Akhilesh Pandey
Active 1877–2025
- 253
- Papers
- 54,092
- Citations
- 112
- h-index
- 237
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology52.2%
- Medicine21.7%
- Chemistry10.7%
- Neuroscience4.1%
- Immunology and Microbiology3.5%
- Computer Science3.1%
- Other4.7%
Topics
- Bioinformatics and Genomic Networks5.7%
- Advanced Proteomics Techniques and Applications4.6%
- Mass Spectrometry Techniques and Applications2.3%
- Computational Drug Discovery Methods2.1%
- Metabolomics and Mass Spectrometry Studies2%
- RNA modifications and cancer1.9%
- Other81.4%
Coauthors
- Anil K. Madugundu32
- Santosh Renuse30
- Thottethodi Subrahmanya Keshava Prasad25
- Raghothama Chaerkady22
- H. C. Harsha20
- Harsha Gowda20
- Kiran K. Mangalaparthi18
- Raja Sekhar Nirujogi17
- Rajesh Raju17
- Jun Zhong16
- Dong‐Gi Mun15
- Henrik Molina15
- Arivusudar Marimuthu14
- Lavanya Balakrishnan14
- Matthias Mann14
- Rohit Budhraja14
- Seul Kee Byeon14
- Min‐Sik Kim13
- Babylakshmi Muthusamy12
- Jyoti Sharma12
- Kishore Garapati12
- Renu Goel12
- Éva Morava12
- Dário Eluan Kalume11
All papers
- Pyruvate Kinase M2 Is a PHD3-Stimulated Coactivator for Hypoxia-Inducible Factor 1
Authors: Weibo Luo, Hongxia Hu, Ryan Chang, Jun Zhong, Matthew Knabel, Robert N. O’Meally, Robert N. Cole, Akhilesh Pandey, Gregg L. Semenza - Cell 2011 cited by 1,464
- Human Protein Reference Database - 2009 update
Authors: T. S. Keshava Prasad, Renu Goel, Kumaran Kandasamy, Shivakumar Keerthikumar, Sameer Kumar, Suresh Mathivanan, Deepthi Telikicherla, Rajesh Raju, Beema Shafreen, Abhilash Venugopal, Lavanya Balakrishnan, Arivusudar Marimuthu, Sutopa Banerjee, Devi S. Somanathan, Aimy Sebastian, Sandhya Rani, Somak Ray, C. J. Harrys Kishore, Sashi Kanth, Mukhtar Ahmed, Manoj Kumar Kashyap, Riaz Mohmood, Y. L. Ramachandra, V. Krishna, B. Abdul Rahiman, S. Sujatha Mohan, Prathibha Ranganathan, Subhashri Ramabadran, Raghothama Chaerkady, Akhilesh Pandey - Nucleic Acids Research, Nucleic Acids Res. 2008 cited by 3,309
- Proteogenomic Analysis of Human Colon Cancer Reveals New Therapeutic Opportunities
Authors: Suhas Vasaikar, Chen Huang, Xiaojing Wang, Vladislav Petyuk, Sara R. Savage, Bo Wen, Yongchao Dou, Yun Zhang, Zhiao Shi, Osama A. Arshad, Marina A. Gritsenko, Lisa J. Zimmerman, Jason McDermott, Therese RW Clauss, Ronald Moore, Rui Zhao, Matthew Monroe, Yi-Ting Wang, Matthew Chambers, Robbert J.C. Slebos, Ken S. Lau, Qianxing Mo, Li Ding, Matthew J. Ellis, Mathangi Thiagarajan, Christopher R. Kinsinger, Henry Rodriguez, Richard Smith, Karin Rodland, D.C. Liebler, Tao Liu, Bing Zhang, Akhilesh Pandey, Amanda G. Paulovich, Andrew N. Hoofnagle, D.R. Mani, Daniel W. Chan, David F. Ransohoff, David Fenyö, David L. Tabb, Douglas A. Levine, Emily S. Boja, Eric Kuhn, Forest M. White, Gordon A. Whiteley, Heng Zhu, Hui Zhang, Ie‐Ming Shih, Jasmin Bavarva, Jeffrey R. Whiteaker, Karen A. Ketchum, Karl R. Clauser, Kelly V. Ruggles, Kimberly Elburn, Linda I. Hannick, Mark A. Watson, Mauricio Oberti, Mehdi Mesri, Melinda E. Sanders, Melissa Borucki, Michael A. Gillette, M Snyder, Nathan Edwards, Negin Vatanian, Paul A. Rudnick, Peter B. McGarvey, Philip Mertins, R. Reid Townsend, Ratna R. Thangudu, Robert Rivers, Samuel Payne, Sherri R. Davies, Shuang Cai, Stephen E. Stein, Steven A. Carr, Steven J. Skates, Subha Madhavan, Tara Hiltke, Xian Chen, Yingming Zhao, Yue Wang, Zhen Zhang - Cell 2019 cited by 862
- Proteogenomic Landscape of Breast Cancer Tumorigenesis and Targeted Therapy
Authors: Karsten Krug, Eric J. Jaehnig, Shankha Satpathy, Lili M. Blumenberg, Alla Y. Karpova, Meenakshi Anurag, George Miles, Philipp Mertins, Yifat Geffen, Lauren C. Tang, David I. Heiman, Song Cao, Yosef E. Maruvka, Jonathan T. Lei, Chen Huang, Ramani Kothadia, Antonio Colaprico, Chet Birger, Jarey H. Wang, Yongchao Dou, Bo Wen, Zhiao Shi, Yuxing Liao, Maciej Wiznerowicz, Matthew A. Wyczalkowski, Xi Chen, Jacob J. Kennedy, Amanda G. Paulovich, Mathangi Thiagarajan, Christopher R. Kinsinger, Tara Hiltke, Emily S. Boja, Mehdi Mesri, Ana I. Robles, Henry Rodriguez, Thomas F. Westbrook, Li Ding, Gad Getz, Karl R. Clauser, David Fenyö, Kelly V. Ruggles, Bing Zhang, D.R. Mani, Steven A. Carr, Matthew J. Ellis, Michael A. Gillette, Shayan C. Avanessian, Shuang Cai, Daniel Chan, Xian Chen, Nathan Edwards, Andrew N. Hoofnagle, M. Harry Kane, Karen A. Ketchum, Eric Kuhn, Douglas A. Levine, Shunqiang Li, D.C. Liebler, Tao Liu, Jingqin Luo, Subha Madhavan, Christopher G. Maher, Jason McDermott, Peter B. McGarvey, Mauricio Oberti, Akhilesh Pandey, Samuel Payne, David F. Ransohoff, Robert Rivers, Karin Rodland, Paul A. Rudnick, Melinda E. Sanders, Kenna M. Shaw, Ie‐Ming Shih, Robbert J.C. Slebos, Richard Smith, M Snyder, Stephen E. Stein, David L. Tabb, Ratna R. Thangudu, Stefani N. Thomas, Yue Wang, Forest M. White, Jeffrey R. Whiteaker, Gordon A. Whiteley, Hui Zhang, Zhen Zhang, Yingming Zhao, Heng Zhu, Lisa J. Zimmerman - Cell 2020 cited by 575
- Stable Isotope Labeling by Amino Acids in Cell Culture, SILAC, as a Simple and Accurate Approach to Expression Proteomics
Authors: Shao‐En Ong, Blagoy Blagoev, Irina Kratchmarova, Dan Bach Kristensen, Hanno Steen, Akhilesh Pandey, Matthias Mann - Molecular & Cellular Proteomics 2002 cited by 5,599
- A draft map of the human proteome
Authors: Min‐Sik Kim, Sneha M. Pinto, Derese Getnet, Raja Sekhar Nirujogi, Srikanth S. Manda, Raghothama Chaerkady, Anil K. Madugundu, Dhanashree Kelkar, Ruth Isserlin, Shobhit Jain, Joji Kurian Thomas, Babylakshmi Muthusamy, Pamela Leal, Praveen Kumar, Nandini A. Sahasrabuddhe, Lavanya Balakrishnan, Jayshree Advani, Bijesh George, Santosh Renuse, Lakshmi Dhevi N. Selvan, Arun H. Patil, Vishalakshi Nanjappa, Aneesha Radhakrishnan, Samarjeet Prasad, Tejaswini Subbannayya, Rajesh Raju, Manish Kumar, Sreelakshmi K. Sreenivasamurthy, Arivusudar Marimuthu, Gajanan Sathe, Sandip Chavan, Keshava K. Datta, Yashwanth Subbannayya, Apeksha Sahu, Soujanya D. Yelamanchi, Savita Jayaram, Pavithra Rajagopalan, Jyoti Sharma, Krishna R. Murthy, Nazia Syed, Renu Goel, Aafaque Ahmad Khan, Sartaj Ahmad, Gourav Dey, Keshav Mudgal, Aditi Chatterjee, Tai‐Chung Huang, Jun Zhong, Xinyan Wu, Patrick G. Shaw, Donald Freed, Muhammad Saddiq Zahari, Kanchan K. Mukherjee, Subramanian Shankar, Anita Mahadevan, Henry Lam, Chris J. Mitchell, Susarla Krishna Shankar, Parthasarathy Satishchandra, John T. Schroeder, Ravi Sirdeshmukh, Anirban Maitra, Steven D. Leach, Charles G. Drake, Marc K. Halushka, Thottethodi Subrahmanya Keshava Prasad, Ralph H. Hruban, Candace L. Kerr, Gary D. Bader, Christine A. Iacobuzio–Donahue, Harsha Gowda, Akhilesh Pandey - Nature 2014 cited by 2,311
- Vesiclepedia: A Compendium for Extracellular Vesicles with Continuous Community Annotation
Authors: Hina Kalra, Richard J. Simpson, Hong Ji, Elena Aïkawa, Peter Altevogt, Philip W. Askenase, Vincent C. Bond, Francesc E. Borràs, Xandra O. Breakefield, Vivian Budnik, Edit I. Buzás, Giovanni Camussi, Aled Clayton, Emanuele Cocucci, Juan Manuel Falcón‐Pérez, Susanne Gabrielsson, Yong Song Gho, Dwijendra K. Gupta, H. C. Harsha, An Hendrix, Andrew F. Hill, Jameel M. Inal, Guido Jenster, Eva‐Maria Krämer‐Albers, Sai Kiang Lim, Alicia Llorente, Jan Lötvall, Antonio Marcilla, Lucia Mincheva‐Nilsson, Irina Nazarenko, Rienk Nieuwland, Esther N. M. Nolte-‘t Hoen, Akhilesh Pandey, Tushar Patel, Melissa Piper, Stefano Pluchino, Thottethodi Subrahmanya Keshava Prasad, Lawrence Rajendran, Graça Raposo, Michel Record, Gavin E. Reid, Francisco Sánchez‐Madrid, Raymond M. Schiffelers, Pia Siljander, Allan Stensballe, Willem Stoorvogel, Douglas D. Taylor, Clotilde Théry, Hadi Valadi, Bas W. M. van Balkom, Jesús Vázquez, Michel Vidal, Marca H. M. Wauben, María Yáñez‐Mó, Margot Zoeller, Suresh Mathivanan - PLoS Biology 2012 cited by 1,363
- Integrated Proteogenomic Characterization of Human High-Grade Serous Ovarian Cancer
Authors: Hui Zhang, Tao Liu, Zhen Zhang, Samuel Payne, Bai Zhang, Jason McDermott, Jianying Zhou, Vladislav Petyuk, Li Chen, Debjit Ray, Shisheng Sun, Feng Yang, Lijun Chen, Jing Wang, Punit Shah, Seong Won, Paul Aiyetan, Sunghee Woo, Yuan Tian, Marina A. Gritsenko, Therese RW Clauss, Caitlin H. Choi, Matthew Monroe, Stefani N. Thomas, Song Nie, Chaochao Wu, Ronald Moore, Kun‐Hsing Yu, David L. Tabb, David Fenyö, Vineet Bafna, Yue Wang, Henry Rodriguez, Emily S. Boja, Tara Hiltke, Robert Rivers, Lori J. Sokoll, Heng Zhu, Ie‐Ming Shih, Leslie Cope, Akhilesh Pandey, Bing Zhang, M Snyder, Douglas A. Levine, Richard Smith, Daniel W. Chan, Karin Rodland, Steven A. Carr, Michael A. Gillette, Karl R. Klauser, Eric Kuhn, D.R. Mani, Philipp Mertins, Karen A. Ketchum, Ratna R. Thangudu, Shuang Cai, Mauricio Oberti, Amanda G. Paulovich, Jeffrey R. Whiteaker, Nathan Edwards, Peter B. McGarvey, Subha Madhavan, Pei Wang, Daniel W. Chan, Akhilesh Pandey, Ie‐Ming Shih, Hui Zhang, Zhen Zhang, Heng Zhu, Leslie Cope, Gordon A. Whiteley, Steven J. Skates, Forest M. White, Douglas A. Levine, Emily S. Boja, Christopher R. Kinsinger, Tara Hiltke, Mehdi Mesri, Robert Rivers, Henry Rodriguez, Kenna M. Shaw, Stephen E. Stein, David Fenyö, Tao Liu, Jason McDermott, Samuel Payne, Karin Rodland, Richard Smith, Paul A. Rudnick, M Snyder, Yingming Zhao, Xian Chen, David F. Ransohoff, Andrew N. Hoofnagle, D.C. Liebler, Melinda E. Sanders, Zhiao Shi, Robbert J.C. Slebos, David L. Tabb, Bing Zhang and 10 more - Cell 2016 cited by 1,126
- C9orf72 nucleotide repeat structures initiate molecular cascades of disease
Authors: Aaron R. Haeusler, Christopher J. Donnelly, Goran Periz, Eric A.J. Simko, Patrick G. Shaw, Min‐Sik Kim, Nicholas J. Maragakis, Juan C. Troncoso, Akhilesh Pandey, Rita Sattler, Jeffrey D. Rothstein, Jiou Wang - Nature 2014 cited by 999
- Homer1a drives homeostatic scaling-down of excitatory synapses during sleep
Authors: Graham H. Diering, Raja Sekhar Nirujogi, Richard H. Roth, Paul F. Worley, Akhilesh Pandey, Richard L. Huganir - Science 2017 cited by 545
- Integrated Proteomic and Glycoproteomic Characterization of Human High-Grade Serous Ovarian Carcinoma
Authors: Yingwei Hu, Jianbo Pan, Punit Shah, Minghui Ao, Stefani N. Thomas, Yang Liu, Lijun Chen, Michael Schnaubelt, David Clark, Henry Rodriguez, Emily S. Boja, Tara Hiltke, Christopher R. Kinsinger, Karin Rodland, Qing Kay Li, Jiang Qian, Zhen Zhang, Daniel W. Chan, Hui Zhang, Akhilesh Pandey, Amanda G. Paulovich, Andrew N. Hoofnagle, Bing Zhang, D.R. Mani, D.C. Liebler, David F. Ransohoff, David Fenyö, David L. Tabb, Douglas A. Levine, Eric Kuhn, Forest M. White, Gordon A. Whiteley, Heng Zhu, Ie‐Ming Shih, Jasmin Bavarva, Jason McDermott, Jeffrey R. Whiteaker, Karen A. Ketchum, Karl R. Clauser, Kelly V. Ruggles, Kimberly Elburn, Li Ding, Linda I. Hannick, Lisa J. Zimmerman, Mark A. Watson, Mathangi Thiagarajan, Matthew J. Ellis, Mauricio Oberti, Mehdi Mesri, Melinda E. Sanders, Melissa Borucki, Michael A. Gillette, M Snyder, Nathan Edwards, Negin Vatanian, Paul A. Rudnick, Peter B. McGarvey, Philip Mertins, R. Reid Townsend, Ratna R. Thangudu, Richard Smith, Robert Rivers, Robert J.C. Slebos, Samuel Payne, Sherri R. Davies, Shuang Cai, Stephen E. Stein, Steven A. Carr, Steven J. Skates, Subha Madhavan, Tao Liu, Xian Chen, Yingming Zhao, Yue Wang, Zhiao Shi - Cell Reports 2020 cited by 155
- Transcriptomic and proteomic profiling of KEAP1 disrupted and sulforaphane-treated human breast epithelial cells reveals common expression profiles
Authors: Abena S. Agyeman, Raghothama Chaerkady, Patrick G. Shaw, Nancy E. Davidson, Kala Visvanathan, Akhilesh Pandey, Thomas W. Kensler - Breast Cancer Research and Treatment 2011 cited by 250
- Development of a multiomics model for identification of predictive biomarkers for COVID-19 severity: a retrospective cohort study
Authors: Seul Kee Byeon, Anil K. Madugundu, Kishore Garapati, Madan Gopal Ramarajan, Mayank Saraswat, Praveen Kumar, Tudor Hughes, Rameen Shah, Mrinal M. Patnaik, Nicholas Chia, Susan Ashrafzadeh‐Kian, Joseph D. Yao, Bobbi S. Pritt, Roberto Cattaneo, Mohamed E. Salama, Roman M. Zenka, Benjamin R. Kipp, Stefan K. Grebe, Ravinder J. Singh, Amir A. Sadighi Akha, Alicia Algeciras‐Schimnich, Surendra Dasari, Janet E. Olson, Jesse R. Walsh, A J Venkatakrishnan, Garrett Jenkinson, John C. O’Horo, Andrew D. Badley, Akhilesh Pandey - The Lancet Digital Health 2022 cited by 87
- Quantitative Proteomic Profiling of Cerebrospinal Fluid to Identify Candidate Biomarkers for Alzheimer's Disease
Authors: Gajanan Sathe, Chan Hyun Na, Santosh Renuse, Anil K. Madugundu, Marilyn Albert, Abhay Moghekar, Akhilesh Pandey - PROTEOMICS - CLINICAL APPLICATIONS 2018 cited by 131
- GBA1 deficiency negatively affects physiological α-synuclein tetramers and related multimers
Authors: Sangjune Kim, Seung Pil Yun, Saebom Lee, George K. E. Umanah, Veera Venkata Ratnam Bandaru, Xiling Yin, Peter Rhee, Senthilkumar S. Karuppagounder, Seung‐Hwan Kwon, Hojae Lee, Xiaobo Mao, Donghoon Kim, Akhilesh Pandey, Gabsang Lee, Valina L. Dawson, Ted M. Dawson, Han Seok Ko - National Academy of Sciences, Proceedings of the National Academy of Sciences 2018 cited by 177
- Proteomics to study genes and genomes
Authors: Akhilesh Pandey, Matthias Mann - Nature 2000 cited by 2,378
- CHESS: a new human gene catalog curated from thousands of large-scale RNA sequencing experiments reveals extensive transcriptional noise
Authors: Mihaela Pertea, Alaina Shumate, Geo Pertea, Ales Varabyou, Florian P. Breitwieser, Yu-Chi Chang, Anil K. Madugundu, Akhilesh Pandey, Steven L. Salzberg - Genome biology 2018 cited by 370
- Cloning of a receptor subunit required for signaling by thymic stromal lymphopoietin
Authors: Akhilesh Pandey, Katsutoshi Ozaki, Heinz Baumann, Steven D. Levin, Anne Puel, Andrew G. Farr, Steven F. Ziegler, Warren J. Leonard, Harvey F. Lodish - Nature Immunology 2000 cited by 450
- A network map of IL-33 signaling pathway
Authors: Sneha M. Pinto, Yashwanth Subbannayya, D. A. B. Rex, Rajesh Raju, Oishi Chatterjee, Jayshree Advani, Aneesha Radhakrishnan, Thottethodi Subrahmanya Keshava Prasad, Mohan R. Wani, Akhilesh Pandey - Journal of Cell Communication and Signaling 2018 cited by 144
- Analysis of Proteins and Proteomes by Mass Spectrometry
Authors: Matthias Mann, Ronald C. Hendrickson, Akhilesh Pandey - Annual Review of Biochemistry 2001 cited by 1,229
- The BioPAX community standard for pathway data sharing
Authors: Emek Demir, Michael P. Cary, Suzanne Paley, Ken Fukuda, Christian Lemer, Imre Västrik, Guanming Wu, Peter D’Eustachio, Carl F. Schaefer, Joanne Luciano, Frank Schacherer, Irma Martínez‐Flores, Zhenjun Hu, Verónica Jiménez‐Jacinto, Joshi-Tope Geeta, Kumaran Kandasamy, Alejandra López-Fuentes, Huaiyu Mi, Elgar Pichler, Igor Rodchenkov, Andrea Splendiani, Sasha Tkachev, Jeremy Zucker, Gopal Gopinath, Harsha Rajasimha, Ranjani Ramakrishnan, Imran Shah, Mustafa Syed, Nadia Anwar, Özgün Babur, Michael L. Blinov, Erik Brauner, Dan Corwin, Sylva L. Donaldson, Frank Gibbons, Robert N. Goldberg, Peter Hornbeck, Augustin Luna, Peter Murray‐Rust, Eric Neumann, Oliver Ruebenacker, Matthias Samwald, Martijn van Iersel, Sarala Wimalaratne, K.W. Allen, Burk Braun, Michelle Whirl‐Carrillo, Kei-Hoi Cheung, Kam D Dahlquist, Andrew Finney, Marc Gillespie, Elizabeth M. Glass, Li Gong, Robin Haw, Michael Honig, Olivier Hubaut, David W. Kane, Shiva Krupa, Martina Kutmon, Julie Mosty Leonard, Debbie Marks, David Merberg, Victoria Petri, Alexander R. Pico, Dean Ravenscroft, Liya Ren, Nigam H. Shah, Margot Sunshine, Rebecca Tang, Ryan Whaley, Stan Letovksy, Kenneth H. Buetow, Andrey Rzhetsky, Vincent Schächter, Bruno S Sobral, Uğur Doğrusöz, Shannon K. McWeeney, Mirit I. Aladjem, Ewan Birney, Julio Collado‐Vides, Susumu Goto, Michael Hucka, Nicolas Le Novère, Natalia Maltsev, Akhilesh Pandey, Paul D. Thomas, Edgar Wingender, Peter D. Karp, Chris Sander, Gary D. Bader - Nature Biotechnology 2010 cited by 756
- Development of Human Protein Reference Database as an Initial Platform for Approaching Systems Biology in Humans
Authors: Suraj Peri, J. Daniel Navarro, Ramars Amanchy, Troels Zakarias Kristiansen, Chandra Kiran Jonnalagadda, Vineeth Surendranath, Vidya Niranjan, Babylakshmi Muthusamy, T. K. B. Gandhi, Mads Grønborg, Nieves Ibarrola, Nandan Deshpande, K. Shanker, H N Shivashankar, B.P. Rashmi, Mummadireddy Ramya, Zhixing Zhao, K.N. Chandrika, Nambisan Padma, H.C. Harsha, A.J. Yatish, M. Kavitha, Minal Menezes, Dipanwita Roy Choudhury, Shubha Suresh, Neelanjana Ghosh, R. Saravana, Sreenath Chandran, Subhalakshmi Krishna, Mary T. Joy, Sanjeev K. Anand, V. Madavan, Ansamma Joseph, G. William Wong, William P. Schiemann, Stefan N. Constantinescu, Lily Huang, Roya Khosravi‐Far, Hanno Steen, Muneesh Tewari, Saghi Ghaffari, Gerard C. Blobe, Chi V. Dang, Joe G. N. Garcia, Jonathan Pevsner, Ole N. Jensen, Peter Roepstorff, K. S. Deshpande, Arul M. Chinnaiyan, Ada Hamosh, Aravinda Chakravarti, Akhilesh Pandey - Genome Research 2003 cited by 1,111
- GCN5 acetyltransferase complex controls glucose metabolism through transcriptional repression of PGC-1α
Authors: Carles Lerín, Joseph T. Rodgers, Dário Eluan Kalume, Seung-Hee Kim, Akhilesh Pandey, Pere Puigserver - Cell Metabolism 2006 cited by 433
- A pathway map of glutamate metabolism
Authors: Soujanya D. Yelamanchi, Savita Jayaram, Joji Kurian Thomas, Seetaramanjaneyulu Gundimeda, Aafaque Ahmad Khan, Anish Singhal, Thottethodi Subrahmanya Keshava Prasad, Akhilesh Pandey, Babu Lal Somani, Harsha Gowda - Journal of Cell Communication and Signaling 2015 cited by 183
