Robin M. Warren
Active 1992–2025
- 212
- Papers
- 28,446
- Citations
- 94
- h-index
- 193
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Medicine58.1%
- Biochemistry, Genetics and Molecular Biology27.7%
- Immunology and Microbiology6.5%
- Dentistry1.7%
- Agricultural and Biological Sciences1.2%
- Environmental Science1.1%
- Other3.7%
Topics
- Tuberculosis Research and Epidemiology14.6%
- Mycobacterium research and diagnosis8.7%
- Gut microbiota and health4.9%
- Infectious Diseases and Tuberculosis3.3%
- Diagnosis and treatment of tuberculosis3.2%
- Pneumocystis jirovecii pneumonia detection and treatment1.9%
- Other63.4%
Coauthors
- Paul D. van Helden84
- Elizabeth M. Streicher44
- Grant Theron31
- Annelies Van Rie26
- Keertan Dheda26
- Anzaan Dippenaar25
- Nicolaas C. Gey van Pittius24
- Nulda Beyers19
- Michele A. Miller16
- Samantha L. Sampson15
- Sébastien Gagneux15
- Thomas C. Victor15
- Wynand J. Goosen15
- Gian van der Spuy14
- Karen R. Jacobson14
- T. C. Victor14
- Frederick A. Sirgel12
- Tanya J. Kerr12
- Margaretha de Vos11
- Megan Murray11
- Helen Cox10
- Robert A. Holt10
- Robert P. Gie10
- Tim H. Heupink10
All papers
- Fusobacterium nucleatum infection is prevalent in human colorectal carcinoma
Authors: Mauro Castellarin, Robin M. Warren, Jamie Freeman, Lisa Dreolini, Martin Krzywinski, Jaclyn Strauss, Rebecca Barnes, Peter H. Watson, Emma Allen‐Vercoe, Richard A. Moore, Robert A. Holt - Genome Research 2011 cited by 2,063
- Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issues
Authors: Conor J. Meehan, Galo A. Goig, Thomas A. Kohl, Lennert Verboven, Anzaan Dippenaar, Matthew Ezewudo, Maha Farhat, Jennifer L. Guthrie, Kris Laukens, Paolo Miotto, Boatema Ofori-Anyinam, Viola Dreyer, Philip Supply, Anita Suresh, Christian Utpatel, Dick van Soolingen, Yang Zhou, Philip Ashton, Daniela Brites, Andrea Maurizio Cabibbe, Bouke C. de Jong, Margaretha de Vos, Fabrizio Menardo, Sébastien Gagneux, Qian Gao, Tim H. Heupink, Qingyun Liu, Chloé Loiseau, Leen Rigouts, Timothy C. Rodwell, Elisa Tagliani, A Sarah Walker, Robin M. Warren, Yanlin Zhao, Matteo Zignol, Marco Schito, Jennifer L. Gardy, Daniela María Cirillo, Stefan Niemann, Iñaki Comas, Annelies Van Rie - Nature Reviews Microbiology 2019 cited by 429
- The epidemiology, pathogenesis, transmission, diagnosis, and management of multidrug-resistant, extensively drug-resistant, and incurable tuberculosis
Authors: Keertan Dheda, Tawanda Gumbo, Gary Maartens, Kelly E. Dooley, Ruth McNerney, Megan Murray, Jennifer Furin, Edward A. Nardell, Leslie London, Erica Lessem, Grant Theron, Paul D. van Helden, Stefan Niemann, Matthias Merker, David W. Dowdy, Annelies Van Rie, G. G. Siu, Jotam G. Pasipanodya, Camilla Rodrigues, Taane G. Clark, F A Sirgel, Aliasgar Esmail, Hsien-Ho Lin, Sachin Atre, H. Simon Schaaf, Kwok Chiu Chang, Christoph Lange, Payam Nahid, Zarir Udwadia, C. Robert Horsburgh, Gavin Churchyard, Dick Menzies, Anneke C. Hesseling, Eric Nuermberger, Helen McIlleron, Kevin P. Fennelly, Eric Goemaere, Ernesto Jaramillo, Marcus Low, Carolina Morán Jara, Nesri Padayatchi, Robin M. Warren - The Lancet Respiratory Medicine 2017 cited by 679
- Bedaquiline resistance in patients with drug-resistant tuberculosis in Cape Town, South Africa: a retrospective longitudinal cohort study
Authors: Brigitta Derendinger, Anzaan Dippenaar, Margaretha de Vos, Stella Huo, Rencia Alberts, Rebecca Tadokera, Jason Limberis, F A Sirgel, Tania Dolby, Claudia Spies, Anja Reuter, Megan Folkerts, Christopher J. Allender, Darrin Lemmer, Annelies Van Rie, Sébastien Gagneux, Leen Rigouts, Julian te Riele, Keertan Dheda, David M. Engelthaler, Robin M. Warren, John Metcalfe, Helen Cox, Grant Theron - The Lancet Microbe 2023 cited by 101
- Co-occurrence of anaerobic bacteria in colorectal carcinomas
Authors: Robin M. Warren, Douglas J Freeman, Stephen Pleasance, Peter H. Watson, Richard A. Moore, Kyla Cochrane, Emma Allen‐Vercoe, Robert A. Holt - Microbiome 2013 cited by 354
- Neo-antigens predicted by tumor genome meta-analysis correlate with increased patient survival
Authors: Scott D. Brown, Robin M. Warren, Ewan A. Gibb, Spencer D. Martin, John J. Spinelli, Brad H. Nelson, Robert A. Holt - Genome Research 2014 cited by 617
- Evaluation of Nanopore sequencing for Mycobacterium tuberculosis drug susceptibility testing and outbreak investigation: a genomic analysis
Authors: Michael B. Hall, Marie Sylvianne Rabodoarivelo, Anastasia Koch, Anzaan Dippenaar, Sophie George, Melanie Grobbelaar, Robin M. Warren, A Sarah Walker, Helen Cox, Sébastien Gagneux, Derrick W. Crook, Tim Peto, Niaina Rakotosamimanana, Simon Grandjean Lapierre, Zamin Iqbal - The Lancet Microbe 2022 cited by 89
- Evolutionary history and global spread of the Mycobacterium tuberculosis Beijing lineage
Authors: Matthias Merker, Camille Blin, Stefano Mona, Nicolas Duforet-Frebourg, Sophie Lecher, Eve Willery, Michaël G. B. Blum, Sabine Rüsch–Gerdes, Igor Mokrousov, Eman Aleksic, Caroline Allix‐Béguec, Annick Antierens, Ewa Augustynowicz–Kopeć, Marie Ballif, Francesca Barletta, Hans‐Peter Beck, Clifton E. Barry, Maryline Bonnet, Emanuele Borroni, Isolina Campos-Herrero, Daniela María Cirillo, Helen Cox, Suzanne M. Crowe, Valeriu Crudu, Roland Diel, Francis Drobniewski, Maryse Fauville‐Dufaux, Sébastien Gagneux, Solomon Ghebremichael, M. Hanekom, Sven Hoffner, Wei-wei Jiao, Stobdan Kalon, Thomas A. Kohl, Irina Kontsevaya, Troels Lillebæk, Shinji Maeda, Vladyslav Nikolayevskyy, Michael Rasmussen, Nalin Rastogi, Sofía Samper, Elisabeth Sánchez-Padilla, Branislava Savić, Isdore Chola Shamputa, Adong Shen, Li‐Hwei Sng, Petras Stakėnas, Kadri Toit, Francis Varaine, Dragana Vuković, Céline Wahl, Robin M. Warren, Philip Supply, Stefan Niemann, Thierry Wirth - Nature Genetics 2015 cited by 562
- Complete Haplotype Sequence of the Human Immunoglobulin Heavy-Chain Variable, Diversity, and Joining Genes and Characterization of Allelic and Copy-Number Variation
Authors: Corey T. Watson, Karyn Meltz Steinberg, John Huddleston, Robin M. Warren, Maika Malig, Jacqueline E. Schein, A. Jeremy Willsey, Jeffrey B. Joy, Jamie K. Scott, Tina Graves, Richard K. Wilson, Robert A. Holt, Evan E. Eichler, Felix Breden - The American Journal of Human Genetics 2013 cited by 269
- Evolution of rifampicin treatment for tuberculosis
Authors: Melanie Grobbelaar, Gail Louw, Samantha L. Sampson, Paul D. van Helden, Peter R. Donald, Robin M. Warren - Infection Genetics and Evolution 2019 cited by 125
- Genome-wide analysis of multi- and extensively drug-resistant Mycobacterium tuberculosis
Authors: Francesc Coll, Jody Phelan, Grant Hill-Cawthorne, Mridul Nair, Kim Mallard, Shahjahan Ali, Abdallah M. Abdallah, Saad Alghamdi, Mona Alsomali, Abdallah O. Ahmed, Stephanie Portelli, Yaa Oppong, Adriana Alves, Theolis Barbosa, Susana Campino, Maxine Caws, Anirvan Chatterjee, Amelia C. Crampin, Keertan Dheda, Nicholas Furnham, Judith R. Glynn, Louis Grandjean, Dang Minh Ha, Rumina Hasan, Zahra Hasan, Martin L. Hibberd, Moses Joloba, Edward C. Jones‐López, Tomoshige Matsumoto, Anabela Miranda, David Moore, Nora Mocillo, Stefan Panaiotov, Julian Parkhill, Carlos Penha‐Gonçalves, João Perdigão, Isabel Portugal, Zineb Rchiad, Jaime Robledo, Patricia Sheen, Nashwa Talaat Shesha, F A Sirgel, Christophe Sola, Erivelton Oliveira Sousa, Elizabeth M. Streicher, Paul D. van Helden, Miguel Viveiros, Robin M. Warren, Ruth McNerney, Arnab Pain, Taane G. Clark - Nature Genetics 2018 cited by 428
- A standardised method for interpreting the association between mutations and phenotypic drug resistance inMycobacterium tuberculosis
Authors: Paolo Miotto, Belay Tessema, Elisa Tagliani, Leonid Chindelevitch, Angela M. Starks, Claudia Emerson, Debra Hanna, Peter Kim, Richard Liwski, Matteo Zignol, Christopher Gilpin, Stefan Niemann, Claudia M. Denkinger, Joy Fleming, Robin M. Warren, Derrick W. Crook, James E. Posey, Sébastien Gagneux, Sven Hoffner, Camilla Rodrigues, Iñaki Comas, David M. Engelthaler, Megan Murray, David Alland, Leen Rigouts, Christoph Lange, Keertan Dheda, Rumina Hasan, Uma Devi Ranganathan, Ruth McNerney, Matthew Ezewudo, Daniela María Cirillo, Marco Schito, Claudio U. Köser, Timothy C. Rodwell - European Respiratory Journal 2017 cited by 333
- Bacterial and host determinants of cough aerosol culture positivity in patients with drug-resistant versus drug-susceptible tuberculosis
Authors: Grant Theron, Jason Limberis, Rouxjeane Venter, Lucas Smith, Elize Pietersen, Aliasgar Esmail, Greg Calligaro, Julian te Riele, Marianna de Kock, Paul D. van Helden, Tawanda Gumbo, Taane G. Clark, Kevin P. Fennelly, Robin M. Warren, Keertan Dheda - Nature Medicine 2020 cited by 75
- Genetic variants and their association with phenotypic resistance to bedaquiline in Mycobacterium tuberculosis: a systematic review and individual isolate data analysis
Authors: Nabila Ismail, Emmanuel Rivière, Jason Limberis, Stella Huo, John Metcalfe, Robin M. Warren, Annelies Van Rie - The Lancet Microbe 2021 cited by 68
- Comparison of two diagnostic intervention packages for community-based active case finding for tuberculosis: an open-label randomized controlled trial
Authors: Aliasgar Esmail, Philippa Randall, Suzette Oelofse, Michele Tomasicchio, Anil Pooran, Richard Meldau, Edson Makambwa, Lynelle Mottay, Shameem Z. Jaumdally, Greg Calligaro, Stuart Meier, Marianna de Kock, Tawanda Gumbo, Robin M. Warren, Keertan Dheda - Nature Medicine 2023 cited by 27
- The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse
Authors: Michael P. McLeod, Robin M. Warren, William Hsiao, Naoto Araki, Matthew Myhre, Clinton Fernandes, Daisuke Miyazawa, Wendy Wong, Anita L. Lillquist, Dennis Wang, Manisha Dosanjh, Hirofumi Hara, Anca S. Petrescu, Ryan D. Morin, George Yang, Jeff Stott, Jacqueline E. Schein, Heesun Shin, Duane E. Smailus, Asim Siddiqui, Marco A. Marra, Steven J.M. Jones, Robert A. Holt, Fiona S. L. Brinkman, Keisuke Miyauchi, Masao Fukuda, Julian Davies, William W. Mohn, Lindsay D. Eltis - National Academy of Sciences, Proceedings of the National Academy of Sciences 2006 cited by 635
- Detection of tuberculosis by automatic cough sound analysis
Authors: Gert Hendrik Renier Botha, Grant Theron, Robin M. Warren, Marisa Klopper, Keertan Dheda, Paul D. van Helden, Thomas Niesler - Physiological Measurement 2018 cited by 127
- Mutational evolution in a lobular breast tumour profiled at single nucleotide resolution
Authors: Sohrab P. Shah, Ryan D. Morin, Jaswinder Khattra, Leah Prentice, Trevor J. Pugh, Angela Burleigh, Allen Delaney, Karen A. Gelmon, Ryan Guliany, Janine Senz, Christian Steidl, Robert A. Holt, Steven J.M. Jones, Mark Sun, Gillian Leung, Richard A. Moore, Tesa Severson, Greg Taylor, Andrew E. Teschendorff, Kane Tse, Gulisa Turashvili, Richard Varhol, Robin M. Warren, Peter H. Watson, Yongjun Zhao, Carlos Caldas, David G. Huntsman, Martin Hirst, Marco A. Marra, Samuel Aparício - Nature 2009 cited by 1,081
- A New Phylogenetic Framework for the Animal-Adapted Mycobacterium tuberculosis Complex
Authors: Daniela Brites, Chloé Loiseau, Fabrizio Menardo, Sònia Borrell, María Beatrice Boniotti, Robin M. Warren, Anzaan Dippenaar, Sven D.C. Parsons, Christian Beisel, Marcel A. Behr, Janet Fyfe, Mireia Coscollá, Sébastien Gagneux - Frontiers in Microbiology 2018 cited by 206
- Genetic Determinants of Drug Resistance in Mycobacterium tuberculosis and Their Diagnostic Value
Authors: Maha Farhat, Răzvan Sultana, Oleg Iartchouk, Sam Bozeman, James E. Galagan, Peter Sisk, Christian Stolte, Hanna Nebenzahl-Guimaraes, Karen R. Jacobson, Alexander Sloutsky, Devinder Kaur, James E. Posey, Barry N. Kreiswirth, Natalia Kurepina, Leen Rigouts, Elizabeth M. Streicher, Tommie C. Victor, Robin M. Warren, Dick van Soolingen, Megan Murray - American Journal of Respiratory and Critical Care Medicine 2016 cited by 157
- Nanopore Sequencing for Mycobacterium tuberculosis: a Critical Review of the Literature, New Developments, and Future Opportunities
Authors: Anzaan Dippenaar, Sander N. Goossens, Melanie Grobbelaar, Selien Oostvogels, Bart Cuypers, Kris Laukens, Conor J. Meehan, Robin M. Warren, Annelies Van Rie - Journal of Clinical Microbiology 2021 cited by 58
- High fluoroquinolone resistance proportions among multidrug-resistant tuberculosis driven by dominant L2 Mycobacterium tuberculosis clones in the Mumbai Metropolitan Region
Authors: Viola Dreyer, Ayan Mandal, Prachi Dev, Matthias Merker, Ivan Barilar, Christian Utpatel, Kayzad Nilgiriwala, Camilla Rodrigues, Derrick W. Crook, Derrick W. Crook, Tim Peto, A. Sarah Walker, Sarah Hoosdally, Ana Lúıza Gibertoni Cruz, Joshua A. Carter, Sarah G. Earle, Samaneh Kouchaki, Yang Yang, A Sarah Walker, Philip W. Fowler, Daniel J. Wilson, David A. Clifton, Zamin Iqbal, Martin Hunt, Jeff Knaggs, Daniela M. Cirillo, Emanuele Borroni, Simone Battaglia, Arash Ghodousi, Andrea Spitaleri, Andrea Maurizio Cabibbe, Sabira Tahseen, Kayzad Nilgiriwala, Sanchi Shah, Camilla Rodrigues, Priti Kambli, Utkarsha Surve, Rukhsar Khot, Stefan Niemann, Thomas A. Kohl, Matthias Merker, Harald Hoffmann, Katharina Todt, Sara Plesnik, Nazir Ismail, Shaheed Vally Omar, Lavania Joseph Dumisani Ngcamu, Nana Okozi, Shen Yuan Yao, Guy Thwaites, Thuong Nguyen Thuy Thuong, Nhung Hoang Ngoc, Srinivasan Vijay, David Moore, Jorge Coronel, Walter Solano, George F. Gao, Guangxue He, Yanlin Zhao, Aijing Ma, Chunfa Liu, Baoli Zhu, Ian F. Laurenson, Pauline Claxton, Robert J. Wilkinson, Anastasia Koch, Ajit Lalvani, James E. Posey, Jennifer L. Gardy, Jim Werngren, Nicholas I. Paton, Ruwen Jou, Mei-Hua Wu, Yu-Xin Xiao, Lucilaine Ferrazoli, Rosângela Siqueira de Oliveira, James Millard, Robin M. Warren, Annelies Van Rie, Simon Grandjean Lapierre, Marie Sylvianne Rabodoarivelo, Niaina Rakotosamimanana, Camus Nimmo, Kimberlee A. Musser, Vincent Escuyer, Ted Cohen, Jean‐Philippe Rasigade, Thierry Wirth, Nerges Mistry, Stefan Niemann - Genome Medicine 2022 cited by 48
- Evolution and expansion of the Mycobacterium tuberculosis PE and PPE multigene families and their association with the duplication of the ESAT-6 (esx) gene cluster regions.
Authors: Nicolaas C. Gey van Pittius, Samantha L. Sampson, Hyeyoung Lee, Yeun Kim, Paul D. van Helden, Robin M. Warren - BMC Evolutionary Biology 2006 cited by 429
- Derivation of HLA types from shotgun sequence datasets
Authors: Robin M. Warren, Gina Choe, Douglas J Freeman, Mauro Castellarin, Sarah Munro, Richard A. Moore, Robert A. Holt - Genome Medicine 2012 cited by 205
