Dawn Ciulla
Active 2011–2023
- 12
- Papers
- 21,394
- Citations
- 12
- h-index
- 12
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology61.5%
- Medicine14%
- Agricultural and Biological Sciences7.4%
- Environmental Science7.2%
- Immunology and Microbiology3%
- Dentistry2.8%
- Other4.1%
Topics
- Gut microbiota and health17.6%
- Genomics and Phylogenetic Studies4.2%
- Clostridium difficile and Clostridium perfringens research3.8%
- CRISPR and Genetic Engineering3.7%
- Microbial Community Ecology and Physiology3.2%
- Probiotics and Fermented Foods3.1%
- Other64.4%
Coauthors
- Georgia Giannoukos10
- Ashlee M. Earl5
- Dirk Gevers5
- Diana Tabbaa3
- Doyle V. Ward3
- Eugenio Marco3
- Andreas Gnirke2
- Barbara A. Methé2
- Brian J. Haas2
- Bruce W. Birren2
- Christopher J. Wilson2
- Curtis Huttenhower2
- Eric J. Alm2
- Erica Sodergren2
- Hariharan Jayaram2
- Jacques Izard2
- Jonathan Livny2
- Luis Barrera2
- Michele Busby2
- Morgan L. Maeder2
- Olukemi O. Abolude2
- Ramana Madupu2
- Rob Knight2
- Sebastian Gloskowski2
All papers
- A framework for human microbiome research
Authors: Ravi Sanka, Johannes B. Goll, Jason Miller, Leslie Foster, Dana A. Busam, A. Scott Durkin, Jamison McCorrison, Manolito Torralba, Indresh Singh, Jamison M. McCorrison, Ramana Madupu, Dana Busam, Barbara A. Methé, Kelvin Li, Monika Bihan, Granger G. Sutton, Mathangi Thiagarajan, Bo Liu, Sergey Koren, Mihai Pop, Sergey Koren, Jonathan Crabtree, Cesar Arze, Lynn M. Schriml, Anup Mahurkar, Brandi L. Cantarel, Owen White, Victor Felix, James R. White, Jacques Ravel, Olukemi O. Abolude, Michelle Giglio, Heather H. Creasy, Catherine Jordan, Joshua Orvis, Noam J. Davidovics, J. Fah Sathirapongsasuti, Curtis Huttenhower, Nicola Segata, Theresa A. Hepburn, Georgia Giannoukos, Chad Nusbaum, Diana Tabbaa, Sharvari Gujja, Jonathan M. Goldberg, Eric J. Alm, Ashlee M. Earl, Brian J. Haas, Sarah Young, Michael Feldgarden, Narmada Shenoy, Dirk Gevers, Jennifer R. Wortman, M.A. Pearson, Zhengyuan Wang, Chandri Yandava, Margaret Priest, Jeremy Zucker, Curtis Huttenhower, Scott Anderson, Sheila Fisher, Katherine Huang, Doyle V. Ward, Dennis C. Friedrich, Clinton Howarth, Cristyn Kells, Bruce W. Birren, Qiandong Zeng, Carsten Russ, Toby Bloom, Lucia Alvarado, Allison Griggs, Michael G. FitzGerald, Dawn Ciulla, Teena Mehta, Harindra Arachchi, Rachel Erlich, Sean M. Sykes, Yiming Zhu, Richard A. Gibbs, Vandita Joshi, Sarah K. Highlander, Lan Zhang, Huaiyang Jiang, Yue Liu, Katarzyna Wilczek-Boney, Irene Newsham, Kim C. Worley, Lora Lewis, Michael Holder, Niall J. Lennon, Shannon Dugan, Jeffrey G. Reid, Yan Ding, Donna M. Muzny, Yuan Qing Wu, Xiang Qin, Christian Buhay, Sandra L. Lee, Christie Kovar and 148 more - Nature 2012 cited by 2,775
- Development of a gene-editing approach to restore vision loss in Leber congenital amaurosis type 10
Authors: Morgan L. Maeder, Michael Stefanidakis, Christopher J. Wilson, Reshica Baral, Luis Barrera, George S. Bounoutas, David Bumcrot, Hoson Chao, Dawn Ciulla, Jennifer A. DaSilva, Abhishek Dass, Vidya Dhanapal, Tim Fennell, Ari E. Friedland, Georgia Giannoukos, Sebastian Gloskowski, Alexandra Glucksmann, Gregory Gotta, Hariharan Jayaram, Scott Haskett, Bei Hopkins, Joy E. Horng, Shivangi Joshi, Eugenio Marco, Rina J. Mepani, Deepak Reyon, Terence Ta, Diana Tabbaa, Steven J. Samuelsson, Shen Shen, Maxwell N. Skor, Pam Stetkiewicz, Tongyao Wang, Clifford Yudkoff, Vic E. Myer, Charles F. Albright, Haiyan Jiang - Nature Medicine 2019 cited by 706
- Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons
Authors: Brian J. Haas, Dirk Gevers, Ashlee M. Earl, Mike Feldgarden, Doyle V. Ward, Georgia Giannoukos, Dawn Ciulla, Diana Tabbaa, Sarah K. Highlander, Erica Sodergren, Barbara A. Methé, Todd Z. DeSantis, Joseph F. Petrosino, Rob Knight, Bruce W. Birren - Genome Research 2011 cited by 3,549
- Relating the metatranscriptome and metagenome of the human gut
Authors: Eric A. Franzosa, Xochitl C. Morgan, Nicola Segata, Levi Waldron, Joshua A Reyes, Ashlee M. Earl, Georgia Giannoukos, Matthew R. Boylan, Dawn Ciulla, Dirk Gevers, Jacques Izard, Wendy S. Garrett, Andrew T. Chan, Curtis Huttenhower - National Academy of Sciences, Proceedings of the National Academy of Sciences 2014 cited by 720
- A highly efficient transgene knock-in technology in clinically relevant cell types
Authors: Alexander G. Allen, Samia Khan, Carrie M. Margulies, Ramya Viswanathan, Swarali Surendra Lele, Laura Blaha, Sean Scott, Kaitlyn M. Izzo, Alexandra Gerew, Rithu Pattali, Nadire R. Cochran, Carl S. Holland, Amy H. Zhao, Stephen E. Sherman, Michael Jaskolka, Meng Wu, Aaron Wilson, Xiaoqi Sun, Dawn Ciulla, Deric Zhang, Jacqueline D. Nelson, Peisheng Zhang, Patrizia Mazzucato, Yan Huang, Georgia Giannoukos, Eugenio Marco, Michael Nehil, John A. Follit, Kai‐Hsin Chang, Mark S. Shearman, Christopher J. Wilson, John A. Zuris - Nature Biotechnology 2023 cited by 65
- Simultaneous generation of many RNA-seq libraries in a single reaction
Authors: A.A. Shishkin, Georgia Giannoukos, Alper Küçükural, Dawn Ciulla, Michele Busby, Christine Surka, Jenny Chen, Roby P. Bhattacharyya, Robert F. Rudy, Milesh M. Patel, Nathaniel Novod, Deborah T. Hung, Andreas Gnirke, Manuel Garber, Mitchell Guttman, Jonathan Livny - Nature Methods 2015 cited by 322
- UDiTaS™, a genome editing detection method for indels and genome rearrangements
Authors: Georgia Giannoukos, Dawn Ciulla, Eugenio Marco, Hayat Abdulkerim, Luis Barrera, Anne Bothmer, Vidya Dhanapal, Sebastian Gloskowski, Hariharan Jayaram, Morgan L. Maeder, Maxwell N. Skor, Tongyao Wang, Vic E. Myer, Christopher J. Wilson - BMC Genomics 2018 cited by 139
- Functional optimization of gene clusters by combinatorial design and assembly
Authors: Michael J. Smanski, Swapnil Bhatia, Dehua Zhao, Yong‐Jin Park, Lauren B.A. Woodruff, Georgia Giannoukos, Dawn Ciulla, Michele Busby, Johnathan Calderon, Robert Nicol, D. Benjamin Gordon, Douglas Densmore, Christopher A. Voigt - Nature Biotechnology 2014 cited by 353
- Spatially distinct physiology of Bacteroides fragilis within the proximal colon of gnotobiotic mice
Authors: Gregory P. Donaldson, Wen‐Chi Chou, Abigail L. Manson, Peter Rogov, Thomas Abeel, James Bochicchio, Dawn Ciulla, Alexandre Melnikov, Peter B. Ernst, Hiutung Chu, Georgia Giannoukos, Ashlee M. Earl, Sarkis K. Mazmanian - Nature Microbiology 2020 cited by 101
- Efficient and robust RNA-seq process for cultured bacteria and complex community transcriptomes
Authors: Georgia Giannoukos, Dawn Ciulla, Katherine Huang, Brian J. Haas, Jacques Izard, Joshua Z. Levin, Jonathan Livny, Ashlee M. Earl, Dirk Gevers, Doyle V. Ward, Chad Nusbaum, Bruce W. Birren, Andreas Gnirke - Genome biology 2012 cited by 266
- Structure, function and diversity of the healthy human microbiome
Authors: Curtis Huttenhower, Dirk Gevers, Rob Knight, Sahar Abubucker, Jonathan H. Badger, Asif Chinwalla, Heather H. Creasy, Ashlee M. Earl, Michael G. FitzGerald, Robert S. Fulton, Michelle Giglio, Kymberlie Hallsworth-Pepin, Elizabeth A. Lobos, Ramana Madupu, Vincent Magrini, John C. Martin, Makedonka Mitreva, Donna M. Muzny, Erica Sodergren, James Versalovic, Aye Wollam, Kim C. Worley, Jennifer R. Wortman, Sarah Young, Qiandong Zeng, Kjersti M. Aagaard, Olukemi O. Abolude, Emma Allen‐Vercoe, Eric J. Alm, Lucia Alvarado, Gary L. Andersen, Scott Anderson, Elizabeth L. Appelbaum, Harindra Arachchi, Gary C. Armitage, Cesar Arze, Tulin Ayvaz, Carl C. Baker, Lisa Begg, Tsegahiwot Belachew, Veena Bhonagiri, Monika Bihan, Martin J. Blaser, Toby Bloom, Vivien Bonazzi, J. Paul Brooks, Gregory A. Buck, Christian Buhay, Dana Busam, Joseph L. Campbell, Shane R. Canon, Brandi L. Cantarel, Patrick Chain, I-Min A. Chen, Lei Chen, Shaila Chhibba, Ken Chu, Dawn Ciulla, José C. Clemente, Sandra W. Clifton, Sean Conlan, Jonathan Crabtree, Mary A. Cutting, Noam J. Davidovics, Catherine Davis, Todd Z. DeSantis, Carolyn Deal, Kimberley D. Delehaunty, Floyd E. Dewhirst, Elena Deych, Yan Ding, David J. Dooling, Shannon Dugan, W. Michael Dunne, A. Scott Durkin, R. C. Edgar, Rachel Erlich, Candace N. Farmer, Ruth M. Farrell, Karoline Faust, Michael Feldgarden, Victor Felix, Sheila Fisher, Anthony A. Fodor, Larry J. Forney, Leslie Foster, Valentina Di Francesco, Jonathan Friedman, Dennis C. Friedrich, Catrina C. Fronick, Lucinda Fulton, Hongyu Gao, M. Nathalia Garcia, Georgia Giannoukos, Christina Giblin, Maria Y. Giovanni, Jonathan M. Goldberg, Johannes B. Goll, Antonio González, Allison Griggs and 148 more - Nature 2012 cited by 12,107
- Non-Invasive Mapping of the Gastrointestinal Microbiota Identifies Children with Inflammatory Bowel Disease
Authors: Eliseo Papa, Michael Docktor, Christopher S. Smillie, Sarah Weber, Sarah P. Preheim, Dirk Gevers, Georgia Giannoukos, Dawn Ciulla, Diana Tabbaa, Jay Ingram, David B. Schauer, Doyle V. Ward, Joshua R. Korzenik, Ramnik J. Xavier, Athos Bousvaros, Eric J. Alm - PLoS ONE 2012 cited by 291
All 12 papers shown.
