Ali Naji
Active 1981–2025
- Also published as
- ALI NAJI
- 123
- Papers
- 18,665
- Citations
- 81
- h-index
- 118
- i10-index
Citations
Citation sources
Countries
Institutions
- University of Pennsylvania1.5%
- Harvard University1.4%
- Inserm0.7%
- Massachusetts General Hospital0.6%
- University of Michigan0.6%
- National Institutes of Health0.5%
- Other94.7%
Fields
- Medicine51.4%
- Biochemistry, Genetics and Molecular Biology26%
- Immunology and Microbiology18.3%
- Neuroscience0.9%
- Engineering0.7%
- Computer Science0.5%
- Other2.2%
Topics
- Pancreatic function and diabetes10.9%
- Diabetes and associated disorders7.3%
- T-cell and B-cell Immunology6.3%
- Immune Cell Function and Interaction6.1%
- Diabetes Management and Research4.4%
- Immunotherapy and Immune Responses3.4%
- Other61.6%
Coauthors
- Chengyang Liu41
- Clyde F. Barker23
- Klaus H. Kaestner22
- James F. Markmann19
- Michael R. Rickels12
- Jonathan Schug11
- Susan Rostami10
- Franz M. Matschinsky8
- Golnaz Vahedi8
- Hooman Noorchashm8
- Michael R. Betts8
- Ming Yu8
- Shaoping Deng8
- Yue J. Wang8
- Alberto Sada Japp7
- Alvin C. Powers7
- Brigitte Koeberlein7
- Mark A. Atkinson7
- Nicolai M. Doliba7
- Bryan A. Wolf6
- Divyansh Agarwal6
- Eline T. Luning Prak6
- Ergun Velidedeoğlu6
- José Oberholzer6
All papers
- Discovery of 318 new risk loci for type 2 diabetes and related vascular outcomes among 1.4 million participants in a multi-ancestry meta-analysis
Authors: Marijana Vujković, Jacob M. Keaton, Julie A. Lynch, Donald R. Miller, Jin Zhou, Catherine Tcheandjieu, Jennifer E. Huffman, Themistocles L. Assimes, Kimberly Lorenz, Xiang Zhu, Austin T. Hilliard, Renae Judy, Jie Huang, Kyung Min Lee, Derek Klarin, Saiju Pyarajan, John Danesh, Olle Melander, Asif Rasheed, Nadeem Hayat Mallick, Shahid Hameed, Irshad Hussain Qureshi, Muhammad Afzal, Uzma Malik, Anjum Jalal, Shahid Abbas, Xin Sheng, Long Gao, Klaus H. Kaestner, Katalin Suszták, Yan V. Sun, Scott L. DuVall, Kelly Cho, Jennifer S. Lee, J. Michael Gaziano, Lawrence S. Phillips, James B. Meigs, Peter D. Reaven, Peter W.F. Wilson, Todd L. Edwards, Daniel J. Rader, Scott M. Damrauer, Christopher J. O’Donnell, Philip S. Tsao, Mark A. Atkinson, Al C. Powers, Ali Naji, Klaus H. Kaestner, Gonçalo R. Abecasis, Aris Baras, Michael Cantor, Giovanni Coppola, Aris N. Economides, Luca A. Lotta, John D. Overton, Jeffrey G. Reid, Alan R. Shuldiner, Christina Beechert, Caitlin Forsythe, Erin D. Fuller, Zhenhua Gu, Michael Lattari, Alexander Lopez, Thomas D. Schleicher, Maria Sotiropoulos Padilla, Karina Toledo, Louis Widom, Sarah E. Wolf, Manasi Pradhan, Kia Manoochehri, Ricardo H. Ulloa, Xiaodong Bai, Suganthi Balasubramanian, Leland Barnard, Andrew Blumenfeld, Gisu Eom, Lukas Habegger, Alicia Hawes, Shareef Khalid, Evan K. Maxwell, William Salerno, Jeffrey Staples, Ashish Yadav, Marcus B. Jones, Lyndon J. Mitnaul, VA Million Veteran Program, Samuel M. Aguayo, Sunil K. Ahuja, Zuhair K. Ballas, Sujata Bhushan, Edward J. Boyko, David Cohen, John Concato, Joseph I. Constans, Louis J. Dell’Italia, Joseph Fayad, Ronald Fernando, Hermes Flórez, Melinda A. Gaddy, Saib Gappy and 82 more - Nature Genetics 2020 cited by 801
- Single-cell multi-omics analysis of human pancreatic islets reveals novel cellular states in type 1 diabetes
Authors: Maria Fasolino, Gregory W. Schwartz, Abhijeet R. Patil, Aanchal Mongia, Maria L. Golson, Yue J. Wang, Ashleigh Morgan, Chengyang Liu, Jonathan Schug, Jinping Liu, Minghui Wu, Daniel Traum, Ayano Kondo, Catherine Lee May, Naomi Goldman, Wenliang Wang, Michael D. Feldman, Jason H. Moore, Alberto Sada Japp, Michael R. Betts, Maria Fasolino, Gregory W. Schwartz, Abhijeet R. Patil, Aanchal Mongia, Maria L. Golson, Yue J. Wang, Ashleigh Morgan, Chengyang Liu, Jonathan Schug, Jinping Liu, Minghui Wu, Daniel Traum, Ayano Kondo, Catherine Lee May, Naomi Goldman, Wenliang Wang, Michael D. Feldman, Jason H. Moore, Alberto Sada Japp, Michael R. Betts, Robert B. Faryabi, Ali Naji, Klaus H. Kaestner, Golnaz Vahedi, Robert B. Faryabi, Ali Naji, Klaus H. Kaestner, Golnaz Vahedi - Nature Metabolism 2022 cited by 201
- Phase 3 Trial of Transplantation of Human Islets in Type 1 Diabetes Complicated by Severe Hypoglycemia
Authors: Bernhard J. Hering, William R. Clarke, Nancy D. Bridges, Thomas L. Eggerman, Rodolfo Alejandro, Melena D. Bellin, Kathryn Chaloner, Christine W. Czarniecki, Julia Goldstein, Lawrence G. Hunsicker, Dixon B. Kaufman, Olle Korsgren, Christian P. Larsen, Xunrong Luo, James F. Markmann, Ali Naji, José Oberholzer, Andrew M. Posselt, Michael R. Rickels, Camillo Ricordi, Mark A. Robien, Peter Senior, A. M. James Shapiro, Peter G. Stock, Nicole A. Turgeon - Diabetes Care 2016 cited by 635
- Single-Cell Transcriptomics of the Human Endocrine Pancreas
Authors: Yue J. Wang, Jonathan Schug, Kyoung‐Jae Won, Chengyang Liu, Ali Naji, Dana Avrahami, Maria L. Golson, Klaus H. Kaestner - Diabetes 2016 cited by 480
- NIH Initiative to Improve Understanding of the Pancreas, Islet, and Autoimmunity in Type 1 Diabetes: The Human Pancreas Analysis Program (HPAP)
Authors: Klaus H. Kaestner, Alvin C. Powers, Ali Naji, Mark A. Atkinson - Diabetes 2019 cited by 179
- A beta cell subset with enhanced insulin secretion and glucose metabolism is reduced in type 2 diabetes
Authors: Alfonso Rubio‐Navarro, Nicolás Gómez-Banoy, Lisa Stoll, Friederike Dündar, Alex M. Mawla, Lunkun Ma, Èric Cortada, Paul Zumbo, Ang Li, Moritz Reiterer, Nathalia Montoya-Oviedo, Edwin A. Homan, Norihiro Imai, Ankit Gilani, Chengyang Liu, Ali Naji, Boris Yang, Angie Chi Nok Chong, David E. Cohen, Shuibing Chen, Jingli Cao, Geoffrey S. Pitt, Mark O. Huising, Doron Betel, James C. Lo - Nature Cell Biology 2023 cited by 71
- A nanofibrous encapsulation device for safe delivery of insulin-producing cells to treat type 1 diabetes
Authors: Xi Wang, Kristina G. Maxwell, Kai Wang, Daniel T. Bowers, James A. Flanders, Wanjun Liu, Long‐Hai Wang, Qingsheng Liu, Chengyang Liu, Ali Naji, Yong Wang, Bo Wang, Jing Chen, Alexander U. Ernst, Juan M. Melero‐Martin, Jeffrey R. Millman, Minglin Ma - Science Translational Medicine 2021 cited by 123
- Analysis of self-antigen specificity of islet-infiltrating T cells from human donors with type 1 diabetes
Authors: Jenny Aurielle B. Babon, Megan DeNicola, David M. Blodgett, Inne Crèvecoeur, Thomas Buttrick, René Maehr, Rita Bottino, Ali Naji, John S. Kaddis, Wassim Elyaman, Eddie A. James, Rachana Haliyur, Marcela Briššová, Lut Overbergh, Chantal Mathieu, Thomas Delong, Kathryn Haskins, Alberto Pugliese, Martha Campbell‐Thompson, Clayton E. Mathews, Mark A. Atkinson, Alvin C. Powers, David M. Harlan, Sally C. Kent - Nature Medicine 2016 cited by 294
- A Human Pluripotent Stem Cell-based Platform to Study SARS-CoV-2 Tropism and Model Virus Infection in Human Cells and Organoids
Authors: Liuliu Yang, Yuling Han, Benjamin E. Nilsson-Payant, Vikas Gupta, Pengfei Wang, Xiaohua Duan, Xuming Tang, Jiajun Zhu, Zeping Zhao, Fabrice Jaffré, Tuo Zhang, Tae Wan Kim, Oliver Harschnitz, David Redmond, Sean Houghton, Chengyang Liu, Ali Naji, Gabriele Ciceri, Sudha R. Guttikonda, Yaron Bram, Duc-Huy T. Nguyen, Michele Cioffi, Vasuretha Chandar, Daisy A. Hoagland, Yaoxing Huang, Jenny Xiang, Hui Wang, David Lyden, Alain Borczuk, Huanhuan Joyce Chen, Lorenz Studer, Fong Cheng Pan, David D. Ho, Benjamin R. tenOever, Todd Evans, Robert E. Schwartz, Shuibing Chen - Cell stem cell 2020 cited by 675
- The Transcription Factor T-bet Resolves Memory B Cell Subsets with Distinct Tissue Distributions and Antibody Specificities in Mice and Humans
Authors: John L. Johnson, Rebecca L. Rosenthal, James J. Knox, Arpita Myles, Martin S. Naradikian, Joanna Madej, Mariya Kostiv, Aaron M. Rosenfeld, Wenzhao Meng, Shannon Christensen, Scott E. Hensley, Jonathan W. Yewdell, David H. Canaday, Jinfang Zhu, Adrian B. McDermott, Yoav Dori, Max Itkin, E. John Wherry, Norbert Pardi, Drew Weissman, Ali Naji, Eline T. Luning Prak, Michael R. Betts, Michael P. Cancro - Immunity 2020 cited by 211
- Germinal center responses to SARS-CoV-2 mRNA vaccines in healthy and immunocompromised individuals
Authors: Katlyn Lederer, Emily Bettini, Kalpana Parvathaneni, Mark M. Painter, Divyansh Agarwal, Kendall A. Lundgreen, Madison E. Weirick, Kavitha Muralidharan, Diana Castaño, Rishi R. Goel, Xiao‐Ming Xu, Elizabeth M. Drapeau, Sigrid Gouma, Jordan T. Ort, Moses Awofolaju, Allison R. Greenplate, Carole Le Coz, Neil Romberg, Jennifer Trofe‐Clark, Gregory Malat, Lisa P. Jones, Mark Rosen, Daniela Weiskopf, Alessandro Sette, Behdad Besharatian, Mary Kaminiski, Scott E. Hensley, Paul Bates, E. John Wherry, Ali Naji, Vijay Bhoj, Michela Locci - Cell 2022 cited by 180
- Multiplexed In Situ Imaging Mass Cytometry Analysis of the Human Endocrine Pancreas and Immune System in Type 1 Diabetes
Authors: Yue J. Wang, Daniel Traum, Jonathan Schug, Long Gao, Chengyang Liu, Mark A. Atkinson, Alvin C. Powers, Michael D. Feldman, Ali Naji, Kyong‐Mi Chang, Klaus H. Kaestner - Cell Metabolism 2019 cited by 234
- Association between primary graft function and 5-year outcomes of islet allogeneic transplantation in type 1 diabetes: a retrospective, multicentre, observational cohort study in 1210 patients from the Collaborative Islet Transplant Registry
Authors: Mikaël Chetboun, Élodie Drumez, Cassandra Ballou, Mehdi Maanaoui, Elizabeth H. Payne, Franca B. Barton, Julie Kerr‐Conte, Marie‐Christine Vantyghem, Lorenzo Piemonti, Michael R. Rickels, Julien Labreuche, François Pattou, Rodolfo Alejandro, M Aull, Melena D. Bellin, Thierry Berney, D Borja-Cacho, Kenneth L. Brayman, Enrico Cagliero, Robert Caïazzo, Mark S. Cattral, Toby Coates, Kirstie K. Danielson, F. Defrance, E De Koning, Chintan Desai, Niraj M. Desai, A. Osama Gaber, Valéry Gmyr, Paul F. Gores, John A. Goss, P Gottllieb, Carla J. Greenbaum, Mark A. Hardy, David M. Harlan, Bernhard J. Hering, Fouad Kandeel, Dixon B. Kaufman, Thomas W. H. Kay, Bart Keymeulen, Khalid Khan, Yogish C. Kudva, Christian P. Larsen, Kristell Le Mapihan, G Levy, Marlon F. Levy, Thomas Loudovaris, Torbjörn Lundgren, Paola Maffi, James F. Markmann, W H Marks, Ali Naji, Philip J. O’Connell, José Oberholzer, Jon S. Odorico, Nicholas Onaca, François Pattou, Lorenzo Piemonti, Daniël Pipeleers, Andrew M. Posselt, Amer Rajab, Violeta Raverdy, Michael R. Rickels, Camillo Ricordi, A A Rossini, F Saudek, Beth Schrope, Antonio Secchi, Peter Senior, A. M. James Shapiro, James Shaw, Peter G. Stock, Diego Sánchez Thomas, Matthew Thompson, Marie‐Christine Vantyghem, L Vargas, H Wang, Anthony Wiseman, Piotr Witkowski, Kun‐Ho Yoon, Piotr Witkowski, Kun‐Ho Yoon - The Lancet Diabetes & Endocrinology 2023 cited by 61
- 836-P: Glucose-Dependent Insulin Production and Insulin-Independence in Type 1 Diabetes from Stem Cell–Derived, Fully Differentiated Islet Cells—Updated Data from the VX-880 Clinical Trial
Authors: Trevor Reichman, CAMILLO RICORDI, ALI NAJI, James F. Markmann, BRUCE A. PERKINS, Martin Wijkstrom, Steven Paraskevas, Bote G. Bruinsma, Gautham Marigowda, Judy L. Shih, Chenkun Wang, Douglas A. Melton, FELICIA PAGLIUCA, Bastiano Sanna, Leslie S. Kean, Anne L. Peters, PIOTR WITKOWSKI, Michael R. Rickels - Diabetes 2023 cited by 41
- SARS-CoV-2 infection induces beta cell transdifferentiation
Authors: Xuming Tang, Skyler Uhl, Tuo Zhang, Dongxiang Xue, Bo Li, J. Jeya Vandana, Joshua A. Acklin, Lori L. Bonnycastle, Narisu Narisu, Michael R. Erdos, Yaron Bram, Vasuretha Chandar, Angie Chi Nok Chong, Lauretta A. Lacko, Zaw Min, Jean K. Lim, Alain Borczuk, Jenny Xiang, Ali Naji, Francis S. Collins, Todd Evans, Chengyang Liu, Benjamin R. tenOever, Robert E. Schwartz, Shuibing Chen - Cell Metabolism 2021 cited by 194
- Elite control of HIV is associated with distinct functional and transcriptional signatures in lymphoid tissue CD8 + T cells
Authors: Son Nguyen, Claire Deléage, Samuel Darko, Amy Ransier, Duc P. Truong, Divyansh Agarwal, Alberto Sada Japp, Vincent H. Wu, Leticia Kuri-Cervantes, Mohamed Abdel‐Mohsen, Perla M. Del Río Estrada, Yuria Ablanedo‐Terrazas, Emma Gostick, James A. Hoxie, Nancy R. Zhang, Ali Naji, Gustavo Reyes‐Terán, Jacob D. Estes, David A. Price, Daniel C. Douek, Steven G. Deeks, Marcus Buggert, Michael R. Betts - Science Translational Medicine 2019 cited by 127
- Identification and characterization of HIV-specific resident memory CD8 + T cells in human lymphoid tissue
Authors: Marcus Buggert, Son Nguyen, Gonzalo Salgado-Montes de, Bertram Bengsch, Samuel Darko, Amy Ransier, Emily Roberts, Daniel Del Alcazar, Irene Bukh Brody, Laura A. Vella, Lalit K. Beura, Sathi Wijeyesinghe, Ramin S. Herati, Perla M. Del Río Estrada, Yuria Ablanedo‐Terrazas, Leticia Kuri-Cervantes, Alberto Sada Japp, Sasikanth Manne, Josephine R. Giles, Shant M. Vartanian, Austin P. Huffman, Johan K. Sandberg, Emma Gostick, G. Nadolski, Guido Silvestri, David H. Canaday, David A. Price, Constantinos Petrovas, Laura F. Su, Golnaz Vahedi, Yoav Dori, Ian Frank, Maxim Itkin, E. John Wherry, Steven G. Deeks, Ali Naji, Gustavo Reyes‐Terán, David Masopust, Daniel C. Douek, Michael R. Betts - Science Immunology 2018 cited by 167
- Tissue-specific exosome biomarkers for noninvasively monitoring immunologic rejection of transplanted tissue
Authors: Prashanth Vallabhajosyula, Laxminarayana Korutla, Andreas Habertheuer, Ming Yu, Susan Rostami, Chao‐Xing Yuan, Sanjana Reddy, Chengyang Liu, Varun Korutla, Brigitte Koeberlein, Jennifer Trofe‐Clark, Michael R. Rickels, Ali Naji - Journal of Clinical Investigation 2017 cited by 165
- Thymic selection of CD4+CD25+ regulatory T cells induced by an agonist self-peptide
Authors: Martha S. Jordan, Alina C. Boesteanu, Amy J. Reed, Andria L. Petrone, Andrea E. Holenbeck, Melissa A. Lerman, Ali Naji, Andrew J. Caton - Nature Immunology 2001 cited by 1,635
- Islet transplantation in the subcutaneous space achieves long-term euglycaemia in preclinical models of type 1 diabetes
Authors: Ming Yu, Divyansh Agarwal, Laxminarayana Korutla, Catherine Lee May, Wei Wang, Negin Noorchashm Griffith, Bernhard J. Hering, Klaus H. Kaestner, Omaida C. Velázquez, James F. Markmann, Prashanth Vallabhajosyula, Chengyang Liu, Ali Naji - Nature Metabolism 2020 cited by 109
- The Identity of Human Tissue-Emigrant CD8+ T Cells
Authors: Marcus Buggert, Laura A. Vella, Son Nguyen, Vincent H. Wu, Zeyu Chen, Takuya Sekine, André Perez‐Potti, Colby R. Maldini, Sasikanth Manne, Samuel Darko, Amy Ransier, Leticia Kuri-Cervantes, Alberto Sada Japp, Irene Bukh Brody, Martin A. Ivarsson, Jean‐Baptiste Gorin, Olga Rivera‐Ballesteros, Laura Hertwig, Jack P. Antel, Matthew E. Johnson, Afam A. Okoye, Louis J. Picker, Golnaz Vahedi, Ernesto Sparrelid, Sian Llewellyn‐Lacey, Emma Gostick, Johan K. Sandberg, Niklas K. Björkström, Amit Bar‐Or, Yoav Dori, Ali Naji, David H. Canaday, Terri M. Laufer, Andrew D. Wells, David A. Price, Ian Frank, Daniel C. Douek, E. John Wherry, Maxim Itkin, Michael R. Betts - Cell 2020 cited by 108
- 3D chromatin maps of the human pancreas reveal lineage-specific regulatory architecture of T2D risk
Authors: Chun Su, Long Gao, Catherine Lee May, James A. Pippin, Keith D. Boehm, Michelle Lee, Chengyang Liu, Matthew C. Pahl, Maria L. Golson, Ali Naji, Struan F.A. Grant, Andrew D. Wells, Klaus H. Kaestner - Cell Metabolism 2022 cited by 86
- Understanding islet dysfunction in type 2 diabetes through multidimensional pancreatic phenotyping: The Human Pancreas Analysis Program
Authors: Suzanne N. Shapira, Ali Naji, Mark A. Atkinson, Alvin C. Powers, Klaus H. Kaestner - Cell Metabolism 2022 cited by 72
- Single-cell transcriptomics of human islet ontogeny defines the molecular basis of β-cell dedifferentiation in T2D
Authors: Dana Avrahami, Yue J. Wang, Jonathan Schug, Eseye Feleke, Long Gao, Chengyang Liu, Ali Naji, Benjamin Gläser, Klaus H. Kaestner - Molecular Metabolism 2020 cited by 100
