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Barbara A. Methé

Active 1997–2025

74
Papers
21,527
Citations
47
h-index
70
i10-index

Citations

Citations per year for Barbara A. Methé1979: 1 citations1993: 1 citations1995: 1 citations1998: 11 citations1999: 13 citations2000: 19 citations2001: 11 citations2002: 20 citations2003: 39 citations2004: 44 citations2005: 69 citations2006: 94 citations2007: 68 citations2008: 66 citations2009: 78 citations2010: 103 citations2011: 176 citations2012: 255 citations2013: 332 citations2014: 355 citations2015: 352 citations2016: 350 citations2017: 344 citations2018: 295 citations2019: 668 citations2020: 670 citations2021: 649 citations2022: 582 citations2023: 357 citations2024: 594 citations2025: 215 citations2026: 13 citations1980–1992: no citations, so these years are not shown1994: no citations, so this year is not shown1996–1997: no citations, so these years are not shown

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 2,800 citing papers, 26.5% of this breakdownChina: 1,410 citing papers, 13.3% of this breakdownUnited Kingdom: 587 citing papers, 5.6% of this breakdownGermany: 574 citing papers, 5.4% of this breakdownFrance: 371 citing papers, 3.5% of this breakdownCanada: 336 citing papers, 3.2% of this breakdownAustralia: 304 citing papers, 2.9% of this breakdownNetherlands: 298 citing papers, 2.8% of this breakdownItaly: 284 citing papers, 2.7% of this breakdownSpain: 239 citing papers, 2.3% of this breakdownJapan: 219 citing papers, 2.1% of this breakdownDenmark: 202 citing papers, 1.9% of this breakdown
0%26.5%Other 27.8%

Institutions

Fields

  • Biochemistry, Genetics and Molecular Biology46%
  • Medicine18.4%
  • Environmental Science15.6%
  • Agricultural and Biological Sciences6.4%
  • Immunology and Microbiology4.7%
  • Dentistry2.1%
  • Other6.8%

Topics

  • Gut microbiota and health15.1%
  • Genomics and Phylogenetic Studies5.3%
  • Microbial Community Ecology and Physiology5.2%
  • Clostridium difficile and Clostridium perfringens research3.1%
  • Probiotics and Fermented Foods2.6%
  • Diet and metabolism studies2.4%
  • Other66.3%

Coauthors

All papers

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  1. A framework for human microbiome research

    Authors: Ravi Sanka, Johannes B. Goll, Jason Miller, Leslie Foster, Dana A. Busam, A. Scott Durkin, Jamison McCorrison, Manolito Torralba, Indresh Singh, Jamison M. McCorrison, Ramana Madupu, Dana Busam, Barbara A. Methé, Kelvin Li, Monika Bihan, Granger G. Sutton, Mathangi Thiagarajan, Bo Liu, Sergey Koren, Mihai Pop, Sergey Koren, Jonathan Crabtree, Cesar Arze, Lynn M. Schriml, Anup Mahurkar, Brandi L. Cantarel, Owen White, Victor Felix, James R. White, Jacques Ravel, Olukemi O. Abolude, Michelle Giglio, Heather H. Creasy, Catherine Jordan, Joshua Orvis, Noam J. Davidovics, J. Fah Sathirapongsasuti, Curtis Huttenhower, Nicola Segata, Theresa A. Hepburn, Georgia Giannoukos, Chad Nusbaum, Diana Tabbaa, Sharvari Gujja, Jonathan M. Goldberg, Eric J. Alm, Ashlee M. Earl, Brian J. Haas, Sarah Young, Michael Feldgarden, Narmada Shenoy, Dirk Gevers, Jennifer R. Wortman, M.A. Pearson, Zhengyuan Wang, Chandri Yandava, Margaret Priest, Jeremy Zucker, Curtis Huttenhower, Scott Anderson, Sheila Fisher, Katherine Huang, Doyle V. Ward, Dennis C. Friedrich, Clinton Howarth, Cristyn Kells, Bruce W. Birren, Qiandong Zeng, Carsten Russ, Toby Bloom, Lucia Alvarado, Allison Griggs, Michael G. FitzGerald, Dawn Ciulla, Teena Mehta, Harindra Arachchi, Rachel Erlich, Sean M. Sykes, Yiming Zhu, Richard A. Gibbs, Vandita Joshi, Sarah K. Highlander, Lan Zhang, Huaiyang Jiang, Yue Liu, Katarzyna Wilczek-Boney, Irene Newsham, Kim C. Worley, Lora Lewis, Michael Holder, Niall J. Lennon, Shannon Dugan, Jeffrey G. Reid, Yan Ding, Donna M. Muzny, Yuan Qing Wu, Xiang Qin, Christian Buhay, Sandra L. Lee, Christie Kovar and 148 more - Nature 2012 cited by 2,775

  2. Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

    Authors: Brian J. Haas, Dirk Gevers, Ashlee M. Earl, Mike Feldgarden, Doyle V. Ward, Georgia Giannoukos, Dawn Ciulla, Diana Tabbaa, Sarah K. Highlander, Erica Sodergren, Barbara A. Methé, Todd Z. DeSantis, Joseph F. Petrosino, Rob Knight, Bruce W. Birren - Genome Research 2011 cited by 3,549

  3. Microbial community function and biomarker discovery in the human microbiome

    Authors: Nicola Segata, Sahar Abubucker, Johannes B. Goll, Alyxandria M. Schubert, Jacques Izard, Brandi L. Cantarel, Beltran Rodriguez-Mueller, Levi Waldron, Jeremy Zucker, Mathangi Thiagarajan, Bernard Henrissat, Owen White, Scott T. Kelley, Barbara A. Methé, Patrick D. Schloss, Wendy S. Garrett, Dirk Gevers, Makedonka Mitreva, Curtis Huttenhower - Genome biology 2011 cited by 214

  4. Antibiotics in early life alter the murine colonic microbiome and adiposity

    Authors: Ilseung Cho, Shingo Yamanishi, Laura M. Cox, Barbara A. Methé, Jiří Zavadil, Kelvin Li, Zhan Gao, Douglas Mahana, Kartik Raju, Isabel Teitler, Huilin Li, Alexander V. Alekseyenko, Martin J. Blaser - Nature 2012 cited by 1,637

  5. Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications

    Authors: Pelin Yilmaz, Renzo Kottmann, Dawn Field, Rob Knight, James R. Cole, Linda Amaral‐Zettler, Jack A. Gilbert, Ilene Karsch‐Mizrachi, Anjanette Johnston, Guy Cochrane, Robert Vaughan, Chris Hunter, Joonhong Park, Norman Morrison, Philippe Rocca‐Serra, Peter Sterk, Manimozhiyan Arumugam, Mark Bailey, Laura K. Baumgartner, Bruce W. Birren, Martin J. Blaser, Vivien Bonazzi, Tim Booth, Peer Bork, Frederic D. Bushman, Pier Luigi Buttigieg, Patrick Chain, Emily S. Charlson, Elizabeth K. Costello, Heather Huot-Creasy, Peter Dawyndt, Todd Z. DeSantis, Noah Fierer, Jed A. Fuhrman, Rachel E. Gallery, Dirk Gevers, Richard A. Gibbs, Inigo San Gil, Antonio González, Jeffrey I. Gordon, Robert M. Guralnick, Wolfgang Hankeln, Sarah K. Highlander, Philip Hugenholtz, Janet Jansson, Andrew L. Kau, Scott T. Kelley, Jerry Kennedy, Dan Knights, Omry Koren, Justin Kuczynski, Nikos C. Kyrpides, Robert D. Larsen, Christian L. Lauber, Teresa Legg, Ruth E. Ley, Catherine Lozupone, Wolfgang Ludwig, Donna Lyons, Eamonn Maguire, Barbara A. Methé, Folker Meyer, Brian D. Muegge, Sara Nakielny, Karen E Nelson, Diana R. Nemergut, Josh D. Neufeld, Lindsay K. Newbold, Anna Oliver, Norman R. Pace, Giriprakash Palanisamy, Jörg Peplies, Joseph F. Petrosino, Lita M. Proctor, Elmar Pruesse, Christian Quast, Jeroen Raes, Sujeevan Ratnasingham, Jacques Ravel, David A. Relman, Susanna‐Assunta Sansone, Patrick D. Schloss, Lynn M. Schriml, Rohini Sinha, Michelle I. Smith, Erica Sodergren, Aymé Spor, Jesse Stombaugh, James M. Tiedje, Doyle V. Ward, George M. Weinstock, Doug Wendel, Owen White, Andrew S. Whiteley, Andreas Wilke, Jennifer R. Wortman, Tanya Yatsunenko, Frank Oliver Glöckner - Nature Biotechnology 2011 cited by 809

  6. A Catalog of Reference Genomes from the Human Microbiome

    Authors: Karen E. Nelson, George M. Weinstock, Sarah K. Highlander, Kim C. Worley, Heather H. Creasy, Jennifer R. Wortman, Douglas B. Rusch, Makedonka Mitreva, Erica Sodergren, Asif Chinwalla, Michael Feldgarden, Dirk Gevers, Brian J. Haas, Ramana Madupu, Doyle V. Ward, Bruce W. Birren, Richard A. Gibbs, Barbara A. Methé, Joseph F. Petrosino, Robert L. Strausberg, Granger Sutton, Owen White, Richard K. Wilson, Scott Durkin, Michelle Giglio, Sharvari Gujja, Clint Howarth, Chinnappa D. Kodira, Nikos C. Kyrpides, Teena Mehta, Donna M. Muzny, M.A. Pearson, Kymberlie Pepin, Amrita Pati, Xiang Qin, Chandri Yandava, Qiandong Zeng, Lan Zhang, Aaron M. Berlin, Lei Chen, Theresa A. Hepburn, Justin Johnson, Jamison McCorrison, Jason Miller, Pat Minx, Chad Nusbaum, Carsten Russ, Sean M. Sykes, Chad Tomlinson, Sarah Young, Wesley C. Warren, Jonathan H. Badger, Jonathan Crabtree, Victor Markowitz, Joshua Orvis, Andrew Cree, Steve Ferriera, Lucinda Fulton, Robert S. Fulton, Marcus Gillis, Lisa Hemphill, Vandita Joshi, Christie Kovar, Manolito Torralba, Kris A. Wetterstrand, Amr Abouellleil, Aye Wollam, Christian Buhay, Yan Ding, Shannon Dugan, Michael G. FitzGerald, Mike Holder, Jessica B. Hostetler, Sandra W. Clifton, Emma Allen‐Vercoe, Ashlee M. Earl, Candace N. Farmer, Konstantinos Liolios, Michael G. Surette, Qiang Xu, Craig Pohl, Katarzyna Wilczek-Boney, Dianhui Zhu - Science 2010 cited by 720

  7. Community differentiation of the cutaneous microbiota in psoriasis

    Authors: Alexander V. Alekseyenko, Guillermo I Perez-Perez, Aieska De Souza, Bruce Strober, Zhan Gao, Monika Bihan, Kelvin Li, Barbara A. Methé, Martin J. Blaser - Microbiome 2013 cited by 459

  8. Signature changes in gut microbiome are associated with increased susceptibility to HIV-1 infection in MSM

    Authors: Yue Chen, Lin Huang, Mariah Cole, Alison Morris, Jeremy Martinson, Heather McKay, Matthew J. Mimiaga, Joseph B. Margolick, Adam Fitch, Barbara A. Methé, Vatsala Rangachar Srinivas, Shyamal Peddada, Charles R. Rinaldo - Microbiome 2021 cited by 78

  9. The minimum information about a genome sequence (MIGS) specification

    Authors: Dawn Field, George M Garrity, Tanya Gray, Norman Morrison, Jeremy Selengut, Peter Sterk, Tatiana Tatusova, Nicholas R. Thomson, Michael J. Allen, Samuel V. Angiuoli, Michael Ashburner, Nelson Axelrod, Sandra L. Baldauf, Stuart Ballard, Jeffrey L. Boore, Guy Cochrane, James H. Cole, Peter Dawyndt, Paul de Vos, Claude W. dePamphilis, Robert A. Edwards, Nadeem Faruque, Robert A. Feldman, Jack A. Gilbert, Paul Gilna, Frank Oliver Glöckner, Philip Goldstein, Robert Guralnick, Dan H. Haft, David G. Hancock, Henning Hermjakob, Christiane Hertz‐Fowler, Philip Hugenholtz, Ian Joint, Leonid Kagan, Matthew D. Kane, Jessie Kennedy, George A. Kowalchuk, Renzo Kottmann, Eugene Kolker, Saul Kravitz, Nikos C. Kyrpides, Jim Leebens‐Mack, Suzanna Lewis, Kelvin Li, Allyson Lister, Phillip Lord, Natalia Maltsev, Victor Markowitz, Jennifer B. H. Martiny, Barbara A. Methé, Ilene Karsch‐Mizrachi, Richard Moxon, Karen Nelson, Julian Parkhill, Lita M. Proctor, Owen White, Susanna‐Assunta Sansone, Andrew J. Spiers, Robert Stevens, Paul Swift, Chris Taylor, Yoshio Tateno, Adrian Tett, Sarah L. Turner, David W. Ussery, Bob Vaughan, Naomi Ward, Trish Whetzel, Ingio San Gil, Gareth A. Wilson, Anil Wipat - Nature Biotechnology 2008 cited by 1,164

  10. Respiratory Tract Dysbiosis Is Associated with Worse Outcomes in Mechanically Ventilated Patients

    Authors: Georgios D. Kitsios, Haopu Yang, Libing Yang, Shulin Qin, Adam Fitch, Xiaohong Wang, Katherine Fair, John Evankovich, William Bain, Faraaz Shah, Kelvin Li, Barbara A. Methé, Panayiotis V. Benos, Alison Morris, Bryan J. McVerry - American Journal of Respiratory and Critical Care Medicine 2020 cited by 107

  11. A prospective cohort analysis of gut microbial co-metabolism in Alaska Native and rural African people at high and low risk of colorectal cancer

    Authors: Soeren Ocvirk, Annette Wilson, Joram M. Posma, Jia V. Li, Kathryn R. Koller, Gretchen Day, Christie A. Flanagan, Jill Evon Otto, Pam E Sacco, Frank Sacco, Flora Sapp, Amy Wilson, Keith Newton, Faye M. Brouard, James P. DeLany, Marissa Behnning, Corynn Appolonia, Devavrata Soni, Faheem Bhatti, Barbara A. Methé, Adam Fitch, Alison Morris, H. Rex Gaskins, James Kinross, Jeremy K. Nicholson, Timothy K. Thomas, Stephen J. O’Keefe - American Journal of Clinical Nutrition 2019 cited by 84

  12. Analyses of the Microbial Diversity across the Human Microbiome

    Authors: Kelvin Li, Monika Bihan, Shibu Yooseph, Barbara A. Methé - PLoS ONE 2012 cited by 277

  13. COVID-19 versus Non–COVID-19 Acute Respiratory Distress Syndrome: Comparison of Demographics, Physiologic Parameters, Inflammatory Biomarkers, and Clinical Outcomes

    Authors: William Bain, Haopu Yang, Faraaz Shah, Tomeka Suber, Callie Drohan, Nameer Al‐Yousif, Rebecca DeSensi, N. Bensen, Caitlin Schaefer, Brian Rosborough, Ashwin Somasundaram, Creg J. Workman, Caleb Lampenfeld, Anthony R. Cillo, Carly Cardello, Feng Shan, Tullia C. Bruno, Dario A.A. Vignali, Prabir Ray, Anuradha Ray, Yingze Zhang, Janet Lee, Barbara A. Methé, Bryan J. McVerry, Alison Morris, Georgios D. Kitsios - Annals of the American Thoracic Society 2021 cited by 172

  14. Microbiome disturbance and resilience dynamics of the upper respiratory tract during influenza A virus infection

    Authors: Drishti Kaul, Raveen Rathnasinghe, Marcela Ferrés, Gene S. Tan, Aldo Barrera, Brett E Pickett, Barbara A. Methé, Suman R. Das, Isolda Budnik, Rebecca Halpin, David E. Wentworth, Mirco Schmolke, Ignacio Mena, Randy A. Albrecht, Indresh Singh, Karen E. Nelson, Adolfo García‐Sastre, Christopher L. Dupont, Rafael Medina - Nature Communications 2020 cited by 123

  15. Severe Acute Respiratory Syndrome Coronavirus 2 Viremia Is Associated With Coronavirus Disease 2019 Severity and Predicts Clinical Outcomes

    Authors: Jana L. Jacobs, William Bain, Asma Naqvi, Brittany Staines, Priscila M. S. Castanha, Haopu Yang, Valerie F. Boltz, Simon M. Barratt‐Boyes, Ernesto T. A. Marques, Stephanie L. Mitchell, Barbara A. Methé, Tolani F. Olonisakin, Ghady Haidar, Thomas W. Burke, Elizabeth Petzold, Thomas N. Denny, Chris Woods, Bryan J. McVerry, Janet Lee, Simon C Watkins, Claudette M. St. Croix, Alison Morris, Mary F. Kearney, Mark S. Ladinsky, Pamela J. Björkman, Georgios D. Kitsios, John W. Mellors - Clinical Infectious Diseases 2021 cited by 140

  16. The nonfermentable dietary fiber hydroxypropyl methylcellulose modulates intestinal microbiota

    Authors: Laura M. Cox, Ilseung Cho, Scott A. Young, W.H. Kerr Anderson, Bartholomew J. Waters, Shao‐Ching Hung, Zhan Gao, Douglas Mahana, Monika Bihan, Alexander V. Alekseyenko, Barbara A. Methé, Martin J. Blaser - The FASEB Journal 2012 cited by 130

  17. Lung transplantation for idiopathic pulmonary fibrosis enriches for individuals with telomere-mediated disease

    Authors: Jonathan K. Alder, Rachel M. Sutton, Carlo J. Iasella, Mehdi Nouraie, Ritchie Koshy, S. Hannan, Ernest G. Chan, Xiaoping Chen, Yingze Zhang, Mark J. Brown, Iulia Popescu, Melinda Veatch, Melissa Saul, Annerose Berndt, Barbara A. Methé, Alison Morris, Joseph M. Pilewski, Pablo G. Sánchez, Matthew R. Morrell, Steven D. Shapiro, Kathleen O. Lindell, Kevin F. Gibson, Daniel J. Kass, John F. McDyer - The Journal of Heart and Lung Transplantation 2021 cited by 48

  18. Genome sequence of the dissimilatory metal ion–reducing bacterium Shewanella oneidensis

    Authors: John F. Heidelberg, Ian T. Paulsen, Karen E. Nelson, Eric Gaidos, William Nelson, Timothy D. Read, Jonathan A. Eisen, R. Seshadri, Naomi Ward, Barbara A. Methé, Rebecca A. Clayton, Terry E. Meyer, A. I. Tsapin, James Scott, Maureen J. Beanan, Lauren Brinkac, Sean C. Daugherty, Robert T. DeBoy, Robert J. Dodson, A. Scott Durkin, Daniel H. Haft, James F. Kolonay, Ramana Madupu, Jeremy Peterson, Lowell Umayam, Owen White, Alex M. Wolf, Jessica Vamathevan, Janice F. Weidman, Marjorie Impraim, Kathy E. Lee, Kristy Berry, Chris Lee, Jacob L. Mueller, Hoda Khouri, John Gill, Terry Utterback, Lisa McDonald, Tamara V. Feldblyum, Hamilton O. Smith, J. Craig Venter, Kenneth H. Nealson, Claire M. Fraser - Nature Biotechnology 2002 cited by 850

  19. Diet changes due to urbanization in South Africa are linked to microbiome and metabolome signatures of Westernization and colorectal cancer

    Authors: Matsepo C. Ramaboli, Soeren Ocvirk, Mohammadali Khan Mirzaei, B.L. Eberhart, Maria Valdivia‐Garcia, Amira Metwaly, Klaus Neuhaus, Gareth J. Barker, Jing Ru, Lucky T. Nesengani, D. Mahdi-Joest, Annette Wilson, Sikhumbule K. Joni, D. C. Layman, Jiamin Zheng, Raju K. Mandal, Qing Chen, Miriam R. Perez, Suereta Fortuin, Benjamin Gaunt, David S. Wishart, Barbara A. Methé, Dirk Haller, Jia V. Li, Li Deng, Rina Swart, Stephen J. O’Keefe - Nature Communications 2024 cited by 41

  20. Intractable Coronavirus Disease 2019 (COVID-19) and Prolonged Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Replication in a Chimeric Antigen Receptor-Modified T-Cell Therapy Recipient: A Case Study

    Authors: Matthew K. Hensley, William Bain, Jana L. Jacobs, Sham Nambulli, Urvi M. Parikh, Anthony R. Cillo, Brittany Staines, Amy Heaps, Michele D. Sobolewski, Linda J. Rennick, Bernard Macatangay, Cynthia Klamar-Blain, Georgios D. Kitsios, Barbara A. Methé, Ashwin Somasundaram, Tullia C. Bruno, Carly Cardello, Feng Shan, Creg J. Workman, Prabir Ray, Anuradha Ray, Janet Lee, Rahil Sethi, William E. Schwarzmann, Mark S. Ladinsky, Pamela J. Björkman, Dario A.A. Vignali, W. Paul Duprex, Mounzer Agha, John W. Mellors, Kevin D. McCormick, Alison Morris, Ghady Haidar - Clinical Infectious Diseases 2021 cited by 140

  21. Metagenomic identification of severe pneumonia pathogens in mechanically-ventilated patients: a feasibility and clinical validity study

    Authors: Libing Yang, Ghady Haidar, Haris Zia, Rachel Nettles, Shulin Qin, Xiaohong Wang, Faraaz Shah, Sarah F. Rapport, Themoula Charalampous, Barbara A. Methé, Adam Fitch, Alison Morris, Bryan J. McVerry, Justin O’Grady, Georgios D. Kitsios - Respiratory Research 2019 cited by 124

  22. Adaptation and genomic erosion in fragmented Pseudomonas aeruginosa populations in the sinuses of people with cystic fibrosis

    Authors: Catherine R. Armbruster, C. W. Marshall, Arkadiy I. Garber, Jeffrey A. Melvin, Anna C. Zemke, John Allphin Moore, Paula F. Zamora, Kelvin Li, Ian L. Fritz, Christopher D. Manko, Madison L. Weaver, Jordan R. Gaston, Alison Morris, Barbara A. Methé, William H. DePas, Stella E. Lee, Vaughn S. Cooper, Jennifer M. Bomberger - Cell Reports 2021 cited by 44

  23. The genome sequence of the anaerobic, sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough

    Authors: John F. Heidelberg, R. Seshadri, Shelley A. Haveman, Christopher L. Hemme, Ian T. Paulsen, James F. Kolonay, Jonathan A. Eisen, Naomi Ward, Barbara A. Methé, Lauren Brinkac, Sean C. Daugherty, Robert T. DeBoy, Robert J. Dodson, A. Scott Durkin, Ramana Madupu, William Nelson, Steven A. Sullivan, Derrick E. Fouts, Daniel H. Haft, Jeremy Selengut, Jeremy Peterson, Tanja M. Davidsen, Nikhat Zafar, Liwei Zhou, Diana Radune, George Dimitrov, Mark Hance, Kevin Tran, Hoda Khouri, John Gill, Terry Utterback, Tamara V. Feldblyum, Judy D. Wall, Gerrit Voordouw, Claire M. Fraser - Nature Biotechnology 2004 cited by 651

  24. A hydrogen-based subsurface microbial community dominated by methanogens

    Authors: Francis H. Chapelle, Kathleen O’Neill, Paul M. Bradley, Barbara A. Methé, Stacy Ciufo, LeRoy L. Knobel, Derek R. Lovley - Nature 2002 cited by 506