Taane G. Clark
Active 2000–2026
- 207
- Papers
- 23,071
- Citations
- 85
- h-index
- 185
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Medicine64.7%
- Biochemistry, Genetics and Molecular Biology18.6%
- Immunology and Microbiology3.9%
- Neuroscience2.6%
- Computer Science1.6%
- Psychology1.6%
- Other7%
Topics
- Malaria Research and Control6.5%
- Tuberculosis Research and Epidemiology6.3%
- Mycobacterium research and diagnosis4.1%
- Mosquito-borne diseases and control3%
- Antibiotic Resistance in Bacteria1.8%
- Genetic Associations and Epidemiology1.7%
- Other76.6%
Coauthors
- Susana Campino90
- Jody Phelan79
- Ernest Diez Benavente24
- Martin L. Hibberd22
- Ruth McNerney20
- Colin J. Sutherland19
- Arnab Pain17
- João Perdigão17
- Dominic Kwiatkowski15
- Francesc Coll15
- François Nosten13
- Miguel Viveiros13
- Sarah Auburn13
- Emilia Mańko12
- Julian Parkhill12
- Mark D. Preston12
- Susana G. Campino12
- Anton Spadar11
- Judith R. Glynn11
- Kirk A. Rockett10
- Daniel Ward9
- David J. Conway9
- Isabel Portugal9
- José Afonso Guerra‐Assunção9
All papers
- Survival Analysis Part I: Basic concepts and first analyses
Authors: Taane G. Clark, Mike Bradburn, Sharon Love, Douglas G. Altman - British Journal of Cancer 2003 cited by 1,032
- Integrating informatics tools and portable sequencing technology for rapid detection of resistance to anti-tuberculous drugs
Authors: Jody Phelan, Denise M. O’Sullivan, Diana Machado, Jorge Ramos, Yaa Oppong, Susana Campino, Justin O’Grady, Ruth McNerney, Martin L. Hibberd, Miguel Viveiros, Jim F. Huggett, Taane G. Clark - Genome Medicine 2019 cited by 537
- A robust SNP barcode for typing Mycobacterium tuberculosis complex strains
Authors: Francesc Coll, Ruth McNerney, José Afonso Guerra‐Assunção, Judith R. Glynn, João Perdigão, Miguel Viveiros, Isabel Portugal, Arnab Pain, Nigel Martin, Taane G. Clark - Nature Communications 2014 cited by 789
- The epidemiology, pathogenesis, transmission, diagnosis, and management of multidrug-resistant, extensively drug-resistant, and incurable tuberculosis
Authors: Keertan Dheda, Tawanda Gumbo, Gary Maartens, Kelly E. Dooley, Ruth McNerney, Megan Murray, Jennifer Furin, Edward A. Nardell, Leslie London, Erica Lessem, Grant Theron, Paul D. van Helden, Stefan Niemann, Matthias Merker, David W. Dowdy, Annelies Van Rie, G. G. Siu, Jotam G. Pasipanodya, Camilla Rodrigues, Taane G. Clark, F A Sirgel, Aliasgar Esmail, Hsien-Ho Lin, Sachin Atre, H. Simon Schaaf, Kwok Chiu Chang, Christoph Lange, Payam Nahid, Zarir Udwadia, C. Robert Horsburgh, Gavin Churchyard, Dick Menzies, Anneke C. Hesseling, Eric Nuermberger, Helen McIlleron, Kevin P. Fennelly, Eric Goemaere, Ernesto Jaramillo, Marcus Low, Carolina Morán Jara, Nesri Padayatchi, Robin M. Warren - The Lancet Respiratory Medicine 2017 cited by 679
- A transcriptional switch underlies commitment to sexual development in malaria parasites
Authors: Björn F.C. Kafsack, Núria Rovira‐Graells, Taane G. Clark, Cristina Bancells, Valerie M. Crowley, Susana Campino, April E. Williams, Laura Drought, Dominic Kwiatkowski, David A. Baker, Alfred Cortés, Manuel Llinás - Nature 2014 cited by 580
- Survival Analysis Part II: Multivariate data analysis – an introduction to concepts and methods
Authors: Mike Bradburn, Taane G. Clark, Sharon Love, Doug Altman - British Journal of Cancer 2003 cited by 759
- Large-scale genomic analysis of global Klebsiella pneumoniae plasmids reveals multiple simultaneous clusters of carbapenem-resistant hypervirulent strains
Authors: Anton Spadar, João Perdigão, Susana Campino, Taane G. Clark - Genome Medicine 2023 cited by 68
- External validation of a deep learning electrocardiogram algorithm to detect ventricular dysfunction
Authors: Itzhak Zachi Attia, Andrew S. Tseng, Ernest Diez Benavente, José R. Medina‐Inojosa, Taane G. Clark, Sofia Malyutina, Suraj Kapa, Henrik Schirmer, Alexander V. Kudryavtsev, Peter A. Noseworthy, Rickey E. Carter, Andrew Ryabikov, Pablo Perel, Paul A. Friedman, David A. Leon, Francisco López-Jiménez - International Journal of Cardiology 2021 cited by 80
- Analysis of Plasmodium falciparum diversity in natural infections by deep sequencing
Authors: Magnus Manske, Olivo Miotto, Susana Campino, Sarah Auburn, Jacob Almagro‐Garcia, G. Maslen, Jack C. O’Brien, Abdoulaye Djimdé, Ogobara K. Doumbo, Issaka Zongo, Jean‐Bosco Ouédraogo, P Michon, Ivo Müeller, Peter Siba, Alexis Nzila, Steffen Borrmann, Steven M. Kiara, Kevin Marsh, Hongying Jiang, Xin‐zhuan Su, Chanaki Amaratunga, Rick M. Fairhurst, Duong Socheat, François Nosten, Mallika Imwong, Nicholas J. White, Mandy Sanders, Elisa Anastasi, Dan Alcock, Eleanor Drury, Samuel O. Oyola, Michael A. Quail, Daniel J. Turner, Valentín Ruano-Rubio, Dushyanth Jyothi, Lucas Amenga–Etego, Christina Hubbart, Anna E. Jeffreys, Kate Rowlands, Colin J. Sutherland, Cally Roper, Valentina Mangano, David Modiano, John C. Tan, Michael T. Ferdig, Alfred Amambua‐Ngwa, David J. Conway, Shannon Takala‐Harrison, Christopher V. Plowe, Julian C. Rayner, Kirk A. Rockett, Taane G. Clark, Chris Newbold, Matthew Berriman, Bronwyn MacInnis, Dominic Kwiatkowski - Nature 2012 cited by 539
- Robust barcoding and identification of Mycobacterium tuberculosis lineages for epidemiological and clinical studies
Authors: Gary Napier, Susana Campino, Yared Merid, Markos Abebe, Yimtubezinash Woldeamanuel, Abraham Aseffa, Martin L. Hibberd, Jody Phelan, Taane G. Clark - Genome Medicine 2020 cited by 183
- Genome-wide analysis of multi- and extensively drug-resistant Mycobacterium tuberculosis
Authors: Francesc Coll, Jody Phelan, Grant Hill-Cawthorne, Mridul Nair, Kim Mallard, Shahjahan Ali, Abdallah M. Abdallah, Saad Alghamdi, Mona Alsomali, Abdallah O. Ahmed, Stephanie Portelli, Yaa Oppong, Adriana Alves, Theolis Barbosa, Susana Campino, Maxine Caws, Anirvan Chatterjee, Amelia C. Crampin, Keertan Dheda, Nicholas Furnham, Judith R. Glynn, Louis Grandjean, Dang Minh Ha, Rumina Hasan, Zahra Hasan, Martin L. Hibberd, Moses Joloba, Edward C. Jones‐López, Tomoshige Matsumoto, Anabela Miranda, David Moore, Nora Mocillo, Stefan Panaiotov, Julian Parkhill, Carlos Penha‐Gonçalves, João Perdigão, Isabel Portugal, Zineb Rchiad, Jaime Robledo, Patricia Sheen, Nashwa Talaat Shesha, F A Sirgel, Christophe Sola, Erivelton Oliveira Sousa, Elizabeth M. Streicher, Paul D. van Helden, Miguel Viveiros, Robin M. Warren, Ruth McNerney, Arnab Pain, Taane G. Clark - Nature Genetics 2018 cited by 428
- Bacterial and host determinants of cough aerosol culture positivity in patients with drug-resistant versus drug-susceptible tuberculosis
Authors: Grant Theron, Jason Limberis, Rouxjeane Venter, Lucas Smith, Elize Pietersen, Aliasgar Esmail, Greg Calligaro, Julian te Riele, Marianna de Kock, Paul D. van Helden, Tawanda Gumbo, Taane G. Clark, Kevin P. Fennelly, Robin M. Warren, Keertan Dheda - Nature Medicine 2020 cited by 75
- Genetic Diversity of norA, Coding for a Main Efflux Pump of Staphylococcus aureus
Authors: Sofia Santos Costa, Benjamin Sobkowiak, Ricardo Parreira, Jonathan D. Edgeworth, Miguel Viveiros, Taane G. Clark, Isabel Couto - Frontiers in Genetics 2019 cited by 107
- Targeted Restoration of the Intestinal Microbiota with a Simple, Defined Bacteriotherapy Resolves Relapsing Clostridium difficile Disease in Mice
Authors: Trevor D. Lawley, Simon Clare, Alan W. Walker, Mark Stares, Thomas R. Connor, Claire Raisen, David Goulding, Roland Rad, Fernanda Schreiber, Cordelia Brandt, Laura J. Deakin, Derek Pickard, Sylvia H. Duncan, Harry J. Flint, Taane G. Clark, Julian Parkhill, Gordon Dougan - PLoS Pathogens 2012 cited by 542
- Independent Emergence of Artemisinin Resistance Mutations Among Plasmodium falciparum in Southeast Asia
Authors: Shannon Takala‐Harrison, Christopher G. Jacob, Cesar Arze, Michael P. Cummings, Joana C. Silva, Arjen M. Dondorp, Mark M. Fukuda, Tran Tinh Hien, Mayfong Mayxay, Harald Noedl, François Nosten, Myat Phone Kyaw, Nguyen Thanh Thuy Nhien, Mallika Imwong, Delia Bethell, Youry Se, Chanthap Lon, Stuart D. Tyner, David Saunders, Frédéric Ariey, Odile Mercereau‐Puijalon, Didier Ménard, Paul N. Newton, Maniphone Khanthavong, Bouasy Hongvanthong, Peter Starzengrüber, Hans‐Peter Fuehrer, Paul Swoboda, Wasif Ali Khan, Aung Pyae Phyo, Myaing M. Nyunt, Myat Htut Nyunt, Tyler S. Brown, Matthew Adams, Christopher S. Pepin, Jason A. Bailey, John C. Tan, Michael T. Ferdig, Taane G. Clark, Olivo Miotto, Bronwyn MacInnis, Dominic Kwiatkowski, Nicholas J. White, Pascal Ringwald, Christopher V. Plowe - The Journal of Infectious Diseases 2014 cited by 448
- Rapid determination of anti-tuberculosis drug resistance from whole-genome sequences
Authors: Francesc Coll, Ruth McNerney, Mark D. Preston, José Afonso Guerra‐Assunção, Andrew Warry, Grant Hill-Cawthorne, Kim Mallard, Mridul Nair, Anabela Miranda, Adriana Alves, João Perdigão, Miguel Viveiros, Isabel Portugal, Zahra Hasan, Rumina Hasan, Judith R. Glynn, Nigel Martin, Arnab Pain, Taane G. Clark - Genome Medicine 2015 cited by 425
- Machine Learning Predicts Accurately Mycobacterium tuberculosis Drug Resistance From Whole Genome Sequencing Data
Authors: Wouter Deelder, Sofia Christakoudi, Jody Phelan, Ernest Diez Benavente, Susana Campino, Ruth McNerney, Luigi Palla, Taane G. Clark - Frontiers in Genetics 2019 cited by 92
- The Governance and Implementation of the National Action Plan on Antimicrobial Resistance in Tanzania: A Qualitative Study
Authors: Gasto Frumence, Leonard E. G. Mboera, Calvin Sindato, Bugwesa Z. Katale, Sharadhuli I. Kimera, Emmy Metta, Anna Durrance‐Bagale, Anne-Sophie Jung, Stephen E. Mshana, Taane G. Clark, Mark M. Rweyemamu, Helena Legido‐Quigley, Mecky Matee - Antibiotics 2021 cited by 84
- Knowledge, attitudes and practices regarding antimicrobial use and resistance among communities of Ilala, Kilosa and Kibaha districts of Tanzania
Authors: Calvin Sindato, Leonard E. G. Mboera, Bugwesa Z. Katale, Gasto Frumence, Sharadhuli I. Kimera, Taane G. Clark, Helena Legido‐Quigley, Stephen E. Mshana, Mark M. Rweyemamu, Mecky Matee - Antimicrobial Resistance and Infection Control 2020 cited by 82
- Deep learning-derived cardiovascular age shares a genetic basis with other cardiac phenotypes
Authors: Julian Libiseller-Egger, Jody Phelan, Zachi I. Attia, Ernest Diez Benavente, Susana Campino, Paul A. Friedman, Francisco Lopez‐Jimenez, David A. Leon, Taane G. Clark - Scientific Reports 2022 cited by 34
- Survival Analysis Part III: Multivariate data analysis – choosing a model and assessing its adequacy and fit
Authors: Mike Bradburn, Taane G. Clark, Sharon Love, Douglas G. Altman - British Journal of Cancer 2003 cited by 398
- Large-scale whole genome sequencing of M. tuberculosis provides insights into transmission in a high prevalence area
Authors: José Afonso Guerra‐Assunção, Amelia C. Crampin, RMGJ Houben, Themba Mzembe, Kim Mallard, Francesc Coll, Palwasha Khan, Louis Banda, Arthur Chiwaya, RPA Pereira, Ruth McNerney, PEM Fine, Julian Parkhill, Taane G. Clark, JR Glynn - eLife 2015 cited by 270
- How Myalgic Encephalomyelitis/Chronic Fatigue Syndrome (ME/CFS) Progresses: The Natural History of ME/CFS
Authors: Luís Nacul, Shennae O’Boyle, Luigi Palla, Flávio E. Nácul, Kathleen Mudie, Caroline C. Kingdon, Jacqueline M. Cliff, Taane G. Clark, Hazel M. Dockrell, Eliana Lacerda - Frontiers in Neurology 2020 cited by 107
- Genetic diversity of candidate loci linked to Mycobacterium tuberculosis resistance to bedaquiline, delamanid and pretomanid
Authors: Paula Josefina Gómez, João Perdigão, Pedro Gomes, Zully M. Puyén, David Santos-Lázaro, Gary Napier, Martin L. Hibberd, Miguel Viveiros, Isabel Portugal, Susana Campino, Jody Phelan, Taane G. Clark - Scientific Reports 2021 cited by 67
