome of low muscle mass, growth retardation, distal arthrogryposis and clinical features overlapping with marfan and loeys–dietz syndrome

    Authors: Hugh Young Rienhoff, Chang‐Yeol Yeo, Rachel Morissette, Irina Khrebtukova, Jonathan S. Melnick, Shujun Luo, Nan Leng, Y.O. Kim, Gary P. Schroth, John Westwick, Hannes Vogel, Nazli B. McDonnell, Judith G. Hall, Malcolm Whitman - American Journal of Medical Genetics Part A 2013 cited by 107

  24. Ultrasonic disruption extraction, characterization and bioactivities of polysaccharides from wild Armillaria mellea

    Authors: Ruizhan Chen, Xing Ren, Wei Yin, Juan Lu, Li Tian, Lun Zhao, Ruizhi Yang, Shujun Luo - International Journal of Biological Macromolecules 2019 cited by 34