Xiaohui Xie
1994–2026 年に発表
- 309
- 論文数
- 48,883
- 被引用数
- 86
- h 指数
- 213
- i10 指数
被引用数
引用元
国・地域
機関
分野
- Biochemistry, Genetics and Molecular Biology55.2%
- Computer Science13.7%
- Medicine10.9%
- Agricultural and Biological Sciences4.3%
- Engineering3.9%
- Neuroscience3%
- その他9%
トピック
- Genomics and Chromatin Dynamics4.9%
- Epigenetics and DNA Methylation4.7%
- Genomics and Phylogenetic Studies2.9%
- RNA modifications and cancer2.5%
- RNA Research and Splicing2.3%
- RNA and protein synthesis mechanisms2%
- その他80.7%
共著者
全論文
- A Bivalent Chromatin Structure Marks Key Developmental Genes in Embryonic Stem Cells
著者: B Bernstein, Tarjei S. Mikkelsen, Xiaohui Xie, Michael Kamal, Dana J. Huebert, James Cuff, Ben Fry, Alex Meissner, Marius Wernig, Kathrin Plath, Rudolf Jaenisch, Alexandre Wagschal, Robert Feil, Stuart L. Schreiber, Eric S. Lander - Cell 2006 被引用: 5,469
- Identifying viruses from metagenomic data using deep learning
著者: Jie Ren, Kai Song, Chao Deng, Nathan A. Ahlgren, Jed A. Fuhrman, Yi Li, Xiaohui Xie, Ryan Poplin, Fengzhu Sun - Quantitative Biology, Quant. Biol. 2020 被引用: 682
- DanQ: a hybrid convolutional and recurrent deep neural network for quantifying the function of DNA sequences
著者: Daniel Quang, Xiaohui Xie - Nucleic Acids Research 2016 被引用: 943
- Proceedings of the Eleventh ACM International Conference on Web Search and Data Mining, WSDM 2018, Marina Del Rey, CA, USA, February 5-9, 2018
著者: Yan Liu, Jimmy Xiangji Huang, Local Chair, Roger Luo, Evgeniy Chairs, Rong Gabrilovich, David Carmel, Jaap Kamps, Shou-De Chairs, Xing Lin, Qi Yu, Jianhui Chen, Yi Wsdm', ChengXiang Zhai, Yi Wsdm', Zhai Chengxiang, Wsdm', Zhuyun Dai, Chenyan Xiong, Jamie Callan, ;, Zhiyuan Liu, Ido Guy, Parisa Kaghazgaran, James Caverlee, ;, Anna Squicciarini, Yao Ma, ;, J Com, Kien Pham, Acio Santos, Juliana Freire, Jiezhong Qiu, ;, Yuxiao Dong, Hao Ma, ; Jie Tang, Hongwei Wang, ( Shanghai, Jiao Tong University, &, Zihan Wang, Ziheng Jiang, Zhaochun Ren, Xiaohui Xie, Yiqun Liu, ;, Min Zhang, Shaoping Ma, Qian Yu, Wai Lam, Xian Zhou, Yanyan Shen, Yanmin Zhu, Linpeng Huang, ( Shanghai, Jiao Tong, University, Sutanay Choudhury, Sumit Purohit, ), Peng Lin, Yinghui Wu, Lawrence Holder, Xiang Ren, Craig Knoblock, ; California, ), William Wang, Yu Su, ;, Santa Barbara, Rishabh Mehrotra, ; Ahmed, Hassan Awadallah, Mihajlo Grbovic, Thanasis Noulas (airbnb, Inc, Jiejun Xu, ( Hrl Laboratories, ) Llc, Hanghang Tong, ), Tsai-Ching Lu, (hrl Laboratories, ) Llc, Jingrui He, Chengxiang Zhai, Yan Liu, Hui Fang - WSDM 2018 被引用: 354
- Genome-wide detection and characterization of positive selection in human populations
著者: Pardis C. Sabeti, Patrick Varilly, Ben Fry, Jason Lohmueller, Elizabeth Hostetter, Chris Cotsapas, Xiaohui Xie, Elizabeth H. Byrne, Steven A. McCarroll, Rachelle Gaudet, S. F. Schaffner, Eric S. Lander - Nature 2007 被引用: 2,294
- Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
著者: Tarjei S. Mikkelsen, Manching Ku, David B. Jaffe, Biju Issac, E. James Lieberman, Georgia Giannoukos, Pablo Álvarez, William W. Brockman, Tae-Kyung Kim, Richard P. Koche, William Lee, Eric M. Mendenhall, Aisling O’Donovan, Aviva Presser, Carsten Russ, Xiaohui Xie, Alexander Meissner, Marius Wernig, Rudolf Jaenisch, Chad Nusbaum, Eric S. Lander, B Bernstein - Nature 2007 被引用: 4,205
- DANN: a deep learning approach for annotating the pathogenicity of genetic variants
著者: Daniel Quang, Yifei Chen, Xiaohui Xie - Bioinformatics, Bioinform. 2014 被引用: 1,119
- AFTer-UNet: Axial Fusion Transformer UNet for Medical Image Segmentation
著者: Xiangyi Yan, Hao Tang, Shanlin Sun, Haoyu Ma, Deying Kong, Xiaohui Xie - IEEE/CVF Winter Conference on Applications of Computer Vision (WACV) 2022 被引用: 159
- Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium
著者: Li‐Jun Ma, H. Charlotte van der Does, Katherine A. Borkovich, Jeffrey J. Coleman, Marie‐Josée Daboussi, Antonio Di Pietro, Marie Dufresne, Michael Freitag, Manfred Grabherr, Bernard Henrissat, Petra M. Houterman, Seogchan Kang, Won‐Bo Shim, Charles P. Woloshuk, Xiaohui Xie, Jin‐Rong Xu, J. F. Antoniw, Scott Baker, Burton H. Bluhm, Andrew Breakspear, Daren W. Brown, Robert A. E. Butchko, Sinéad B. Chapman, Richard Coulson, Pedro M. Coutinho, Étienne Danchin, Andrew C. Diener, Liane Rosewich Gale, Donald M. Gardiner, Stephen A. Goff, K. E. Hammond‐Kosack, Karen Hilburn, Aurélie Hua‐Van, Wilfried Jonkers, Kemal Kazan, Chinnappa D. Kodira, Michael Koehrsen, Lokesh Kumar, Yong‐Hwan Lee, Liande Li, John M. Manners, Diego Miranda‐Saavedra, Mala Mukherjee, Gyungsoon Park, Jongsun Park, Sook-Young Park, Robert H. Proctor, Aviv Regev, Carmen Ruiz‐Roldán, Divya Sain, Sharadha Sakthikumar, Sean M. Sykes, David C. Schwartz, B. Gillian Turgeon, Ilan Wapinski, O. C. Yoder, Sarah Young, Qiandong Zeng, Shiguo Zhou, James E. Galagan, Christina A. Cuomo, Harold Kistler, Martijn Rep - Nature 2010 被引用: 1,857
- Genome-Wide Detection of Single-Nucleotide and Copy-Number Variations of a Single Human Cell
著者: Chenghang Zong, Sijia Lü, Alec R. Chapman, Xiaohui Xie - Science 2012 被引用: 1,222
- Recurrent Mask Refinement for Few-Shot Medical Image Segmentation
著者: Hao Tang, Xingwei Liu, Shanlin Sun, Xiangyi Yan, Xiaohui Xie - IEEE/CVF International Conference on Computer Vision (ICCV) 2021 被引用: 138
- Three-dimensional genome structures of single diploid human cells
著者: Longzhi Tan, Dong Xing, Chi-Han Chang, Heng Li, Xiaohui Xie - Science 2018 被引用: 549
- AnatomyNet: Deep learning for fast and fully automated whole‐volume segmentation of head and neck anatomy
著者: Wentao Zhu, Yufang Huang, Liang Zeng, Xuming Chen, Yong Liu, Zhen Qian, Nan Du, Wei Fan, Xiaohui Xie - Medical Physics 2018 被引用: 526
- VTNFP: An Image-Based Virtual Try-On Network With Body and Clothing Feature Preservation
著者: Ruiyun Yu, Xiaoqi Wang, Xiaohui Xie - IEEE/CVF International Conference on Computer Vision (ICCV) 2019 被引用: 177
- Clinically applicable deep learning framework for organs at risk delineation in CT images
著者: Hao Tang, Xuming Chen, Yang Liu, Zhipeng Lu, Junhua You, Mingzhou Yang, Shengyu Yao, Guoqi Zhao, Yi Xu, Tingfeng Chen, Yong Liu, Xiaohui Xie, Yong Liu, Xiaohui Xie - Nature Machine Intelligence, Nat. Mach. Intell. 2019 被引用: 187
- Genome sequence, comparative analysis and haplotype structure of the domestic dog
著者: Broad Sequencing Platform members, Kerstin Lindblad‐Toh, Claire M. Wade, Tarjei S. Mikkelsen, Elinor K. Karlsson, David B. Jaffe, Michael Kamal, Michèle Clamp, Jean L. Chang, Edward J. Kulbokas, Michael C. Zody, Evan Mauceli, Xiaohui Xie, Matthew Breen, Robert K. Wayne, Elaine A. Ostrander, Chris P. Ponting, Francis Galibert, Douglas R. Smith, Pieter DeJong, Ewen F. Kirkness, Pablo Álvarez, Tara Biagi, William W. Brockman, Jonathan A. Butler, Chee-Wye Chin, April Cook, James Cuff, Mark J. Daly, David DeCaprio, Sante Gnerre, Manfred Grabherr, Manolis Kellis, Michael Kleber, Carolyne Bardeleben, Leo Goodstadt, Andreas Heger, Christophe Hitte, Lisa Kim, Klaus‐Peter Koepfli, Heidi G. Parker, John P. Pollinger, Stephen M. J. Searle, Nathan B. Sutter, Rachael Thomas, Caleb Webber, Eric S. Lander - Nature 2005 被引用: 2,639
- A deep learning-based auto-segmentation system for organs-at-risk on whole-body computed tomography images for radiation therapy
著者: Xuming Chen, Shanlin Sun, Narisu Bai, Kun Han, Qianqian Liu, Shengyu Yao, Hao Tang, Chupeng Zhang, Zhipeng Lu, Qian Huang, Guoqi Zhao, Yi Xu, Tingfeng Chen, Xiaohui Xie, Yong Liu - Radiotherapy and Oncology 2021 被引用: 162
- Single-cell whole-genome analyses by Linear Amplification via Transposon Insertion (LIANTI)
著者: Chongyi Chen, Dong Xing, Longzhi Tan, Heng Li, Guangyu Zhou, Lei Huang, Xiaohui Xie - Science 2017 被引用: 425
- EI-CLIP: Entity-aware Interventional Contrastive Learning for E-commerce Cross-modal Retrieval
著者: Haoyu Ma, Handong Zhao, Zhe Lin, Ajinkya Kale, Zhangyang Wang, Tong Yu, Jiuxiang Gu, Sunav Choudhary, Xiaohui Xie - IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR) 2022 被引用: 58
- ShieldGPT: An LLM-based Framework for DDoS Mitigation
著者: Tongze Wang, Xiaohui Xie, Lei Zhang, Chuyi Wang, Liang Zhang, Yong Cui - Asia-Pacific Workshop on Networking, APNet 2024 被引用: 41
- Gene expression inference with deep learning
著者: Yifei Chen, Yi Li, Rajiv Narayan, Aravind Subramanian, Xiaohui Xie - Bioinformatics, Bioinform. 2015 被引用: 452
- NoduleNet: Decoupled False Positive Reduction for Pulmonary Nodule Detection and Segmentation
著者: Hao Tang, Chupeng Zhang, Xiaohui Xie - Lecture notes in computer science, MICCAI (6) 2019 被引用: 129
- A high-resolution map of human evolutionary constraint using 29 mammals
著者: Kerstin Lindblad‐Toh, Manuel Garber, Or Zuk, Michael F. Lin, Brian J. Parker, Stefan Washietl, Pouya Kheradpour, Jason Ernst, Gregory E. Jordan, Evan Mauceli, Lucas D. Ward, Craig B. Lowe, Alisha K. Holloway, Michèle Clamp, Sante Gnerre, Jessica Alföldi, Kathryn Beal, Jean L. Chang, Hiram Clawson, James Cuff, Federica Di Palma, Stephen Fitzgerald, Paul Flicek, Mitchell Guttman, Melissa J. Hubisz, David B. Jaffe, Irwin Jungreis, W. James Kent, Dennis Kostka, Marcia Lara, André L. Martins, Tim Massingham, Ida Moltke, Brian J. Raney, Matthew D. Rasmussen, Jim Robinson, Alexander Stark, Albert J. Vilella, Jiayu Wen, Xiaohui Xie, Michael C. Zody, Kim C. Worley, Christie Kovar, Donna M. Muzny, Richard A. Gibbs, Wesley C. Warren, Elaine R. Mardis, George M. Weinstock, Richard K. Wilson, Ewan Birney, Elliott H. Margulies, Javier Herrero, Eric D. Green, David Haussler, Adam Siepel, Nick Goldman, Katherine S. Pollard, Jakob Skou Pedersen, Eric S. Lander, Manolis Kellis - Nature 2011 被引用: 1,228
- Integrated analysis of multimodal single-cell data with structural similarity
著者: Yingxin Cao, Laiyi Fu, Jie Wu, Qinke Peng, Qing Nie, Jing Zhang, Xiaohui Xie - Nucleic Acids Research 2022 被引用: 107
