Burkhard Rost
1983–2025 年に発表
- 229
- 論文数
- 43,406
- 被引用数
- 102
- h 指数
- 199
- i10 指数
被引用数
引用元
国・地域
機関
分野
- Biochemistry, Genetics and Molecular Biology68.8%
- Medicine11.2%
- Computer Science6.8%
- Agricultural and Biological Sciences3%
- Immunology and Microbiology2.6%
- Materials Science1.6%
- その他6%
トピック
- Protein Structure and Dynamics10.6%
- Machine Learning in Bioinformatics9.9%
- RNA and protein synthesis mechanisms6.2%
- Genomics and Phylogenetic Studies4.8%
- Bioinformatics and Genomic Networks4.2%
- Enzyme Structure and Function3.9%
- その他60.4%
共著者
- Michael Heinzinger34
- Christian Dallago18
- Chris Sander17
- Jinfeng Liu17
- Marco Punta15
- Maria Littmann15
- Rajesh Nair14
- Yana Bromberg14
- Michael Bernhofer13
- Martin Steinegger12
- Tatyana Goldberg12
- Avner Schlessinger11
- Guy Yachdav11
- Alfonso Valencia9
- Reinhard Schneider9
- Tobias Olenyi9
- Yanay Ofran9
- Ahmed Elnaggar8
- Céline Marquet7
- Konstantin Weißenow7
- Maximilian Hecht7
- Tobias Hamp7
- Brian Kloss6
- Edda Kloppmann6
全論文
- ProtTrans: Toward Understanding the Language of Life Through Self-Supervised Learning
著者: Ahmed Elnaggar, Michael Heinzinger, Christian Dallago, Ghalia Rehawi, Yu Wang, Llion Jones, Tom Gibbs, Tamas Feher, Christoph Angerer, Martin Steinegger, Debsindhu Bhowmik, Burkhard Rost - IEEE Transactions on Pattern Analysis and Machine Intelligence, IEEE Trans. Pattern Anal. Mach. Intell. 2021 被引用: 2,269
- Modeling aspects of the language of life through transfer-learning protein sequences
著者: Michael Heinzinger, Ahmed Elnaggar, Yu Wang, Christian Dallago, Dmitrii Nechaev, Florian Matthes, Burkhard Rost - BMC Bioinformatics, BMC Bioinform. 2019 被引用: 636
- A large-scale evaluation of computational protein function prediction
著者: Predrag Radivojac, Wyatt T. Clark, Tal Oron, Alexandra M. Schnoes, Tobias Wittkop, Artem Sokolov, Kiley Graim, Christopher S. Funk, Karin Verspoor, Asa Ben‐Hur, Gaurav Pandey, Jeffrey M. Yunes, Ameet Talwalkar, Susanna Repo, Michael L Souza, Damiano Piovesan, Rita Casadio, Zheng Wang, Jianlin Cheng, Hai Fang, Julian Gough, Patrik Koskinen, Petri Törönen, Jussi Nokso-Koivisto, Liisa Holm, Domenico Cozzetto, Daniel Buchan, Kevin Bryson, David T. Jones, Bhakti Limaye, Harshal Inamdar, Avik Datta, Sunitha K Manjari, Rajendra Joshi, Meghana Chitale, Daisuke Kihara, Andreas Martin Lisewski, Serkan Erdin, Eric Venner, Olivier Lichtarge, Robert Rentzsch, Haixuan Yang, Alfonso E. Romero, Prajwal Bhat, Alberto Paccanaro, Tobias Hamp, Rebecca Kaßner, Stefan Seemayer, Esmeralda Vicedo, Christian Schaefer, Dominik Achten, Florian Auer, Ariane C. Boehm, Tatjana Braun, Maximilian Hecht, B. Mark Heron, Peter Hönigschmid, Thomas A. Hopf, Stefanie Kaufmann, Michael Kiening, Denis Krompaß, Cedric Landerer, Yannick Mahlich, Manfred Roos, Jari Björne, Tapio Salakoski, Andrew Wong, Hagit Shatkay, Fanny Gatzmann, I. Sommer, Mark N. Wass, Michael J.E. Sternberg, Nives Škunca, Fran Supek, Matko Bošnjak, Panče Panov, Sašo Džeroski, Tomislav Šmuc, Yiannis Kourmpetis, Aalt D. J. van Dijk, Cajo J. F. ter Braak, Yuanpeng Zhou, Qingtian Gong, Xinran Dong, Weidong Tian, Marco Falda, Paolo Fontana, Enrico Lavezzo, Barbara Di Camillo, Stefano Toppo, Liang Lan, Nemanja Djuric, Yuhong Guo, Slobodan Vučetić, Amos Bairoch, Michal Linial, Patricia C. Babbitt, Steven E. Brenner, Christine Orengo, Burkhard Rost ほか 2 名 - Nature Methods 2013 被引用: 1,095
- Ankh: Optimized Protein Language Model Unlocks General-Purpose Modelling
著者: Ahmed Elnaggar, Hazem Essam, Wafaa Salah-Eldin, Walid Moustafa, Mohamed Elkerdawy, Charlotte Rochereau, Burkhard Rost - arXiv (Cornell University), CoRR 2023 被引用: 154
- A draft network of ligand–receptor-mediated multicellular signalling in human
著者: Jordan A. Ramilowski, Tatyana Goldberg, Jayson Harshbarger, Edda Kloppmann, Marina Lizio, Venkata Satagopam, Masayoshi Itoh, Hideya Kawaji, Piero Carninci, Burkhard Rost, Alistair R. R. Forrest - Nature Communications 2015 被引用: 990
- Twilight zone of protein sequence alignments
著者: Burkhard Rost - Protein Engineering Design and Selection 1999 被引用: 1,865
- ProtTrans: Towards Cracking the Language of Life’s Code Through Self-Supervised Learning
著者: Ahmed Elnaggar, Michael Heinzinger, Christian Dallago, Ghalia Rehawi, Yu Wang, Llion Jones, Tom Gibbs, Tamas Feher, Christoph Angerer, Martin Steinegger, Debsindhu Bhowmik, Burkhard Rost - 2020 被引用: 365
- Embeddings from protein language models predict conservation and variant effects
著者: Céline Marquet, Michael Heinzinger, Tobias Olenyi, Christian Dallago, Kyra Erckert, Michael Bernhofer, Dmitrii Nechaev, Burkhard Rost - Human Genetics 2021 被引用: 173
- Protein language-model embeddings for fast, accurate, and alignment-free protein structure prediction
著者: Konstantin Weißenow, Michael Heinzinger, Burkhard Rost - Structure 2022 被引用: 138
- A Mutation in VPS35, Encoding a Subunit of the Retromer Complex, Causes Late-Onset Parkinson Disease
著者: Alexander Zimprich, Anna Benet‐Pagès, Walter Struhal, Elisabeth Graf, Sebastian Eck, Marc N. Offman, Dietrich Haubenberger, Sabine Spielberger, Eva C. Schulte, Peter Lichtner, Shaila C. Rössle, Norman Klopp, Elisabeth Wolf, Klaus Seppi, Walter Pirker, Stefan Presslauer, Brit Mollenhauer, Regina Katzenschlager, Thomas Foki, Christoph Hotzy, Eva M. Reinthaler, Ashot S. Harutyunyan, Róbert Královics, Annette Peters, Fritz Zimprich, Thomas Brücke, Werner Poewe, Eduard Auff, Claudia Trenkwalder, Burkhard Rost, Gerhard Ransmayr, Juliane Winkelmann, Thomas Meitinger, Tim M. Strom - The American Journal of Human Genetics 2011 被引用: 902
- Bilingual Language Model for Protein Sequence and Structure
著者: Michael Heinzinger, Konstantin Weißenow, Joaquín Gómez Sánchez, Adrian Henkel, Milot Mirdita, Martin Steinegger, Burkhard Rost - NAR Genomics and Bioinformatics 2023 被引用: 207
- Learned Embeddings from Deep Learning to Visualize and Predict Protein Sets
著者: Christian Dallago, Konstantin Schütze, Michael Heinzinger, Tobias Olenyi, Maria Littmann, Amy X. Lu, Kevin Yang, Seonwoo Min, Sungroh Yoon, James T. Morton, Burkhard Rost - Current Protocols 2021 被引用: 123
- Better prediction of functional effects for sequence variants
著者: Maximilian Hecht, Yana Bromberg, Burkhard Rost - BMC Genomics 2015 被引用: 664
- ProNA2020 predicts protein–DNA, protein–RNA, and protein–protein binding proteins and residues from sequence
著者: Jiajun Qiu, Michael Bernhofer, Michael Heinzinger, Sofie Kemper, Tomás Norambuena, Francisco Melo, Burkhard Rost - Journal of Molecular Biology 2020 被引用: 143
- Novel machine learning approaches revolutionize protein knowledge
著者: Nicola Bordin, Christian Dallago, Michael Heinzinger, Stephanie Kim, Maria Littmann, Clemens Rauer, Martin Steinegger, Burkhard Rost, Christine Orengo - Trends in Biochemical Sciences 2022 被引用: 74
- SNAP: predict effect of non-synonymous polymorphisms on function
著者: Yana Bromberg, Burkhard Rost - Nucleic Acids Research 2007 被引用: 876
- ProtTrans: Towards Cracking the Language of Life's Code Through Self-Supervised Deep Learning and High Performance Computing
著者: Ahmed Elnaggar, Michael Heinzinger, Christian Dallago, Ghalia Rehawi, Yu Wang, Llion Jones, Tom Gibbs, Tamas Feher, Christoph Angerer, Martin Steinegger, Debsindhu Bhowmik, Burkhard Rost - arXiv (Cornell University), CoRR 2020 被引用: 211
- Conservation and prediction of solvent accessibility in protein families
著者: Burkhard Rost, Chris Sander - Proteins Structure Function and Bioinformatics 1994 被引用: 677
- ProteomicsDB: toward a FAIR open-source resource for life-science research
著者: Ludwig Lautenbacher, Patroklos Samaras, Julian Müller, Andreas Grafberger, Marwin Shraideh, Johannes Rank, Simon T. Fuchs, Tobias K. Schmidt, Matthew The, Christian Dallago, Holger Wittges, Burkhard Rost, Helmut Krcmar, Bernhard Küster, Mathias Wilhelm - Nucleic Acids Research, Nucleic Acids Res. 2021 被引用: 84
- CodeTrans: Towards Cracking the Language of Silicone's Code Through Self-Supervised Deep Learning and High Performance Computing
著者: Ahmed Elnaggar, Wei Ding, Llion Jones, Tom Gibbs, Tamas Feher, Christoph Angerer, Silvia Severini, Florian Matthes, Burkhard Rost - arXiv (Cornell University), CoRR 2021 被引用: 48
- What’s in a name? Why these proteins are intrinsically disordered
著者: A. Keith Dunker, M. Madan Babu, Elisar Barbar, Martin Blackledge, Sarah E. Bondos, Zsuzsanna Dosztányi, H. Jane Dyson, Julie D. Forman‐Kay, Mónika Fuxreiter, Jörg Gsponer, Kyou‐Hoon Han, David T. Jones, Sonia Longhi, Steven J. Metallo, Ken Nishikawa, Ruth Nussinov, Zoran Obradović, Rohit V. Pappu, Burkhard Rost, Philipp Selenko, Vinod Subramaniam, Joel L. Sussman, Péter Tompa, Vladimir N. Uversky - Intrinsically Disordered Proteins 2013 被引用: 306
- SETH predicts nuances of residue disorder from protein embeddings
著者: Dagmar Ilzhöfer, Michael Heinzinger, Burkhard Rost - Frontiers in Bioinformatics, Frontiers Bioinform. 2022 被引用: 54
- CAID prediction portal: a comprehensive service for predicting intrinsic disorder and binding regions in proteins
著者: Alessio Del Conte, Adel Bouhraoua, Mahta Mehdiabadi, Damiano Clementel, Alexander Miguel Monzón, CAID predictors, Alex S. Holehouse, Daniel Griffith, Ryan J. Emenecker, Ashwini Patil, Ronesh Sharma, Tatsuhiko Tsunoda, Alok Sharma, Yi Jun Tang, Bin Liu, Claudio Mirabello, Björn Wallner, Burkhard Rost, Dagmar Ilzhöfer, Maria Littmann, Michael Heinzinger, Lea I M Krautheimer, Michael Bernhofer, Liam J. McGuffin, Isabelle Callebaut, Tristan Bitard Feildel, Jian Liu, Jianlin Cheng, Zhiye Guo, Jinbo Xu, Sheng Wang, Nawar Malhis, Jörg Gsponer, Chol-Song Kim, Kun‐Sop Han, Myong-Chol Ma, Lukasz Kurgan, Sina Ghadermarzi, Akila Katuwawala, Bi Zhao, Zhenling Peng, Zhonghua Wu, Gang Hu, Kui Wang, Md Tamjidul Hoque, Md Wasi Ul Kabir, Michele Vendruscolo, Pietro Sormanni, Min Li, Fuhao Zhang, Pengzhen Jia, Yida Wang, Michail Yu. Lobanov, Oxana V. Galzitskaya, Wim Vranken, Adrián Díaz, Thomas Litfin, Yaoqi Zhou, Jack Hanson, Kuldip K. Paliwal, Zsuzsanna Dosztányi, Gábor Erdős, Silvio C. E. Tosatto, Damiano Piovesan - Nucleic Acids Research, Nucleic Acids Res. 2023 被引用: 59
- Unexpected features of the dark proteome
著者: Nelson Perdigão, Julian Heinrich, Christian Stolte, Kenneth S. Sabir, Michael Buckley, Bruce Tabor, Beth Signal, Brian Gloss, Christopher Hammang, Burkhard Rost, Andrea Schafferhans, Séan O’Donoghue - National Academy of Sciences, Proceedings of the National Academy of Sciences 2015 被引用: 216
