Brendan MacLean
2005–2025 年に発表
- 58
- 論文数
- 21,092
- 被引用数
- 39
- h 指数
- 52
- i10 指数
被引用数
引用元
国・地域
機関
分野
- Biochemistry, Genetics and Molecular Biology41.6%
- Chemistry22%
- Medicine21.3%
- Agricultural and Biological Sciences3.9%
- Immunology and Microbiology3.1%
- Environmental Science2.3%
- その他5.8%
トピック
- Advanced Proteomics Techniques and Applications9.1%
- Metabolomics and Mass Spectrometry Studies7.6%
- Mass Spectrometry Techniques and Applications5.9%
- Glycosylation and Glycoproteins Research1.4%
- Ubiquitin and proteasome pathways1.3%
- RNA and protein synthesis mechanisms1.3%
- その他73.4%
共著者
- Michael J. MacCoss41
- Nicholas Shulman17
- Vagisha Sharma12
- Jarrett D. Egertson8
- Birgit Schilling7
- Brian Pratt7
- Michael Riffle7
- Steven A. Carr7
- Chris Hsu6
- Christine C. Wu6
- Olga Vitek6
- Philip M. Remes6
- Alexey I. Nesvizhskii5
- Amanda G. Paulovich5
- Andrew N. Hoofnagle5
- Bradford W. Gibson5
- Gennifer E. Merrihew5
- Lukas Reiter5
- Matthew Chambers5
- Ruedi Aebersold5
- Barbara Frewen4
- Brian C. Searle4
- Daniela M. Tomazela4
- Deanna L. Plubell4
全論文
- A cross-platform toolkit for mass spectrometry and proteomics
著者: Matthew Chambers, Brendan MacLean, Robert Burke, Dario Amodei, Daniel Ruderman, Steffen Neumann, Laurent Gatto, Bernd Fischer, Brian Pratt, Jarrett D. Egertson, Katherine Hoff, Darren Kessner, Natalie Tasman, Nicholas Shulman, Barbara Frewen, Tahmina A Baker, Mi‐Youn Brusniak, Christopher Paulse, David M. Creasy, Lisa Flashner, Kian Kani, Chris Moulding, Sean L. Seymour, Lydia M. Nuwaysir, Brent Lefebvre, Frank E. Kuhlmann, Joe Roark, Rainer Paape, Detlev Suckau, Tina Hemenway, Andreas Hühmer, James Langridge, B. Connolly, Trey Chadick, Krisztina Holly, Josh Eckels, Eric W. Deutsch, Robert L. Moritz, Jonathan E. Katz, David B. Agus, Michael J. MacCoss, David L. Tabb, Parag Mallick - Nature Biotechnology 2012 被引用: 4,308
- Skyline: an open source document editor for creating and analyzing targeted proteomics experiments
著者: Brendan MacLean, Daniela M. Tomazela, Nicholas Shulman, Matthew Chambers, Gregory L. Finney, Barbara Frewen, Randall Kern, David L. Tabb, Daniel C. Liebler, Michael J. MacCoss - Bioinformatics, Bioinform. 2010 被引用: 4,966
- The ProteomeXchange consortium at 10 years: 2023 update
著者: Eric W. Deutsch, Nuno Bandeira, Yasset Pérez-Riverol, Vagisha Sharma, Jeremy Carver, Luis Mendoza, Deepti Jaiswal Kundu, Shengbo Wang, Chakradhar Bandla, Selvakumar Kamatchinathan, Suresh Hewapathirana, Benjamin S. Pullman, Julie Wertz, Zhi Sun, Shin Kawano, Shujiro Okuda, Yu Watanabe, Brendan MacLean, Michael J. MacCoss, Yunping Zhu, Yasushi Ishihama, Juan Antonio Vizcaíno - Nucleic Acids Research, Nucleic Acids Res. 2022 被引用: 865
- The Skyline ecosystem: Informatics for quantitative mass spectrometry proteomics
著者: Lindsay K. Pino, Brian C. Searle, James G. Bollinger, Brook L. Nunn, Brendan MacLean, Michael J. MacCoss - Mass Spectrometry Reviews 2017 被引用: 887
- MSstats: an R package for statistical analysis of quantitative mass spectrometry-based proteomic experiments
著者: Meena Choi, Ching-Yun Chang, Timothy Clough, Daniel Broudy, Trevor Killeen, Brendan MacLean, Olga Vitek - Bioinformatics, Bioinform. 2014 被引用: 1,155
- Skyline for Small Molecules: A Unifying Software Package for Quantitative Metabolomics
著者: Kendra J. Adams, Brian Pratt, Neelanjan Bose, Laura G. Dubois, Lisa St. John‐Williams, Kevin M. Perrott, Karina Ky, Pankaj Kapahi, Vagisha Sharma, Michael J. MacCoss, M. Arthur Moseley, Carol A. Colton, Brendan MacLean, Birgit Schilling, J. Will Thompson, Alzheimer’s Disease Metabolomics Consortium - Journal of Proteome Research 2020 被引用: 627
- Chromatogram libraries improve peptide detection and quantification by data independent acquisition mass spectrometry
著者: Brian C. Searle, Lindsay K. Pino, Jarrett D. Egertson, Ying S. Ting, Robert Lawrence, Brendan MacLean, Judit Villén, Michael J. MacCoss - Nature Communications 2018 被引用: 585
- The ProteomeXchange consortium in 2020: enabling 'big data' approaches in proteomics
著者: Eric W. Deutsch, Nuno Bandeira, Vagisha Sharma, Yasset Pérez-Riverol, Jeremy Carver, Deepti Jaiswal Kundu, David García-Seisdedos, Andrew F. Jarnuczak, Suresh Hewapathirana, Benjamin S. Pullman, Julie Wertz, Zhi Sun, Shin Kawano, Shujiro Okuda, Yu Watanabe, Henning Hermjakob, Brendan MacLean, Michael J. MacCoss, Yunping Zhu, Yasushi Ishihama, Juan Antonio Vizcaíno - Nucleic Acids Research, Nucleic Acids Res. 2019 被引用: 778
- Using iRT, a normalized retention time for more targeted measurement of peptides
著者: Claudia Escher, Lukas Reiter, Brendan MacLean, Reto Ossola, Franz Herzog, John Chilton, Michael J. MacCoss, Oliver Rinner - PROTEOMICS 2012 被引用: 634
- MSstats Version 4.0: Statistical Analyses of Quantitative Mass Spectrometry-Based Proteomic Experiments with Chromatography-Based Quantification at Scale
著者: Devon Kohler, Mateusz Staniak, Tsung‐Heng Tsai, Ting Huang, Nicholas Shulman, Oliver M. Bernhardt, Brendan MacLean, Alexey I. Nesvizhskii, Lukas Reiter, Eduard Sabidó, Meena Choi, Olga Vitek - Journal of Proteome Research 2023 被引用: 129
- Panorama Public: A Public Repository for Quantitative Data Sets Processed in Skyline
著者: Vagisha Sharma, Josh Eckels, Birgit Schilling, Christina Ludwig, Jacob D. Jaffe, Michael J. MacCoss, Brendan MacLean - Molecular & Cellular Proteomics 2018 被引用: 285
- A multicenter study benchmarks software tools for label-free proteome quantification
著者: Pedro Navarro, Jörg Kuharev, Ludovic Gillet, Oliver M. Bernhardt, Brendan MacLean, Hannes Röst, Stephen Tate, Chih‐Chiang Tsou, Lukas Reiter, Ute Distler, George Rosenberger, Yasset Pérez‐Riverol, Alexey I. Nesvizhskii, Ruedi Aebersold, Stefan Tenzer - Nature Biotechnology 2016 被引用: 385
- Improving Precursor Selectivity in Data-Independent Acquisition Using Overlapping Windows
著者: Dario Amodei, Jarrett D. Egertson, Brendan MacLean, Richard S. Johnson, Gennifer E. Merrihew, Austin W. Keller, D. C. B. Marsh, Olga Vitek, Parag Mallick, Michael J. MacCoss - Journal of the American Society for Mass Spectrometry 2019 被引用: 166
- Multiplexed peptide analysis using data-independent acquisition and Skyline
著者: Jarrett D. Egertson, Brendan MacLean, Richard S. Johnson, Yue Xuan, Michael J. MacCoss - Nature Protocols 2015 被引用: 225
- Peptide-Centric Proteome Analysis: An Alternative Strategy for the Analysis of Tandem Mass Spectrometry Data
著者: Ying S. Ting, Jarrett D. Egertson, Samuel Payne, Sangtae Kim, Brendan MacLean, Lukas Käll, Ruedi Aebersold, Richard Smith, William Stafford Noble, Michael J. MacCoss - Molecular & Cellular Proteomics 2015 被引用: 199
- LipidCreator workbench to probe the lipidomic landscape
著者: Bing Peng, Dominik Kopczynski, Brian Pratt, Christer S. Ejsing, Bo Burla, Martin Hermansson, Peter I. Benke, Sock Hwee Tan, Mark Y. Chan, Federico Torta, Dominik Schwudke, Sven W. Meckelmann, Cristina Coman, Oliver J. Schmitz, Brendan MacLean, Mailin-Christin Manke, Oliver Borst, Markus R. Wenk, Nils Hoffmann, Robert Ahrends - Nature Communications 2020 被引用: 95
- Targeted Peptide Measurements in Biology and Medicine: Best Practices for Mass Spectrometry-based Assay Development Using a Fit-for-Purpose Approach
著者: Steven A. Carr, Susan E. Abbatiello, Bradley L. Ackermann, Christoph H. Borchers, Bruno Domon, Eric W. Deutsch, Russell P. Grant, Andrew N. Hoofnagle, Ruth Hüttenhain, John M. Koomen, D.C. Liebler, Tao Liu, Brendan MacLean, D.R. Mani, Elizabeth Mansfield, Hendrik Neubert, Amanda G. Paulovich, Lukas Reiter, Olga Vitek, Ruedi Aebersold, Leigh Anderson, Robert A. Bethem, Josip Blonder, Emily S. Boja, Julianne Cook Botelho, Michael S. Boyne, Ralph Bradshaw, Alma L. Burlingame, Daniel W. Chan, Hasmik Keshishian, Eric Kuhn, Christopher R. Kinsinger, Jerry Lee, Sang‐Won Lee, Robert L. Moritz, Juan A. Osés-Prieto, Nader Rifai, James Ritchie, Henry Rodriguez, Pothur R. Srinivas, R. Reid Townsend, Jennifer E. Van Eyk, Gordon Whiteley, Arun P. Wiita, Susan T. Weintraub - Molecular & Cellular Proteomics 2014 被引用: 557
- Building high-quality assay libraries for targeted analysis of SWATH MS data
著者: Olga T. Schubert, Ludovic Gillet, Ben C. Collins, Pedro Navarro, George Rosenberger, Witold Wolski, Henry Lam, Dario Amodei, Parag Mallick, Brendan MacLean, Ruedi Aebersold - Nature Protocols 2015 被引用: 333
- Statistical control of peptide and protein error rates in large-scale targeted data-independent acquisition analyses
著者: George Rosenberger, Isabell Bludau, Uwe Schmitt, Moritz Heusel, Christie L. Hunter, Yansheng Liu, Michael J. MacCoss, Brendan MacLean, Alexey I. Nesvizhskii, Patrick G. A. Pedrioli, Lukas Reiter, Hannes Röst, Stephen Tate, Ying S. Ting, Ben C. Collins, Ruedi Aebersold - Nature Methods 2017 被引用: 229
- CPTAC Assay Portal: a repository of targeted proteomic assays
著者: Jeffrey R. Whiteaker, Goran N. Halusa, Andrew N. Hoofnagle, Vagisha Sharma, Brendan MacLean, Ping Yan, John A. Wrobel, Jacob J. Kennedy, D.R. Mani, Lisa J. Zimmerman, Matthew R. Meyer, Mehdi Mesri, Henry Rodriguez, Amanda G. Paulovich - Nature Methods 2014 被引用: 265
- Multiplexed MS/MS for improved data-independent acquisition
著者: Jarrett D. Egertson, Andreas Kuehn, Gennifer E. Merrihew, Nicholas W. Bateman, Brendan MacLean, Ying S. Ting, Jesse D. Canterbury, Donald M Marsh, Markus Kellmann, Vlad Zabrouskov, Christine C. Wu, Michael J. MacCoss - Nature Methods 2013 被引用: 307
- Evaluating the Performance of the Astral Mass Analyzer for Quantitative Proteomics Using Data Independent Acquisition
著者: Lilian R. Heil, Eugen Damoc, Tabiwang N. Arrey, Anna Pashkova, Eduard Denisov, J. Petzoldt, Amelia C. Peterson, Chris Hsu, Brian C. Searle, Nicholas Shulman, Michael Riffle, B. Connolly, Brendan MacLean, Philip M. Remes, Michael W. Senko, Hamish Stewart, Christian Hock, Alexander Makarov, Daniel Hermanson, Vlad Zabrouskov, Christine C. Wu, Michael J. MacCoss - Journal of Proteome Research 2023 被引用: 231
- Utilizing Skyline to analyze lipidomics data containing liquid chromatography, ion mobility spectrometry and mass spectrometry dimensions
著者: Kaylie I. Kirkwood‐Donelson, Brian Pratt, Nicholas Shulman, Kaipo Tamura, Michael J. MacCoss, Brendan MacLean, Erin Baker - Nature Protocols 2022 被引用: 62
- Panorama: A Targeted Proteomics Knowledge Base
著者: Vagisha Sharma, Josh Eckels, Greg Taylor, Nicholas Shulman, Andrew B. Stergachis, Shannon Joyner, Ping Yan, Jeffrey R. Whiteaker, Goran N. Halusa, Birgit Schilling, Bradford W. Gibson, Christopher M. Colangelo, Amanda G. Paulovich, Steven A. Carr, Jacob D. Jaffe, Michael J. MacCoss, Brendan MacLean - Journal of Proteome Research 2014 被引用: 233
