Guanming Wu
Active 1994–2025
- 62
- Papers
- 29,563
- Citations
- 35
- h-index
- 56
- i10-index
Citations
Citation sources
Countries
Institutions
- Harvard University0.9%
- Inserm0.6%
- European Bioinformatics Institute0.6%
- Broad Institute0.5%
- Centre National de la Recherche Scientifique0.5%
- University of Oxford0.5%
- Other96.4%
Fields
- Biochemistry, Genetics and Molecular Biology59.5%
- Medicine23.2%
- Computer Science6.7%
- Immunology and Microbiology2.9%
- Neuroscience2.1%
- Agricultural and Biological Sciences1.5%
- Other4.1%
Topics
- Bioinformatics and Genomic Networks10.4%
- Computational Drug Discovery Methods3.7%
- Gene expression and cancer classification3.4%
- Biomedical Text Mining and Ontologies2.6%
- Gene Regulatory Network Analysis2.5%
- Genetic Associations and Epidemiology2.3%
- Other75.1%
Coauthors
- Lincoln Stein25
- Peter D’Eustachio21
- Lisa Matthews17
- Marc Gillespie17
- Robin Haw16
- Bijay Jassal15
- Henning Hermjakob14
- Bruce May12
- Joel Weiser11
- Karen Rothfels11
- Veronica Shamovsky11
- M Orlic-Milacic10
- David Croft9
- Shannon K. McWeeney8
- Antonio Fabregat7
- Chuqiao Gong7
- Cristoffer Sevilla7
- Esther Schmidt7
- Ewan Birney7
- Eliot Ragueneau6
- Gopal Gopinath6
- Imre Vastrik6
- Konstantinos Sidiropoulos6
- Ralf Stephan6
All papers
- The reactome pathway knowledgebase 2022
Authors: Marc Gillespie, Bijay Jassal, Ralf Stephan, M Orlic-Milacic, Karen Rothfels, Andrea Senff‐Ribeiro, Johannes Griss, Cristoffer Sevilla, Lisa Matthews, Chuqiao Gong, Chuan Deng, Thawfeek Varusai, Eliot Ragueneau, Yusra Haider, Bruce May, Veronica Shamovsky, Joel Weiser, Timothy Brunson, Nasim Sanati, Liam Beckman, Xiang Shao, Antonio Fabregat, Konstantinos Sidiropoulos, Julieth Murillo, Guilherme Viteri, Justin Cook, Solomon I. Shorser, Gary D. Bader, Emek Demir, Chris Sander, Robin Haw, Guanming Wu, Lincoln Stein, Henning Hermjakob, Peter D’Eustachio - Nucleic Acids Research, Nucleic Acids Res. 2021 cited by 2,542
- The Reactome Pathway Knowledgebase 2024
Authors: M Orlic-Milacic, Deidre Beavers, Patrick Conley, Chuqiao Gong, Marc Gillespie, Johannes Griss, Robin Haw, Bijay Jassal, Lisa Matthews, Bruce May, Robert Petryszak, Eliot Ragueneau, Karen Rothfels, Cristoffer Sevilla, Veronica Shamovsky, Ralf Stephan, Krishna Kumar Tiwari, Thawfeek Varusai, Joel Weiser, A. Jordan Wright, Guanming Wu, Lincoln Stein, Henning Hermjakob, Peter D’Eustachio - Nucleic Acids Research 2023 cited by 1,339
- The Reactome pathway Knowledgebase
Authors: Antonio Fabregat, Konstantinos Sidiropoulos, Phani Garapati, Marc Gillespie, Kerstin Hausmann, Robin Haw, Bijay Jassal, S Jupe, Florian Korninger, Sheldon McKay, Lisa Matthews, Bruce May, M Orlic-Milacic, Karen Rothfels, Veronica Shamovsky, Marissa Webber, Joel Weiser, Mark Williams, Guanming Wu, Lincoln Stein, Henning Hermjakob, Peter D’Eustachio - Nucleic Acids Research, Nucleic Acids Res. 2015 cited by 6,014
- The reactome pathway knowledgebase
Authors: Bijay Jassal, Lisa Matthews, Guilherme Viteri, Chuqiao Gong, Pascual Lorente, Antonio Fabregat, Konstantinos Sidiropoulos, Justin Cook, Marc Gillespie, Robin Haw, Fred Loney, Bruce May, M Orlic-Milacic, Karen Rothfels, Cristoffer Sevilla, Veronica Shamovsky, Solomon I. Shorser, Thawfeek Varusai, Joel Weiser, Guanming Wu, Lincoln Stein, Henning Hermjakob, Peter D’Eustachio - Nucleic Acids Research, Nucleic Acids Res. 2019 cited by 2,363
- The Reactome Pathway Knowledgebase
Authors: Antonio Fabregat, Steven Jupe, Lisa Matthews, Konstantinos Sidiropoulos, Marc Gillespie, Phani Garapati, Robin Haw, Bijay Jassal, Florian Korninger, Bruce May, M Orlic-Milacic, Corina Duenas Roca, Karen Rothfels, Cristoffer Sevilla, Veronica Shamovsky, Solomon I. Shorser, Thawfeek Varusai, Guilherme Viteri, Joel Weiser, Guanming Wu, Lincoln Stein, Henning Hermjakob, Peter D’Eustachio - Nucleic Acids Research, Nucleic Acids Res. 2017 cited by 3,172
- Integrative analysis of drug response and clinical outcome in acute myeloid leukemia
Authors: Daniel Bottomly, Nicola Long, Anna Reister Schultz, Stephen E. Kurtz, Cristina E. Tognon, Kara Johnson, Melissa L. Abel, Anupriya Agarwal, Sammantha Avaylon, Erik Benton, Aurora Blucher, Uma Borate, Theodore P. Braun, Jordana Brown, Jade Bryant, Russell T. Burke, Amy Carlos, Bill H. Chang, Hyun Cho, Stephen Christy, Cody Coblentz, Aaron Cohen, Amanda d’Almeida, Rachel J. Cook, Alexey V. Danilov, Kim‐Hien T. Dao, Michie Degnin, James Dibb, Christopher A. Eide, Isabel A. English, Stuart Hagler, Heath Harrelson, Rachel Henson, Hibery Ho, Sunil K. Joshi, Brian Junio, Andy Kaempf, Yoko Kosaka, Ted Laderas, Matt Lawhead, Hyun-Jung Lee, Jessica Leonard, Chenwei Lin, Evan Lind, Selina Qiuying Liu, Pierrette Lo, Marc Loriaux, Samuel B. Luty, Julia E. Maxson, Tara A. Macey, Jacqueline Martinez, Jessica Minnier, Andrea Monteblanco, Motomi Mori, Quinlan Morrow, Dylan Nelson, Justin Ramsdill, Angela Rofelty, Alexandra Rogers, Kyle A. Romine, Peter Ryabinin, Jennifer N. Saultz, David A. Sampson, Samantha L. Savage, Robert Schuff, Robert P. Searles, Rebecca L. Smith, Stephen E. Spurgeon, Tyler Sweeney, Ronan Swords, Aashis Thapa, Karina Thiel-Klare, Elie Traer, Jake Wagner, Beth Wilmot, Joelle Wolf, Guanming Wu, Amy Yates, Haijiao Zhang, Christopher R. Cogle, Robert H. Collins, Michael W. Deininger, Christopher S. Hourigan, Craig T. Jordan, Tara L. Lin, Micaela Martínez, Rachel R. Pallapati, Daniel A. Pollyea, Anthony D. Pomicter, Justin M. Watts, Scott J. Weir, Brian Druker, Shannon K. McWeeney, Jeffrey Tyner - Cancer Cell 2022 cited by 368
- Reactome: a database of reactions, pathways and biological processes
Authors: David Croft, Gavin O'Kelly, Guanming Wu, Robin Haw, Marc Gillespie, Lisa Matthews, Michael Caudy, Phani V. Garapati, Gopal Gopinath, Bijay Jassal, Steven Jupe, Irina Kalatskaya, Shahana Mahajan, Bruce May, Nelson Ndegwa, Esther Schmidt, Veronica Shamovsky, Christina K. Yung, Ewan Birney, Henning Hermjakob, Peter D'Eustachio, Lincoln Stein - Nucleic Acids Research, Nucleic Acids Res. 2010 cited by 1,799
- The Reactome pathway knowledgebase
Authors: David Croft, Antonio Fabregat Mundo, Robin Haw, M Orlic-Milacic, Joel Weiser, Guanming Wu, Michael Caudy, Phani Garapati, Marc Gillespie, Maulik R. Kamdar, Bijay Jassal, Steven Jupe, Lisa Matthews, Bruce May, Stanislav Palatnik, Karen Rothfels, Veronica Shamovsky, Heeyeon Song, Mark Williams, Ewan Birney, Henning Hermjakob, Lincoln Stein, Peter D’Eustachio - Nucleic Acids Research, Nucleic Acids Res. 2013 cited by 1,957
- Twelve type 2 diabetes susceptibility loci identified through large-scale association analysis
Authors: The MAGIC investigators, Benjamin F. Voight, Laura J. Scott, Valgerður Steinthórsdóttir, Andrew P. Morris, Christian Dina, Ryan Welch, Eleftheria Zeggini, Cornelia Huth, Yurii S. Aulchenko, Guðmar Þorleifsson, Laura McCulloch, Teresa Ferreira, Harald Grallert, Najaf Amin, Guanming Wu, Cristen J. Willer, Soumya Raychaudhuri, Steve McCarroll, Claudia Langenberg, Oliver Hofmann, Josée Dupuis, Lu Qi, Ayellet V. Segrè, Mandy van Hoek, Pau Navarro, Kristin Ardlie, Beverley Balkau, Rafn Benediktsson, Amanda J. Bennett, Roza Blagieva, Eric Boerwinkle, Lori L. Bonnycastle, Kristina Bengtsson Boström, Bert Bravenboer, Suzannah Bumpstead, Noisël P Burtt, G. Charpentier, Peter S. Chines, Marilyn C. Cornelis, David Couper, Gabe Crawford, Alex S. F. Doney, Katherine S. Elliott, Amanda L. Elliott, Michael R. Erdos, Caroline S. Fox, Christopher S. Franklin, Martha Ganser, Christian Gieger, Niels Grarup, Todd J. Green, Simon J. Griffin, Christopher J. Groves, Candace Guiducci, Samy Hadjadj, Neelam Hassanali, Christian Herder, Bo Isomaa, Anne Jackson, Paul R V Johnson, Torben Jørgensen, Wen H. Kao, Norman Klopp, Augustine Kong, Peter Kraft, Johanna Kuusisto, Torsten Lauritzen, Man Li, Aloysius G. Lieverse, Cecilia M. Lindgren, Valeriya Lyssenko, Michel Marre, Thomas Meitinger, Kristian Midthjell, Mario A. Morken, Narisu Narisu, Peter M. Nilsson, Katharine R. Owen, Felicity Payne, John R. B. Perry, Ann-Kristin Petersen, Carl G. P. Platou, Christine Proença, Inga Prokopenko, Wolfgang Rathmann, Nigel W. Rayner, Neil R. Robertson, Ghislain Rocheleau, Michael Roden, Michael Sampson, Richa Saxena, Beverley M. Shields, Peter Shrader, Gunnar Sigurðsson, Thomas Sparsø, Klaus Straßburger, Heather M. Stringham, Qi Sun, Amy J. Swift and 59 more - Nature Genetics 2010 cited by 1,797
- Reactome graph database: Efficient access to complex pathway data
Authors: Antonio Fabregat, Florian Korninger, Guilherme Viteri, Konstantinos Sidiropoulos, Pablo Marín-García, Peipei Ping, Guanming Wu, Lincoln Stein, Peter D'Eustachio, Henning Hermjakob - PLoS Computational Biology, PLoS Comput. Biol. 2018 cited by 289
- A human functional protein interaction network and its application to cancer data analysis
Authors: Guanming Wu, Xin Feng, Lincoln Stein - Genome biology 2010 cited by 720
- The Systems Biology Graphical Notation
Authors: Nicolas Le Novère, Michael Hucka, Huaiyu Mi, Stuart Moodie, Falk Schreiber, Anatoly Sorokin, Emek Demir, Katja Wegner, Mirit I. Aladjem, Sarala Wimalaratne, Frank T Bergman, Ralph Gauges, Peter Ghazal, Hideya Kawaji, Lu Li, Yukiko Matsuoka, Alice Villéger, Sarah E Boyd, Laurence Calzone, Mélanie Courtot, Uğur Doğrusöz, Tom C. Freeman, Akira Funahashi, Samik Ghosh, Akiya Jouraku, Sohyoung Kim, Fedor Kolpakov, Augustin Luna, Sven Sahle, Esther Schmidt, Steven Watterson, Guanming Wu, Igor Goryanin, Douglas B. Kell, Chris Sander, Herbert M. Sauro, Jacky L. Snoep, Kurt W. Kohn, Hiroaki Kitano - Nature Biotechnology 2009 cited by 947
- Identification of a Therapeutic Strategy Targeting Amplified FGF19 in Liver Cancer by Oncogenomic Screening
Authors: Eric T. Sawey, Maïa Chanrion, Chunlin Cai, Guanming Wu, Jianping Zhang, Lars Zender, Alice Zhao, Ronald W. Busuttil, Herman Yee, Lincoln Stein, Dorothy French, Richard S. Finn, Scott W. Lowe, Scott Powers - Cancer Cell 2011 cited by 433
- Clonal hematopoiesis related TET2 loss-of-function impedes IL1β-mediated epigenetic reprogramming in hematopoietic stem and progenitor cells
Authors: John McClatchy, Ruslan Strogantsev, Emily R. Wolfe, Hong Lin, Majid Mohammadhosseini, Brett A. Davis, Christopher Eden, Daniel Goldman, Will Fleming, Pamela B. Conley, Guanming Wu, Luisa Cimmino, Hisham Mohammed, Anupriya Agarwal - Nature Communications 2023 cited by 65
- The BioPAX community standard for pathway data sharing
Authors: Emek Demir, Michael P. Cary, Suzanne Paley, Ken Fukuda, Christian Lemer, Imre Västrik, Guanming Wu, Peter D’Eustachio, Carl F. Schaefer, Joanne Luciano, Frank Schacherer, Irma Martínez‐Flores, Zhenjun Hu, Verónica Jiménez‐Jacinto, Joshi-Tope Geeta, Kumaran Kandasamy, Alejandra López-Fuentes, Huaiyu Mi, Elgar Pichler, Igor Rodchenkov, Andrea Splendiani, Sasha Tkachev, Jeremy Zucker, Gopal Gopinath, Harsha Rajasimha, Ranjani Ramakrishnan, Imran Shah, Mustafa Syed, Nadia Anwar, Özgün Babur, Michael L. Blinov, Erik Brauner, Dan Corwin, Sylva L. Donaldson, Frank Gibbons, Robert N. Goldberg, Peter Hornbeck, Augustin Luna, Peter Murray‐Rust, Eric Neumann, Oliver Ruebenacker, Matthias Samwald, Martijn van Iersel, Sarala Wimalaratne, K.W. Allen, Burk Braun, Michelle Whirl‐Carrillo, Kei-Hoi Cheung, Kam D Dahlquist, Andrew Finney, Marc Gillespie, Elizabeth M. Glass, Li Gong, Robin Haw, Michael Honig, Olivier Hubaut, David W. Kane, Shiva Krupa, Martina Kutmon, Julie Mosty Leonard, Debbie Marks, David Merberg, Victoria Petri, Alexander R. Pico, Dean Ravenscroft, Liya Ren, Nigam H. Shah, Margot Sunshine, Rebecca Tang, Ryan Whaley, Stan Letovksy, Kenneth H. Buetow, Andrey Rzhetsky, Vincent Schächter, Bruno S Sobral, Uğur Doğrusöz, Shannon K. McWeeney, Mirit I. Aladjem, Ewan Birney, Julio Collado‐Vides, Susumu Goto, Michael Hucka, Nicolas Le Novère, Natalia Maltsev, Akhilesh Pandey, Paul D. Thomas, Edgar Wingender, Peter D. Karp, Chris Sander, Gary D. Bader - Nature Biotechnology 2010 cited by 756
- Pathway and network analysis of cancer genomes
Authors: Rune Linding, Pau Creixell, Jüri Reimand, Gary D. Bader, Lincoln Stein, B. F. Francis Ouellette, Paul C. Boutros, Syed Haider, Guanming Wu, Guanming Wu, Tatsuhiro Shibata, Alfonso Valencia, Miguél Vázquez, Ville Mustonen, Núria López-Bigas, Abel González-Pérez, John V. Pearson, Chris Sander, Benjamin J. Raphael, Debora S. Marks - Nature Methods 2015 cited by 358
- Functional Interaction Network Construction and Analysis for Disease Discovery
Authors: Guanming Wu, Robin Haw - Methods in molecular biology 2017 cited by 169
- COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms
Authors: Marek Ostaszewski, Anna Niarakis, Alexander Mazein, Inna Kuperstein, Robert D. Phair, Aurelio Orta‐Resendiz, Vidisha Singh, Sara Sadat Aghamiri, Márcio Luís Acencio, Enrico Glaab, Andreas Ruepp, Gisela Fobo, Corinna Montrone, Barbara Brauner, Goar Frishman, Luis Cristóbal Monraz Gómez, Julia Somers, Matti Hoch, Shailendra K. Gupta, Julia Scheel, Hanna Borlinghaus, Tobias Czauderna, Falk Schreiber, Arnau Montagud, Miguel Ponce-de-León, Akira Funahashi, Yusuke Hiki, Noriko Hiroi, Takahiro Yamada, Andreas Dräger, Alina Renz, Muhammad Naveez, Zsolt Böcskei, Francesco Messina, Daniela Börnigen, Liam Fergusson, Marta Zaffira Conti, Marius Rameil, Vanessa Nakonecnij, Jakob Vanhoefer, Leonard Schmiester, Muying Wang, Emily E. Ackerman, Jason E. Shoemaker, Jeremy Zucker, Kristie Oxford, Jeremy Teuton, Ebru Kocakaya, Gökçe Yağmur Summak, Kristina Hanspers, Martina Kutmon, Susan L. Coort, Lars Eijssen, Friederike Ehrhart, Rex Devasahayam Arokia Balaya, Denise Slenter, Marvin Martens, Nhung Pham, Robin Haw, Bijay Jassal, Lisa Matthews, M Orlic-Milacic, Andrea Senff‐Ribeiro, Karen Rothfels, Veronica Shamovsky, Ralf Stephan, Cristoffer Sevilla, Thawfeek Varusai, Jean‐Marie Ravel, Rupsha Fraser, Vera Ortseifen, Silvia Marchesi, Piotr Gawron, Ewa Smula, Laurent Heirendt, Venkata Satagopam, Guanming Wu, Anders Riutta, Martin Golebiewski, Stuart Owen, Carole Goble, Xiaoming Hu, Rupert W. Overall, Dieter Maier, Angela Bauch, Benjamin M. Gyori, John A. Bachman, Carlos Vega, Valentin Grouès, Miguél Vázquez, Pablo Porras, Luana Licata, Marta Iannuccelli, Francesca Sacco, Anastasia Nesterova, Anton Yuryev, Anita de Waard, Dénes Türei, Augustin Luna, Özgün Babur and 40 more - Molecular Systems Biology 2021 cited by 111
- Reactome: a knowledge base of biologic pathways and processes
Authors: Imre Västrik, Peter D’Eustachio, Esther Schmidt, Joshi-Tope Geeta, Gopal Gopinath, David Croft, Bernard de Bono, Marc Gillespie, Bijay Jassal, Suzanna Lewis, Lisa Matthews, Guanming Wu, Ewan Birney, Lincoln Stein - Genome biology 2007 cited by 661
- Integrative Analysis of Drug Response and Clinical Outcome in Acute Myeloid Leukemia
Authors: Daniel Bottomly, Nicola Long, Anna Reister Schultz, Stephen E. Kurtz, Cristina E. Tognon, Kara Johnson, Melissa L. Abel, Anupriya Agarwal, Sammantha Avaylan, Erik Benton, Aurora Blucher, Uma Borate, Theodore P. Braun, Jordana Brown, Jade Bryant, Russell L. Burke, Amy Carlos, Bill H. Chang, Hyun Cho, Stephen Christy, Cody Coblentz, Aaron Cohen, Amanda d’Almeida, Rachel C. Cook, Alexey V. Danilov, Kim‐Hien T. Dao, Michie Degnin, James Dibb, Christopher A. Eide, Isabel A. English, Stuart Hagler, Heath Harrelson, Rachel Henson, Hibery Ho, Sunil Joshi, Brian Junio, Andy Kaempf, Yoko Kosaka, Ted Laderas, Matt Lawhead, Hyun-Jung Lee, Jessica Leonard, Chenwei Lin, Evan Lind, Selina Qiuying Liu, Pierrette Lo, Marc Loriaux, Samuel B. Luty, Julia E. Maxson, Tara A. Macey, Jacqueline Martinez, Jessica Minnier, Andrea Monteblanco, Motomi Mori, Quinlan Morrow, Dylan Nelson, Justin Ramsdill, Angela Rofelty, Alexandra Rogers, Peter Ryabinin, Jennifer N. Saultz, David A. Sampson, Samantha L. Savage, Robert Schuff, Robert P. Searles, Rebecca Smith, Stephen E. Spurgeon, Tyler Sweeney, Ronan Swords, Aashis Thapa, Karina Thiel-Klare, Elie Traer, Jake Wagner, Beth Wilmot, Joelle Wolf, Guanming Wu, Amy Yates, Haijiao Zhang, Christopher R. Cogle, Robert H. Collins, Michael W. Deininger, Christopher S. Hourigan, Craig T. Jordan, Tara L. Lin, Micaela Martínez, Rachel R. Pallapati, Daniel A. Pollyea, Tony Pomicter, Justin M. Watts, Scott J. Weir, Brian Druker, Shannon K. McWeeney, Jeffrey Tyner - 2022 cited by 32
- ChatGPT usage in the Reactome curation process
Authors: Krishna Kumar Tiwari, Lisa Matthews, Bruce May, Veronica Shamovsky, M Orlic-Milacic, Karen Rothfels, Eliot Ragueneau, Chuqiao Gong, Ralf Stephan, Nancy T. Li, Guanming Wu, Lincoln Stein, Peter D’Eustachio, Henning Hermjakob - 2023 cited by 13
- Reactome knowledgebase of human biological pathways and processes
Authors: Lisa Matthews, Gopal Gopinath, Marc Gillespie, Michael Caudy, David Croft, Bernard de Bono, Phani V. Garapati, Jill Hemish, Henning Hermjakob, Bijay Jassal, Alexander Kanapin, Suzanna Lewis, Shahana Mahajan, Bruce May, Esther Schmidt, Imre Vastrik, Guanming Wu, Ewan Birney, Lincoln Stein, Peter D'Eustachio - Nucleic Acids Research, Nucleic Acids Res. 2008 cited by 886
- ReactomeFIViz: a Cytoscape app for pathway and network-based data analysis
Authors: Guanming Wu, Eric T. Dawson, Adrian Duong, Robin Haw, Lincoln Stein - F1000Research 2014 cited by 233
- Using the Reactome Database
Authors: Karen Rothfels, M Orlic-Milacic, Lisa Matthews, Robin Haw, Cristoffer Sevilla, Marc Gillespie, Ralf Stephan, Chuqiao Gong, Eliot Ragueneau, Bruce May, Veronica Shamovsky, A. Jordan Wright, Joel Weiser, Deidre Beavers, Patrick Conley, Krishna Kumar Tiwari, Bijay Jassal, Johannes Griss, Andrea Senff‐Ribeiro, Timothy Brunson, Robert Petryszak, Henning Hermjakob, Peter D’Eustachio, Guanming Wu, Lincoln Stein - Current Protocols 2023 cited by 56
