Peter F. Stadler
1010–2026 年に発表
- 別表記
- Peter F Stadler
- 552
- 論文数
- 59,544
- 被引用数
- 109
- h 指数
- 343
- i10 指数
被引用数
引用元
国・地域
機関
分野
- Biochemistry, Genetics and Molecular Biology66.3%
- Medicine8.1%
- Computer Science7%
- Agricultural and Biological Sciences6.4%
- Environmental Science2.9%
- Immunology and Microbiology1.9%
- その他7.4%
トピック
- RNA and protein synthesis mechanisms8.6%
- RNA modifications and cancer7.3%
- Genomics and Phylogenetic Studies6%
- RNA Research and Splicing5.2%
- Cancer-related molecular mechanisms research5.1%
- MicroRNA in disease regulation3.3%
- その他64.5%
共著者
- Ivo L. Hofacker88
- Marc Hellmuth67
- Christoph Flamm56
- Sonja J. Prohaska37
- Daniel Merkle29
- Steve Hoffmann25
- Christian Höner zu Siederdissen20
- Jana Hertel20
- Stephan Wolf20
- David Schaller19
- Jörg Fallmann19
- Jakob L. Andersen18
- Rolf Backofen18
- Sebastian Will18
- Hakim Tafer17
- Manuela Geiß17
- Nicolas Wieseke16
- Maribel Hernandez-Rosales15
- Jörg Hackermüller14
- Ronny Lorenz14
- Axel Mosig13
- Christian Otto13
- Peter Schuster13
- Stephan H. Bernhart13
全論文
- ViennaRNA Package 2.0
著者: Ronny Lorenz, Stephan H. Bernhart, Christian Höner zu Siederdissen, Hakim Tafer, Christoph Flamm, Peter F. Stadler, Ivo L. Hofacker - Algorithms for Molecular Biology, Algorithms Mol. Biol. 2011 被引用: 5,395
- MITOS: Improved de novo metazoan mitochondrial genome annotation
著者: Matthias Bernt, Alexander Donath, Frank Jühling, Fabian Externbrink, Catherine Florentz, Guido Fritzsch, Joern Pütz, Martin Middendorf, Peter F. Stadler - Molecular Phylogenetics and Evolution 2012 被引用: 5,485
- RNA Maps Reveal New RNA Classes and a Possible Function for Pervasive Transcription
著者: Philipp Kapranov, Jill Cheng, Sujit Dike, David A. Nix, Radharani Duttagupta, Aarron Willingham, Peter F. Stadler, Jana Hertel, Jörg Hackermüller, Ivo L. Hofacker, Ian Bell, Evelyn J. Cheung, Jörg Drenkow, Erica Dumais, Sandeep Patel, Gregg Helt, Madhavan Ganesh, Srinka Ghosh, Antonio Piccolboni, Victor Sementchenko, Hari Tammana, T Gingeras - Science 2007 被引用: 2,593
- metilene: fast and sensitive calling of differentially methylated regions from bisulfite sequencing data
著者: Frank Jühling, Helene Kretzmer, Stephan Wolf, Christian Otto, Peter F. Stadler, Steve Hoffmann - Genome Research 2015 被引用: 561
- Fast folding and comparison of RNA secondary structures
著者: Ivo L. Hofacker, Walter Fontana, Peter F. Stadler, L. Sebastian Bonhoeffer, Manfred Tacker, Peter Schuster - Monatshefte für Chemie - Chemical Monthly 1994 被引用: 2,343
- Improved annotation of protein-coding genes boundaries in metazoan mitochondrial genomes
著者: Alexander Donath, Frank Jühling, Marwa Al-Arab, Stephan Wolf, Franziska Reinhardt, Peter F. Stadler, Martin Middendorf, Matthias Bernt - Nucleic Acids Research 2019 被引用: 810
- Proteinortho: Detection of (Co-)Orthologs in Large-Scale Analysis
著者: Marcus Lechner, Sven Findeiß, Lydia Steiner, Manja Marz, Peter F. Stadler, Sonja J. Prohaska - BMC Bioinformatics, BMC Bioinform. 2011 被引用: 1,285
- RNAcentral: a hub of information for non-coding RNA sequences
著者: Blake A Sweeney, Anton I Petrov, Boris Burkov, Robert D Finn, Alex Bateman, Maciej Szymanski, Wojciech M Karlowski, Jan Gorodkin, Stefan E Seemann, Jamie J Cannone, Robin R Gutell, Petra Fey, Siddhartha Basu, Simon Kay, Guy Cochrane, Kostantinos Billis, David Emmert, Steven J Marygold, Rachael P Huntley, Ruth C Lovering, Adam Frankish, Patricia P Chan, Todd M Lowe, Elspeth Bruford, Ruth Seal, Jo Vandesompele, Pieter-Jan Volders, Maria Paraskevopoulou, Lina Ma, Zhang Zhang, Sam Griffiths-Jones, Janusz M Bujnicki, Pietro Boccaletto, Judith A Blake, Carol J Bult, Runsheng Chen, Yi Zhao, Valerie Wood, Kim Rutherford, Elena Rivas, James Cole, Stanley J F Laulederkind, Mary Shimoyama, Marc E Gillespie, Marija Orlic-Milacic, Ioanna Kalvari, Eric Nawrocki, Stacia R Engel, J Michael Cherry, SILVA Team, Tanya Z Berardini, Artemis Hatzigeorgiou, Dimitra Karagkouni, Kevin Howe, Paul Davis, Marcel Dinger, Shunmin He, Maki Yoshihama, Naoya Kenmochi, Peter F Stadler, Kelly P Williams - Nucleic Acids Research 2018 被引用: 333
- Large-scale benchmarking of circRNA detection tools reveals large differences in sensitivity but not in precision
著者: Marieke Vromman, Jasper Anckaert, Stefania Bortoluzzi, Alessia Buratin, Chia-Ying Chen, Qinjie Chu, Trees‐Juen Chuang, Roozbeh Dehghannasiri, Christoph Dieterich, Xin Dong, Paul Flicek, Enrico Gaffo, Wanjun Gu, Chunjiang He, Steve Hoffmann, Osagie Izuogu, Michael S. Jackson, Tobias Jakobi, Eric C. Lai, Justine Nuytens, Julia Salzman, Mauro Santibanez‐Koref, Peter F. Stadler, Olivier Thas, Eveline Vanden Eynde, Kimberly Verniers, Guoxia Wen, Jakub Orzechowski Westholm, Li Yang, Chuyu Ye, Nurten Yigit, Guo-Hua Yuan, Jinyang Zhang, Fangqing Zhao, Jo Vandesompele, Pieter‐Jan Volders - Nature Methods 2023 被引用: 102
- tRNAdb 2009: compilation of tRNA sequences and tRNA genes
著者: Frank Jühling, Mario Mörl, Roland K. Hartmann, Mathias Sprinzl, Peter F. Stadler, Joern Pütz - Nucleic Acids Research, Nucleic Acids Res. 2008 被引用: 921
- Dual RNA-seq unveils noncoding RNA functions in host–pathogen interactions
著者: Alexander J. Westermann, Konrad U. Förstner, Fabian Amman, Lars Barquist, Yanjie Chao, Leon N. Schulte, Lydia Müller, Richard Reinhardt, Peter F. Stadler, Jörg Vogel - Nature 2016 被引用: 513
- The primary transcriptome of the major human pathogen Helicobacter pylori
著者: Cynthia M. Sharma, Steve Hoffmann, Fabien Darfeuille, Jérémy Reignier, Sven Findeiß, Alexandra Sittka, Sandrine Chabas, Kristin Reiche, Jörg Hackermüller, Richard Reinhardt, Peter F. Stadler, Jörg Vogel - Nature, Nat. 2010 被引用: 1,181
- DREAM and RB cooperate to induce gene repression and cell-cycle arrest in response to p53 activation
著者: Sigrid Uxa, Stephan Wolf, Christina FS Mages, Martin Fischer, R. Köhler, Steve Hoffmann, Peter F. Stadler, Kurt Engeland, Gerd A. Müller - Nucleic Acids Research 2019 被引用: 112
- Human pathways in animal models: possibilities and limitations
著者: Nadezhda T. Doncheva, Oana Palasca, Reza Yarani, Thomas Litman, Christian Anthon, Martien A. M. Groenen, Peter F. Stadler, Flemming Pociot, Lars Juhl Jensen, Jan Gorodkin - Nucleic Acids Research 2021 被引用: 91
- RNAalifold: improved consensus structure prediction for RNA alignments
著者: Stephan H. Bernhart, Ivo L. Hofacker, Sebastian Will, Andreas R. Gruber, Peter F. Stadler - BMC Bioinformatics, BMC Bioinform. 2008 被引用: 612
- LocARNA-P: Accurate boundary prediction and improved detection of structural RNAs
著者: Sebastian Will, Tejal Joshi, Ivo L. Hofacker, Peter F. Stadler, Rolf Backofen - RNA 2012 被引用: 413
- RNAcentral: a comprehensive database of non-coding RNA sequences
著者: Anton I. Petrov, Simon Kay, Ioanna Kalvari, Kevin Howe, Kristian Gray, Elspeth A. Bruford, Paul Kersey, Guy Cochrane, ROBERT FINN, Alex Bateman, Ana Kozomara, Sam Griffiths‐Jones, Adam Frankish, Christian Zwieb, Britney Y. Lau, Kelly P. Williams, Patricia P. Chan, Todd M. Lowe, Jamie J. Cannone, Robin R. Gutell, Magdalena A. Machnicka, Janusz M. Bujnicki, Maki Yoshihama, Naoya Kenmochi, Benli Chai, James R. Cole, M. Szymański, Wojciech M. Karłowski, Valerie Wood, Eva Huala, Tanya Berardini, Yi Zhao, Runsheng Chen, Weimin Zhu, Maria D. Paraskevopoulou, Ioannis S. Vlachos, Artemis G. Hatzigeorgiou, Lina Ma, Zhang Zhang, Joern Puetz, Peter F. Stadler, Daniel McDonald, Siddhartha Basu, Petra Fey, Stacia R. Engel, J. Michael Cherry, Pieter‐Jan Volders, Pieter Mestdagh, Jacek Wower, Michael B. Clark, Xiu Cheng Quek, Marcel E. Dinger - Nucleic Acids Research, Nucleic Acids Res. 2016 被引用: 274
- The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons
著者: Ingo Braasch, Andrew R. Gehrke, Jeramiah J. Smith, Kazuhiko Kawasaki, Tereza Manousaki, Jérémy Pasquier, Angel Amores, Thomas Desvignes, Peter Batzel, Julian Catchen, Aaron M. Berlin, Michael S. Campbell, Daniel Barrell, Kyle J. Martin, John F. Mulley, Vydianathan Ravi, Alison Lee, Tetsuya Nakamura, Domitille Chalopin, Shaohua Fan, Dustin J. Wcisel, Cristian Cañestro, Jason Sydes, Felix E.G. Beaudry, Yi Sun, Jana Hertel, Michael J. Beam, Mario Fasold, Mikio Ishiyama, Jeremy Johnson, Steffi Kehr, Marcia Lara, John Letaw, Gary W. Litman, Ronda T. Litman, Masato Mikami, Tatsuya Ota, Nil Ratan Saha, Louise Williams, Peter F. Stadler, Han Wang, John S. Taylor, Quenton Fontenot, Allyse Ferrara, Stephen M. J. Searle, Bronwen Aken, Mark Yandell, Igor Schneider, Jeffrey A. Yoder, Jean‐Nicolas Volff, Axel Meyer, Chris T. Amemiya, Byrappa Venkatesh, Peter W H Holland, Yann Guiguen, Julien Bobe, Neil H. Shubin, Federica Di Palma, Jessica Alföldi, Kerstin Lindblad‐Toh, John H. Postlethwait - Nature Genetics 2016 被引用: 671
- A guide to naming human non‐coding RNA genes
著者: Ruth L. Seal, Ling‐Ling Chen, Sam Griffiths‐Jones, Todd M. Lowe, Michael B. Mathews, Dawn O’Reilly, Andrew J. Pierce, Peter F. Stadler, Igor Ulitsky, Sandra L. Wolin, Elspeth A. Bruford - The EMBO Journal 2020 被引用: 125
- The genome of the recently domesticated crop plant sugar beet (Beta vulgaris) Open
著者: Juliane C. Dohm, André E. Minoche, Daniela Holtgräwe, Salvador Capella-Gutiérrez, Falk Zakrzewski, Hakim Tafer, Oliver Rupp, Thomas Rosleff Sörensen, Ralf Stracke, Richard Reinhardt, Alexander Goesmann, Thomas Kraft, Britta Schulz, Peter F. Stadler, Thomas Schmidt, Toni Gabaldón, Hans Lehrach, Bernd Weisshaar, Heinz Himmelbauer - Nature, Nat. 2013 被引用: 718
- Prognostic value of tumor oxygenation in 397 head and neck tumors after primary radiation therapy. An international multi-center study
著者: Marianne Nordsmark, Søren M. Bentzen, Volker Rudat, David M. Brizel, Éric Lartigau, Peter F. Stadler, Axel Becker, Markus Adam, M. Molls, Juergen Dunst, David J. Terris, Jens Overgaard - Radiotherapy and Oncology 2005 被引用: 941
- Sound–meaning association biases evidenced across thousands of languages
著者: Damián E. Blasí, Søren Wichmann, Harald Hammarström, Peter F. Stadler, Morten H. Christiansen - National Academy of Sciences, Proceedings of the National Academy of Sciences 2016 被引用: 641
- Chemical Transformation Motifs - Modelling Pathways as Integer Hyperflows
著者: Jakob L. Andersen, Christoph Flamm, Daniel Merkle, Peter F. Stadler - IEEE/ACM Transactions on Computational Biology and Bioinformatics, IEEE ACM Trans. Comput. Biol. Bioinform. 2017 被引用: 64
- Fast Mapping of Short Sequences with Mismatches, Insertions and Deletions Using Index Structures
著者: Steve Hoffmann, Christian Otto, Stefan Kurtz, Cynthia M. Sharma, Philipp Khaitovich, Jörg Vogel, Peter F. Stadler, Jörg Hackermüller - PLoS Computational Biology, PLoS Comput. Biol. 2009 被引用: 579
