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Vineet Bafna

1990–2025 年に発表

178
論文数
23,646
被引用数
77
h 指数
157
i10 指数

被引用数

Vineet Bafna の年別被引用数1972 年: 被引用 1 件1993 年: 被引用 2 件1994 年: 被引用 4 件1995 年: 被引用 18 件1996 年: 被引用 18 件1997 年: 被引用 19 件1998 年: 被引用 46 件1999 年: 被引用 59 件2000 年: 被引用 66 件2001 年: 被引用 65 件2002 年: 被引用 93 件2003 年: 被引用 132 件2004 年: 被引用 171 件2005 年: 被引用 217 件2006 年: 被引用 205 件2007 年: 被引用 279 件2008 年: 被引用 379 件2009 年: 被引用 371 件2010 年: 被引用 428 件2011 年: 被引用 423 件2012 年: 被引用 374 件2013 年: 被引用 388 件2014 年: 被引用 388 件2015 年: 被引用 366 件2016 年: 被引用 297 件2017 年: 被引用 290 件2018 年: 被引用 288 件2019 年: 被引用 498 件2020 年: 被引用 592 件2021 年: 被引用 642 件2022 年: 被引用 667 件2023 年: 被引用 562 件2024 年: 被引用 883 件2025 年: 被引用 535 件2026 年: 被引用 49 件2027 年: 被引用 1 件1973〜1992 年は被引用が無いため表示していません

引用元

国・地域

この著者を引用した国・地域の世界地図アメリカ合衆国: 引用元論文 3,737 件、この内訳の 32.4%中国: 引用元論文 1,006 件、この内訳の 8.7%ドイツ: 引用元論文 747 件、この内訳の 6.5%イギリス: 引用元論文 655 件、この内訳の 5.7%カナダ: 引用元論文 473 件、この内訳の 4.1%フランス: 引用元論文 415 件、この内訳の 3.6%イタリア: 引用元論文 366 件、この内訳の 3.2%オーストラリア: 引用元論文 278 件、この内訳の 2.4%イスラエル: 引用元論文 265 件、この内訳の 2.3%オランダ: 引用元論文 257 件、この内訳の 2.2%スイス: 引用元論文 226 件、この内訳の 2%スペイン: 引用元論文 226 件、この内訳の 2%
0%32.4%その他 24.9%

機関

分野

  • Biochemistry, Genetics and Molecular Biology58.4%
  • Computer Science10.8%
  • Medicine9.7%
  • Chemistry8.2%
  • Immunology and Microbiology3.6%
  • Agricultural and Biological Sciences2.6%
  • その他6.7%

トピック

  • Genomics and Phylogenetic Studies7.5%
  • Advanced Proteomics Techniques and Applications3.2%
  • Cancer Genomics and Diagnostics3.2%
  • Chromosomal and Genetic Variations2.7%
  • Genome Rearrangement Algorithms2.7%
  • Algorithms and Data Compression2.5%
  • その他78.2%

共著者

全論文

検索で開く
  1. Extrachromosomal DNA is associated with oncogene amplification and poor outcome across multiple cancers

    著者: Hoon Kim, Nam Nguyen, Kristen M. Turner, Sihan Wu, Amit D. Gujar, Jens Luebeck, Jihe Liu, Viraj Deshpande, Utkrisht Rajkumar, Sandeep Namburi, Samirkumar B. Amin, Eunhee Yi, Francesca Menghi, Johannes H. Schulte, Anton G. Henssen, Howard Y. Chang, Christine R. Beck, Paul S. Mischel, Vineet Bafna, Roel G.W. Verhaak - Nature Genetics 2020 被引用: 635

  2. Circular ecDNA promotes accessible chromatin and high oncogene expression

    著者: Sihan Wu, Kristen M. Turner, Nam Nguyen, Ramya Raviram, Marcella L. Erb, Jennifer Santini, Jens Luebeck, Utkrisht Rajkumar, Yarui Diao, Bin Li, Wenjing Zhang, Nathan M. Jameson, M. Ryan Corces, Jeffrey M. Granja, Xingqi Chen, Ceyda Çoruh, Armen Abnousi, Jack Houston, Zhen Ye, Rong Hu, Miao Yu, Hoon Kim, Julie A. Law, Roel G.W. Verhaak, Ming Hu, Frank B. Furnari, Howard Y. Chang, Bing Ren, Vineet Bafna, Paul S. Mischel - Nature 2019 被引用: 721

  3. Extrachromosomal oncogene amplification drives tumour evolution and genetic heterogeneity

    著者: Kristen M. Turner, Viraj Deshpande, Doruk Beyter, Tomoyuki Koga, Jessica M. Rusert, Catherine Lee, Bin Li, Karen C. Arden, Bing Ren, David A. Nathanson, Harley I. Kornblum, Michael D. Taylor, Sharmeela Kaushal, Webster K. Cavenee, Robert J. Wechsler‐Reya, Frank B. Furnari, Scott R. VandenBerg, P. Nagesh Rao, Geoffrey M. Wahl, Vineet Bafna, Paul S. Mischel - Nature 2017 被引用: 923

  4. Integrated Proteogenomic Characterization of Human High-Grade Serous Ovarian Cancer

    著者: Hui Zhang, Tao Liu, Zhen Zhang, Samuel Payne, Bai Zhang, Jason McDermott, Jianying Zhou, Vladislav Petyuk, Li Chen, Debjit Ray, Shisheng Sun, Feng Yang, Lijun Chen, Jing Wang, Punit Shah, Seong Won, Paul Aiyetan, Sunghee Woo, Yuan Tian, Marina A. Gritsenko, Therese RW Clauss, Caitlin H. Choi, Matthew Monroe, Stefani N. Thomas, Song Nie, Chaochao Wu, Ronald Moore, Kun‐Hsing Yu, David L. Tabb, David Fenyö, Vineet Bafna, Yue Wang, Henry Rodriguez, Emily S. Boja, Tara Hiltke, Robert Rivers, Lori J. Sokoll, Heng Zhu, Ie‐Ming Shih, Leslie Cope, Akhilesh Pandey, Bing Zhang, M Snyder, Douglas A. Levine, Richard Smith, Daniel W. Chan, Karin Rodland, Steven A. Carr, Michael A. Gillette, Karl R. Klauser, Eric Kuhn, D.R. Mani, Philipp Mertins, Karen A. Ketchum, Ratna R. Thangudu, Shuang Cai, Mauricio Oberti, Amanda G. Paulovich, Jeffrey R. Whiteaker, Nathan Edwards, Peter B. McGarvey, Subha Madhavan, Pei Wang, Daniel W. Chan, Akhilesh Pandey, Ie‐Ming Shih, Hui Zhang, Zhen Zhang, Heng Zhu, Leslie Cope, Gordon A. Whiteley, Steven J. Skates, Forest M. White, Douglas A. Levine, Emily S. Boja, Christopher R. Kinsinger, Tara Hiltke, Mehdi Mesri, Robert Rivers, Henry Rodriguez, Kenna M. Shaw, Stephen E. Stein, David Fenyö, Tao Liu, Jason McDermott, Samuel Payne, Karin Rodland, Richard Smith, Paul A. Rudnick, M Snyder, Yingming Zhao, Xian Chen, David F. Ransohoff, Andrew N. Hoofnagle, D.C. Liebler, Melinda E. Sanders, Zhiao Shi, Robbert J.C. Slebos, David L. Tabb, Bing Zhang ほか 10 名 - Cell 2016 被引用: 1,126

  5. Exploring the landscape of focal amplifications in cancer using AmpliconArchitect

    著者: Viraj Deshpande, Jens Luebeck, Nam Nguyen, Mehrdad Bakhtiari, Kristen M. Turner, Richard B. Schwab, Hannah Carter, Paul S. Mischel, Vineet Bafna - Nature Communications 2019 被引用: 368

  6. ecDNA hubs drive cooperative intermolecular oncogene expression

    著者: King L. Hung, Kathryn E. Yost, Liangqi Xie, Quanming Shi, Konstantin Helmsauer, Jens Luebeck, Robert Schöpflin, Joshua T. Lange, Rocío Chamorro González, Natasha E. Weiser, Celine Chen, Maria E. Valieva, Ivy Tsz-Lo Wong, Sihan Wu, Siavash R. Dehkordi, Connor V. Duffy, Katerina Kraft, Jun Tang, Julia A. Belk, John C. Rose, M. Ryan Corces, Jeffrey M. Granja, Rui Li, Utkrisht Rajkumar, Jordan Friedlein, Anindya Bagchi, Ansuman T. Satpathy, Robert Tjian, Stefan Mundlos, Vineet Bafna, Anton G. Henssen, Paul S. Mischel, Zhe Liu, Howard Y. Chang - Nature 2021 被引用: 337

  7. The evolutionary dynamics of extrachromosomal DNA in human cancers

    著者: Joshua T. Lange, John C. Rose, Celine Chen, Yuriy Pichugin, Liangqi Xie, Jun Tang, King L. Hung, Kathryn E. Yost, Quanming Shi, Marcella L. Erb, Utkrisht Rajkumar, Sihan Wu, Sabine Taschner‐Mandl, Marie Bernkopf, Charles Swanton, Zhe Liu, Weini Huang, Howard Y. Chang, Vineet Bafna, Anton G. Henssen, Benjamin Werner, Paul S. Mischel - Nature Genetics 2022 被引用: 195

  8. Extrachromosomal DNA in the cancerous transformation of Barrett’s oesophagus

    著者: Jens Luebeck, Alvin Wei Tian Ng, Patricia C. Galipeau, Xiaohong Li, Carissa A. Sanchez, Annalise Katz‐Summercorn, Hoon Kim, Sriganesh Jammula, Yudou He, Scott M. Lippman, Roel G.W. Verhaak, Carlo C. Maley, Ludmil B. Alexandrov, Brian J. Reid, Rebecca C. Fitzgerald, Thomas G. Paulson, Howard Y. Chang, Sihan Wu, Vineet Bafna, Paul S. Mischel - Nature 2023 被引用: 190

  9. HapCUT2: robust and accurate haplotype assembly for diverse sequencing technologies

    著者: Peter Edge, Vineet Bafna, Vikas Bansal - Genome Research 2016 被引用: 466

  10. Epigenetic dysregulation from chromosomal transit in micronuclei

    著者: Albert S. Agustinus, Duaa H. Al-Rawi, Bhargavi Dameracharla, Ramya Raviram, Bailey S.C.L. Jones, Stephanie Stransky, Lorenzo Scipioni, Jens Luebeck, Melody Di Bona, Danguolė Norkūnaitė, Robert M. Myers, Mercedes A. Duran Paez, Seongmin Choi, Britta Weigelt, Shira Yomtoubian, Andrew McPherson, Eléonore Toufektchan, Kristina Keuper, Paul S. Mischel, Vivek Mittal, Sohrab P. Shah, John Maciejowski, Zuzana Štorchová, Enrico Gratton, Peter Ly, Dan A. Landau, Mathieu F. Bakhoum, Richard P. Koche, Simone Sidoli, Vineet Bafna, Yael David, Samuel F. Bakhoum - Nature 2023 被引用: 115

  11. Targeted profiling of human extrachromosomal DNA by CRISPR-CATCH

    著者: King L. Hung, Jens Luebeck, Siavash R. Dehkordi, Caterina I. Colón, Rui Li, Ivy Tsz-Lo Wong, Ceyda Çoruh, Prashanthi Dharanipragada, Shirley H. Lomeli, Natasha E. Weiser, Gatien Moriceau, Xiao Zhang, Chris Bailey, Kathleen E. Houlahan, Wenting Yang, Rocío Chamorro González, Charles Swanton, Christina Curtis, Mariam Jamal‐Hanjani, Anton G. Henssen, Julie A. Law, William J. Greenleaf, Roger S. Lo, Paul S. Mischel, Vineet Bafna, Howard Y. Chang - Nature Genetics 2022 被引用: 123

  12. Mapping clustered mutations in cancer reveals APOBEC3 mutagenesis of ecDNA

    著者: Erik N. Bergstrom, Jens Luebeck, Mia Petljak, Azhar Khandekar, Mark Barnes, Tongwu Zhang, Christopher D. Steele, Nischalan Pillay, Maria Teresa Landi, Vineet Bafna, Paul S. Mischel, Reuben S. Harris, Ludmil B. Alexandrov - Nature 2022 被引用: 165

  13. Extrachromosomal oncogene amplification in tumour pathogenesis and evolution

    著者: Roel G.W. Verhaak, Vineet Bafna, Paul S. Mischel - Nature reviews. Cancer 2019 被引用: 346

  14. Extrachromosomal DNA: An Emerging Hallmark in Human Cancer

    著者: Sihan Wu, Vineet Bafna, Howard Y. Chang, Paul S. Mischel - Annual Review of Pathology Mechanisms of Disease 2021 被引用: 120

  15. NAD metabolic dependency in cancer is shaped by gene amplification and enhancer remodelling

    著者: Sudhir Chowdhry, Ciro Zanca, Utkrisht Rajkumar, Tomoyuki Koga, Yarui Diao, Ramya Raviram, Feng Liu, Kristen M. Turner, Huijun Yang, Elizabeth Brunk, Junfeng Bi, Frank B. Furnari, Vineet Bafna, Bing Ren, Paul S. Mischel - Nature 2019 被引用: 223

  16. A deep population reference panel of tandem repeat variation

    著者: Helyaneh Ziaei Jam, Yang Li, Ross DeVito, Nima Mousavi, Nichole Ma, Ibra Lujumba, Yagoub Adam, Mikhail O. Maksimov, Bonnie Huang, Egor Dolzhenko, Yunjiang Qiu, Fredrick Elishama Kakembo, Habi Joseph, Blessing Onyido, Jumoke Adeyemi, Mehrdad Bakhtiari, Jonghun Park, Sara Javadzadeh, Daudi Jjingo, Ezekiel Adebiyi, Vineet Bafna, Melissa Gymrek - Nature Communications 2023 被引用: 76

  17. Origins and impact of extrachromosomal DNA

    著者: Chris Bailey, Oriol Pich, Kerstin Thol, Thomas B. K. Watkins, Jens Luebeck, Andrew Rowan, Georgia Stavrou, Natasha E. Weiser, Bhargavi Dameracharla, Robert B. Bentham, Wei-Ting Lu, Jeanette Kittel, S.Y. Cindy Yang, Brooke E. Howitt, N. Sharma, Maria Litovchenko, Roberto Salgado, King L. Hung, Alex J. Cornish, David A. Moore, Richard S. Houlston, Vineet Bafna, Howard Y. Chang, Serena Nik‐Zainal, Nnennaya Kanu, Nicholas McGranahan, J. C. Ambrose, Paramasivam Arumugam, R. Bevers, Marta Bleda, F. Boardman-Pretty, C. R. Boustred, Helen Brittain, Matthew A. Brown, M. J. Caulfield, G. C. Chan, Adam Giess, John N. Griffin, Angela Hamblin, Seton Henderson, Tim Hubbard, Robert W. Jackson, L. J. Jones, D. Kasperaviciute, Melis Kayikci, A. Kousathanas, L. Lahnstein, A. Lakey, S. E. A. Leigh, Ivone Leong, F. J. Lopez, F. Maleady-Crowe, Meriel McEntagart, Federico Minneci, Jonathan S. Mitchell, L. Moutsianas, Melanie Mueller, Nirupa Murugaesu, Anna C. Need, Peter O’Donovan, Christopher A. Odhams, Christine Patch, D. Perez-Gil, M. B. Pereira, J. Pullinger, T. Rahim, A. Rendon, Tim Rogers, K. Savage, K. Sawant, Richard H. Scott, Afshan Siddiq, A. Sieghart, Sean Smith, A. Sosinsky, A. Stuckey, M. Tanguy, Ana Lisa Taylor Tavares, Elaine Thomas, S. R. Thompson, Arianna Tucci, M. J. Welland, Eric O. Williams, Kate Witkowska, S. M. Wood, Magdalena Zarowiecki, Adrienne M. Flanagan, Paul S. Mischel, Mariam Jamal‐Hanjani, Charles Swanton - Nature 2024 被引用: 142

  18. Plasticity of Extrachromosomal and Intrachromosomal BRAF Amplifications in Overcoming Targeted Therapy Dosage Challenges

    著者: Kai Song, Jenna K. Minami, Arthur Huang, Siavash R. Dehkordi, Shirley H. Lomeli, Jens Luebeck, Mark H. Goodman, Gatien Moriceau, Oscar Krijgsman, Prashanthi Dharanipragada, Trevor Ridgley, William P. Crosson, Jesus Salazar, Eli Pazol, Gabriel Karin, Rachana Jayaraman, Nikolas G. Balanis, Salwan Alhani, Kyle Sheu, Johanna ten Hoeve, Amelia Palermo, Stephen E. Motika, T. Niroshi Senaratne, Kim H. Paraiso, Paul J. Hergenrother, P. Nagesh Rao, Asha S. Multani, Daniel S. Peeper, Vineet Bafna, Roger S. Lo, Thomas G. Graeber - Cancer Discovery 2021 被引用: 77

  19. Global DNA hypomethylation coupled to repressive chromatin domain formation and gene silencing in breast cancer

    著者: Gary C. Hon, R. David Hawkins, Otávia L. Caballero, Christine Lo, Ryan Lister, Mattia Pelizzola, Armand Valsesia, Zhen Ye, Samantha Kuan, Lee Edsall, Anamaria A. Camargo, Brian J. Stevenson, Joseph R. Ecker, Vineet Bafna, Robert L. Strausberg, Andrew J.G. Simpson, Bing Ren - Genome Research 2011 被引用: 620

  20. AmpliconReconstructor integrates NGS and optical mapping to resolve the complex structures of focal amplifications

    著者: Jens Luebeck, Ceyda Çoruh, Siavash R. Dehkordi, Joshua T. Lange, Kristen M. Turner, Viraj Deshpande, Dave A. Pai, Chao Zhang, Utkrisht Rajkumar, Julie A. Law, Paul S. Mischel, Vineet Bafna - Nature Communications 2020 被引用: 98

  21. Variable number tandem repeats mediate the expression of proximal genes

    著者: Mehrdad Bakhtiari, Jonghun Park, Yuan-Chun Ding, Sharona Shleizer-Burko, Susan L. Neuhausen, Bjarni V. Halldórsson, Kāri Stefánsson, Melissa Gymrek, Vineet Bafna - Nature Communications 2021 被引用: 107

  22. Coordinated inheritance of extrachromosomal DNAs in cancer cells

    著者: King L. Hung, Matthew G. Jones, Ivy Tsz-Lo Wong, Ellis J. Curtis, Joshua T. Lange, Britney Jiayu He, Jens Luebeck, Rachel Schmargon, Elisa Scanu, Lotte Brückner, Xiaowei Yan, Rui Li, Aditi Gnanasekar, Rocío Chamorro González, Julia A. Belk, Zhonglin Liu, Bruno Melillo, Vineet Bafna, Jan R. Dörr, Benjamin Werner, Weini Huang, Benjamin F. Cravatt, Anton G. Henssen, Paul S. Mischel, Howard Y. Chang - Nature 2024 被引用: 77

  23. De novo somatic mutations in components of the PI3K-AKT3-mTOR pathway cause hemimegalencephaly

    著者: Jeong Ho Lee, My N. Huynh, Jennifer L. Silhavy, Sangwoo Kim, Tracy Dixon‐Salazar, Andrew Heiberg, Eric Scott, Vineet Bafna, Kiley J. Hill, Adrienne Collazo, Vincent Funari, Carsten Russ, Stacey B. Gabriel, Gary W. Mathern, Joseph G. Gleeson - Nature Genetics 2012 被引用: 696

  24. Enhancing transcription–replication conflict targets ecDNA-positive cancers

    著者: Jun Tang, Natasha E. Weiser, Guiping Wang, Sudhir Chowdhry, Ellis J. Curtis, Yanding Zhao, Ivy Tsz-Lo Wong, Georgi K. Marinov, Rui Li, Philip Hanoian, Edison Tse, Salvador Garcia Mojica, Ryan J. Hansen, Joshua Plum, Auzon Steffy, Snezana Milutinovic, S. Todd Meyer, Jens Luebeck, Yanbo Wang, Shu Zhang, Nicolas Altemose, Christina Curtis, William J. Greenleaf, Vineet Bafna, Stephen J. Benkovic, Anthony B. Pinkerton, Shailaja Kasibhatla, Christian A. Hassig, Paul S. Mischel, Howard Y. Chang - Nature 2024 被引用: 88