Shujiro Okuda
1990–2025 年に発表
- 84
- 論文数
- 28,408
- 被引用数
- 44
- h 指数
- 77
- i10 指数
被引用数
引用元
国・地域
機関
分野
- Biochemistry, Genetics and Molecular Biology56.5%
- Medicine18.9%
- Agricultural and Biological Sciences7.4%
- Environmental Science3.6%
- Immunology and Microbiology3%
- Chemistry2.3%
- その他8.3%
トピック
- Gut microbiota and health11.2%
- Diet and metabolism studies3.8%
- Genomics and Phylogenetic Studies2.9%
- Clostridium difficile and Clostridium perfringens research2.4%
- Bioinformatics and Genomic Networks2.3%
- Probiotics and Fermented Foods1.9%
- その他75.5%
共著者
- Toshifumi Wakai15
- Yiwei Ling15
- Hiroshi Ichikawa13
- Shin Kawano13
- Yu Watanabe13
- Yoshifumi Shimada12
- Masayuki Nagahashi11
- Susumu Goto11
- Kiyoko F. Aoki-Kinoshita10
- Akiyasu C. Yoshizawa9
- Minoru Kanehisa9
- Yasushi Ishihama9
- Toshiaki Katayama8
- Yuki Moriya8
- Hayato Takihara7
- Jun Sakata7
- Kazuaki Takabe7
- Nobuaki Miura7
- Shuichi Kawashima7
- Yosuke Tajima6
- Yuki Hirose6
- Daisuke Shinmachi5
- Eric W. Deutsch5
- Hitoshi Kameyama5
全論文
- A metagenome-wide association study of gut microbiota in type 2 diabetes
著者: Junjie Qin, Yingrui Li, Zhiming Cai, Shenghui Li, Jianfeng Zhu, Fan Zhang, Suisha Liang, Wenwei Zhang, Yuanlin Guan, Dongqian Shen, Yangqing Peng, Dongya Zhang, Zhuye Jie, Wenxian Wu, Youwen Qin, Wenbin Xue, Junhua Li, Lingchuan Han, Dong-Hui Lu, Peixian Wu, Dai Yali, Xiaojuan Sun, Zesong Li, Ai-Fa TANG, Shilong Zhong, Xiaoping Li, Wei–Neng Chen, Ran Xu, Mingbang Wang, Qiang Feng, Meihua Gong, Jing Yu, Yanyan Zhang, Ming Zhang, Torben Hansen, Gastón Sánchez, Jeroen Raes, Gwen Falony, Shujiro Okuda, Mathieu Almeida, Emmanuelle Le-chatelier, Pierre Renault, Nicolas Pons, Jean-Michel Batto, Zhaoxi Zhang, Hua Chen, Ruifu Yang, Wei‐Mou Zheng, Songgang Li, Huanming Yang, Jian Wang, S. Dusko Ehrlich, Rasmus Nielsen, Oluf Pedersen, Karsten Kristiansen, Jun Wang, Jun Wang, Jun Wang - Nature 2012 被引用: 7,033
- KEGG for linking genomes to life and the environment
著者: Minoru Kanehisa, Michihiro Araki, Susumu Goto, Masahiro Hattori, Mika Hirakawa, Masumi Itoh, Toshiaki Katayama, Shuichi Kawashima, Shujiro Okuda, Toshiaki Tokimatsu, Yoshihiro Yamanishi - Nucleic Acids Research, Nucleic Acids Res. 2007 被引用: 7,054
- The ProteomeXchange consortium at 10 years: 2023 update
著者: Eric W. Deutsch, Nuno Bandeira, Yasset Pérez-Riverol, Vagisha Sharma, Jeremy Carver, Luis Mendoza, Deepti Jaiswal Kundu, Shengbo Wang, Chakradhar Bandla, Selvakumar Kamatchinathan, Suresh Hewapathirana, Benjamin S. Pullman, Julie Wertz, Zhi Sun, Shin Kawano, Shujiro Okuda, Yu Watanabe, Brendan MacLean, Michael J. MacCoss, Yunping Zhu, Yasushi Ishihama, Juan Antonio Vizcaíno - Nucleic Acids Research, Nucleic Acids Res. 2022 被引用: 865
- KAAS: an automatic genome annotation and pathway reconstruction server
著者: Yuki Moriya, Masumi Itoh, Shujiro Okuda, Akiyasu C. Yoshizawa, Minoru Kanehisa - Nucleic Acids Research, Nucleic Acids Res. 2007 被引用: 4,321
- Senolytic vaccination improves normal and pathological age-related phenotypes and increases lifespan in progeroid mice
著者: Masayoshi Suda, Ippei Shimizu, Goro Katsuumi, Yohko Yoshida, Yuka Hayashi, Ryutaro Ikegami, Naomi Matsumoto, Yutaka Yoshida, Ryuta Mikawa, Akihiro Katayama, Jun Wada, Masahide Seki, Yutaka Suzuki, Atsushi Iwama, Hironori Nakagami, Ayako Nagasawa, Ryuichi Morishita, Masataka Sugimoto, Shujiro Okuda, Masanori Tsuchida, Kazuyuki Ozaki, Mayumi Nakanishi‐Matsui, Tohru Minamino - Nature Aging 2021 被引用: 266
- jPOSTrepo: an international standard data repository for proteomes
著者: Shujiro Okuda, Yu Watanabe, Yuki Moriya, Shin Kawano, Tadashi Yamamoto, Masaki Matsumoto, Tomoyo Takami, Daiki Kobayashi, Norie Araki, Akiyasu C. Yoshizawa, Tsuyoshi Tabata, Naoyuki Sugiyama, Susumu Goto, Yasushi Ishihama - Nucleic Acids Research, Nucleic Acids Res. 2016 被引用: 746
- Species–function relationships shape ecological properties of the human gut microbiome
著者: Sara Vieira‐Silva, Gwen Falony, Youssef Darzi, Gipsi Lima‐Mendez, Roberto Garcia Yunta, Shujiro Okuda, Doris Vandeputte, Mireia Valles‐Colomer, Falk Hildebrand, Samuel Chaffron, Jeroen Raes - Nature Microbiology 2016 被引用: 519
- The ProteomeXchange consortium in 2020: enabling 'big data' approaches in proteomics
著者: Eric W. Deutsch, Nuno Bandeira, Vagisha Sharma, Yasset Pérez-Riverol, Jeremy Carver, Deepti Jaiswal Kundu, David García-Seisdedos, Andrew F. Jarnuczak, Suresh Hewapathirana, Benjamin S. Pullman, Julie Wertz, Zhi Sun, Shin Kawano, Shujiro Okuda, Yu Watanabe, Henning Hermjakob, Brendan MacLean, Michael J. MacCoss, Yunping Zhu, Yasushi Ishihama, Juan Antonio Vizcaíno - Nucleic Acids Research, Nucleic Acids Res. 2019 被引用: 778
- p62/SQSTM1-droplet serves as a platform for autophagosome formation and anti-oxidative stress response
著者: Shun Kageyama, Sigurður Guðmundsson, Yu‐shin Sou, Yoshinobu Ichimura, Naoki Tamura, Saiko Kazuno, Takashi Ueno, Yoshiki Miura, Daisuke Noshiro, Manabu Abe, Tsunehiro Mizushima, Nobuaki Miura, Shujiro Okuda, Hozumi Motohashi, Jin‐A Lee, Kenji Sakimura, Tomoyuki Ohe, Nobuo N. Noda, Satoshi Waguri, Eeva‐Liisa Eskelinen, Masaaki Komatsu - Nature Communications 2021 被引用: 288
- GlycoPOST realizes FAIR principles for glycomics mass spectrometry data
著者: Yu Watanabe, Kiyoko F. Aoki-Kinoshita, Yasushi Ishihama, Shujiro Okuda - Nucleic Acids Research, Nucleic Acids Res. 2020 被引用: 205
- The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition
著者: Eric W. Deutsch, Attila Csordas, Zhi Sun, Andrew F. Jarnuczak, Yasset Pérez-Riverol, Tobias Ternent, David S. Campbell, Manuel Bernal Llinares, Shujiro Okuda, Shin Kawano, Robert L. Moritz, Jeremy Carver, Mingxun Wang, Yasushi Ishihama, Nuno Bandeira, Henning Hermjakob, Juan Antonio Vizcaíno - Nucleic Acids Research, Nucleic Acids Res. 2016 被引用: 949
- p62/Sqstm1 promotes malignancy of HCV-positive hepatocellular carcinoma through Nrf2-dependent metabolic reprogramming
著者: Tetsuya Saito, Yoshinobu Ichimura, Keiko Taguchi, Takafumi Suzuki, Tsunehiro Mizushima, Kenji Takagi, Yuki Hirose, Masayuki Nagahashi, Tetsuro Iso, Toshiaki Fukutomi, Maki Ohishi, Keiko Endo, Takefumi Uemura, Yasumasa Nishito, Shujiro Okuda, Miki Obata, Tsuguka Kouno, Riyo Imamura, Yukio Tada, Rika Obata, Daisuke Yasuda, Kyôko Takahashi, Tsutomu Fujimura, Jingbo Pi, Myung‐Shik Lee, Takashi Ueno, Tomoyuki Ohe, Tadahiko Mashino, Toshifumi Wakai, Hirotatsu Kojima, Takayoshi Okabe, Tetsuo Nagano, Hozumi Motohashi, Satoshi Waguri, Tomoyoshi Soga, Masayuki Yamamoto, Keiji Tanaka, Masaaki Komatsu - Nature Communications 2016 被引用: 372
- Autophagy regulates lipid metabolism through selective turnover of NCoR1
著者: Tetsuya Saito, Akiko Kuma, Yuki Sugiura, Yoshinobu Ichimura, Miki Obata, Hiroshi Kitamura, Shujiro Okuda, Hyeon‐Cheol Lee, Kazutaka Ikeda, Yumi Kanegae, Izumu Saito, Johan Auwerx, Hozumi Motohashi, Makoto Suematsu, Tomoyoshi Soga, Takehiko Yokomizo, Satoshi Waguri, Noboru Mizushima, Masaaki Komatsu - Nature Communications 2019 被引用: 195
- The GlyCosmos Portal: a unified and comprehensive web resource for the glycosciences
著者: Issaku Yamada, Masaaki Shiota, Daisuke Shinmachi, Tamiko Ono, Shinichiro Tsuchiya, Masae Hosoda, Akihiro Fujita, Nobuyuki P. Aoki, Yu Watanabe, Noriaki Fujita, Kiyohiko Angata, Hiroyuki Kaji, Hisashi Narimatsu, Shujiro Okuda, Kiyoko F. Aoki‐Kinoshita - Nature Methods 2020 被引用: 131
- Next generation sequencing‐based gene panel tests for the management of solid tumors
著者: Masayuki Nagahashi, Yoshifumi Shimada, Hiroshi Ichikawa, Hitoshi Kameyama, Kazuaki Takabe, Shujiro Okuda, Toshifumi Wakai - Cancer Science 2018 被引用: 193
- Sharing of human milk oligosaccharides degradants within bifidobacterial communities in faecal cultures supplemented with Bifidobacterium bifidum
著者: Aina Gotoh, Toshihiko Katoh, Mikiyasu Sakanaka, Yiwei Ling, Chihaya Yamada, Sadaki Asakuma, Tadasu Urashima, Yusuke Tomabechi, Ayako Katayama-Ikegami, Shin Kurihara, Kenji Yamamoto, Gaku Harata, Fang He, Junko Hirose, Motomitsu Kitaoka, Shujiro Okuda, Takane Katayama - Scientific Reports 2018 被引用: 169
- Obesity-Related Gut Microbiota Aggravates Alveolar Bone Destruction in Experimental Periodontitis through Elevation of Uric Acid
著者: Keisuke Sato, Kyoko Yamazaki, Kyoko Yamazaki, Tamotsu Kato, Yumiko Nakanishi, Takahiro Tsuzuno, Mai Yokoji‐Takeuchi, Miki Yamada‐Hara, Nobuaki Miura, Shujiro Okuda, Hiroshi Ohno, Kazuhisa Yamazaki, Kazuhisa Yamazaki - mBio 2021 被引用: 75
- Three-dimensional understanding of the morphological complexity of the human uterine endometrium
著者: Manako Yamaguchi, Kosuke Yoshihara, Kazuaki Suda, Hirofumi Nakaoka, Nozomi Yachida, Haruka Ueda, Kentaro Sugino, Yutaro Mori, Kaoru Yamawaki, Ryo Tamura, Tatsuya Ishiguro, Teiichi Motoyama, Yu Watanabe, Shujiro Okuda, Kazuki Tainaka, Takayuki Enomoto - iScience 2021 被引用: 121
- Glycoprotein nonmetastatic melanoma protein B regulates lysosomal integrity and lifespan of senescent cells
著者: Masayoshi Suda, Ippei Shimizu, Goro Katsuumi, Chieh Lun Hsiao, Yohko Yoshida, Naomi Matsumoto, Yutaka Yoshida, Akihiro Katayama, Jun Wada, Masahide Seki, Yutaka Suzuki, Shujiro Okuda, Kazuyuki Ozaki, Mayumi Nakanishi‐Matsui, Tohru Minamino - Scientific Reports 2022 被引用: 63
- Histopathological characteristics and artificial intelligence for predicting tumor mutational burden-high colorectal cancer
著者: Yoshifumi Shimada, Shujiro Okuda, Yu Watanabe, Yosuke Tajima, Masayuki Nagahashi, Hiroshi Ichikawa, Masato Nakano, Jun Sakata, Yasumasa Takii, Takashi Kawasaki, Kei-ichi Homma, Tomohiro Kamori, Eiji Oki, Yiwei Ling, Shiho Takeuchi, Toshifumi Wakai - Journal of Gastroenterology 2021 被引用: 62
- Molecular Insight into Evolution of Symbiosis between Breast-Fed Infants and a Member of the Human Gut Microbiome Bifidobacterium longum
著者: Chihaya Yamada, Aina Gotoh, Mikiyasu Sakanaka, Mitchell Hattie, Keith A. Stubbs, Ayako Katayama-Ikegami, Junko Hirose, Shin Kurihara, T. Arakawa, Motomitsu Kitaoka, Shujiro Okuda, Takane Katayama, Shinya Fushinobu - Cell chemical biology 2017 被引用: 129
- Brown adipose tissue dysfunction promotes heart failure via a trimethylamine N-oxide-dependent mechanism
著者: Yohko Yoshida, Ippei Shimizu, Atsuhiro Shimada, Keita Nakahara, Sachiko Yanagisawa, Minoru Kubo, Shinji Fukuda, Chiharu Ishii, Hiromitsu Yamamoto, Takamasa Ishikawa, Kuniyuki Kano, Junken Aoki, Goro Katsuumi, Masayoshi Suda, Kazuyuki Ozaki, Yutaka Yoshida, Shujiro Okuda, Shigeo Ohta, Shiki Okamoto, Yasuhiko Minokoshi, Kanako Oda, Toshikuni Sasaoka, Manabu Abe, Kenji Sakimura, Yoshiaki Kubota, Norihiko Yoshimura, Shingo Kajimura, María A. Zuriaga, Kenneth Walsh, Tomoyoshi Soga, Tohru Minamino - Scientific Reports 2022 被引用: 38
- Elevated bile acid metabolism and microbiome are associated with suppressed cell proliferation and better survival in breast cancer.
著者: Rongrong Wu, Irene Yu, Yoshihisa Tokumaru, Mariko Asaoka, Masanori Oshi, Li Yan, Shujiro Okuda, Takashi Ishikawa, Kazuaki Takabe - 2022 被引用: 31
- Profiling of host genetic alterations and intra-tumor microbiomes in colorectal cancer
著者: Shujiro Okuda, Yoshifumi Shimada, Yosuke Tajima, Kizuki Yuza, Yuki Hirose, Hiroshi Ichikawa, Masayuki Nagahashi, Jun Sakata, Yiwei Ling, Nobuaki Miura, Mika Sugai, Yu Watanabe, Shiho Takeuchi, Toshifumi Wakai - Computational and Structural Biotechnology Journal 2021 被引用: 40
