Douglas B. Rusch
Active 1998–2025
- 57
- Papers
- 25,171
- Citations
- 36
- h-index
- 54
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology57.1%
- Environmental Science12.4%
- Medicine9%
- Agricultural and Biological Sciences6.4%
- Neuroscience3.3%
- Immunology and Microbiology3.1%
- Other8.7%
Topics
- Genomics and Phylogenetic Studies9.2%
- Microbial Community Ecology and Physiology4.8%
- RNA and protein synthesis mechanisms3.9%
- Chromosomal and Genetic Variations2.6%
- Gut microbiota and health2.4%
- Bioinformatics and Genomic Networks2%
- Other75.1%
Coauthors
- Ram Podicheti13
- J. Craig Venter10
- Aaron Buechlein9
- Aaron L. Halpern9
- Shibu Yooseph9
- Julia C. van Kessel6
- Christopher L. Dupont5
- Granger Sutton5
- Kenneth P. Nephew5
- Kimberly A. Rosvall5
- Shannon J. Williamson5
- William P. Inskeep5
- Alexandra B. Bentz4
- Chris Hemmerich4
- Granger G. Sutton4
- Karin Remington4
- M.E. Frazier4
- Robert A. Holt4
- Robert Friedman4
- Zackary J. Jay4
- Andrew G. Clark3
- Chelsea A. Simpson3
- Chinnappa D. Kodira3
- David F. Miller3
All papers
- The Sequence of the Human Genome
Authors: J. Craig Venter, Mark D. Adams, Eugene W. Myers, Peter W. Li, Richard Mural, Granger G. Sutton, Hamilton O. Smith, Mark Yandell, Cheryl Evans, Robert A. Holt, Jeannine D. Gocayne, Peter G. Amanatides, Richard M. Ballew, Daniel H. Huson, Jennifer R. Wortman, Qing Zhang, Chinnappa D. Kodira, Xiangqun Zheng-Bradley, Lin Chen, Marian Skupski, G. Subramanian, Paul D. Thomas, Jinghui Zhang, George L. Gabor Miklos, Catherine R. Nelson, Samuel Broder, Andrew G. Clark, Joe Nadeau, Victor A. McKusick, Norton D. Zinder, Arnold J. Levine, Richard J. Roberts, Mel I. Simon, Carolyn W. Slayman, Michael W. Hunkapiller, Randall Bolanos, Arthur L. Delcher, Ian Dew, Daniel Fasulo, Michael J. Flanigan, Liliana Florea, Aaron L. Halpern, Sridhar Hannenhalli, Saul Kravitz, Samuel Lévy, Clark Mobarry, Knut Reinert, Karin Remington, Jane Abu-Threideh, Ellen M. Beasley, Kendra Biddick, Vivien Bonazzi, Rhonda Brandon, Michele Cargill, Ishwar Chandramouliswaran, Rosane Charlab, Kabir Chaturvedi, Zuoming Deng, Valentina Di Francesco, Patrick Dunn, Karen Eilbeck, Carlos Evangelista, Andrei Gabrielian, Weiniu Gan, Wangmao Ge, Fangcheng Gong, Zhiping Gu, Ping Guan, Thomas J. Heiman, Maureen E. Higgins, Rui‐Ru Ji, Zhaoxi Ke, Karen A. Ketchum, Zhongwu Lai, Yiding Lei, Zhenya Li, Jiayin Li, Yong Liang, Xiaoying Lin, Fu Lu, Gennady V. Merkulov, Natalia V. Milshina, Helen M. Moore, Ashwinikumar K. Naik, Vaibhav A. Narayan, Beena Neelam, Deborah Nusskern, Douglas B. Rusch, Steven L. Salzberg, Wei Shao, Bixiong Chris Shue, Jing‐Tao Sun, Zhen Yuan Wang, Aihui Wang, Xin Wang, Jian Wang, Ming-Hui Wei, Ron Wides, Chunlin Xiao, Chunhua Yan and 173 more - Science 2001 cited by 13,699
- A Catalog of Reference Genomes from the Human Microbiome
Authors: Karen E. Nelson, George M. Weinstock, Sarah K. Highlander, Kim C. Worley, Heather H. Creasy, Jennifer R. Wortman, Douglas B. Rusch, Makedonka Mitreva, Erica Sodergren, Asif Chinwalla, Michael Feldgarden, Dirk Gevers, Brian J. Haas, Ramana Madupu, Doyle V. Ward, Bruce W. Birren, Richard A. Gibbs, Barbara A. Methé, Joseph F. Petrosino, Robert L. Strausberg, Granger Sutton, Owen White, Richard K. Wilson, Scott Durkin, Michelle Giglio, Sharvari Gujja, Clint Howarth, Chinnappa D. Kodira, Nikos C. Kyrpides, Teena Mehta, Donna M. Muzny, M.A. Pearson, Kymberlie Pepin, Amrita Pati, Xiang Qin, Chandri Yandava, Qiandong Zeng, Lan Zhang, Aaron M. Berlin, Lei Chen, Theresa A. Hepburn, Justin Johnson, Jamison McCorrison, Jason Miller, Pat Minx, Chad Nusbaum, Carsten Russ, Sean M. Sykes, Chad Tomlinson, Sarah Young, Wesley C. Warren, Jonathan H. Badger, Jonathan Crabtree, Victor Markowitz, Joshua Orvis, Andrew Cree, Steve Ferriera, Lucinda Fulton, Robert S. Fulton, Marcus Gillis, Lisa Hemphill, Vandita Joshi, Christie Kovar, Manolito Torralba, Kris A. Wetterstrand, Amr Abouellleil, Aye Wollam, Christian Buhay, Yan Ding, Shannon Dugan, Michael G. FitzGerald, Mike Holder, Jessica B. Hostetler, Sandra W. Clifton, Emma Allen‐Vercoe, Ashlee M. Earl, Candace N. Farmer, Konstantinos Liolios, Michael G. Surette, Qiang Xu, Craig Pohl, Katarzyna Wilczek-Boney, Dianhui Zhu - Science 2010 cited by 720
- Bacterial-Driven Inflammation and Mutant BRAF Expression Combine to Promote Murine Colon Tumorigenesis That Is Sensitive to Immune Checkpoint Therapy
Authors: Christina E. DeStefano Shields, James R. White, Liam Chung, Alyssa Wenzel, Jessica Hicks, Ada Tam, June L. Chan, Christine M. Dejea, Hongni Fan, John Michel, Ashley R. Maiuri, Shruthi Sriramkumar, Ram Podicheti, Douglas B. Rusch, Hao Wang, Angelo M. De Marzo, Sepideh Besharati, Robert A. Anders, Stephen B. Baylin, Heather M. O’Hagan, Franck Housseau, Cynthia L. Sears - Cancer Discovery 2021 cited by 87
- Exploring breast tissue microbial composition and the association with breast cancer risk factors
Authors: Rana German, Natascia Marino, Chris Hemmerich, Ram Podicheti, Douglas B. Rusch, Leah T. Stiemsma, Hongyu Gao, Xiaoling Xuei, Pam Rockey, Anna Maria Storniolo - Breast Cancer Research 2023 cited by 73
- The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific
Authors: Douglas B. Rusch, Aaron L. Halpern, Granger Sutton, Karla B. Heidelberg, Shannon J. Williamson, Shibu Yooseph, Dongying Wu, Jonathan A. Eisen, Jeff Hoffman, Karin Remington, Karen Beeson, Bao Tran, Hamilton O. Smith, Holly Baden-Tillson, Clare Stewart, Joyce Thorpe, Jason Freeman, Cynthia Andrews‐Pfannkoch, Joseph E. Venter, Kelvin Li, Saul Kravitz, John F. Heidelberg, Terry Utterback, Yu-Hui Rogers, Luisa I. Falcón, Valeria Souza, Germán Bonilla‐Rosso, Luis E. Eguiarte, David M. Karl, Shubha Sathyendranath, Trevor Platt, Eldredge Bermingham, Víctor A. Gallardo, Giselle Tamayo‐Castillo, Michael R. Ferrari, Robert L. Strausberg, Kenneth Nealson, Robert Friedman, M.E. Frazier, J. Craig Venter - PLoS Biology 2007 cited by 2,103
- The Genome Sequence of the Malaria Mosquito Anopheles gambiae
Authors: Robert A. Holt, G. Subramanian, Aaron L. Halpern, Granger G. Sutton, Rosane Charlab, Deborah Nusskern, Patrick Wincker, Andrew G. Clark, José M. C. Ribeiro, Ron Wides, Steven L. Salzberg, Brendan Loftus, Mark Yandell, William H. Majoros, Douglas B. Rusch, Zhongwu Lai, Cheryl Kraft, Josep F. Abril, Véronique Anthouard, Peter Arensburger, Peter W. Atkinson, Holly Baden, Véronique de Berardinis, Danita Baldwin, Vladimı́r Beneš, Jim Biedler, Claudia Blass, Randall Bolanos, Didier Boscus, Mary Barnstead, Shuang Cai, Kabir Chatuverdi, George K. Christophides, Mathew A. Chrystal, Michèle Clamp, Anibal Cravchik, Val Curwen, Ali Dana, Art L. Delcher, Ian Dew, Cheryl Evans, Michael J. Flanigan, Anne Grundschober-Freimoser, Lisa Friedli, Zhiping Gu, Ping Guan, Roderic Guigó, Maureen E. Hillenmeyer, Susanne L. Hladun, James R. Hogan, Young Seok Hong, Jeffrey P. Hoover, Olivier Jaillon, Zhaoxi Ke, Chinnappa D. Kodira, E. B. Kokoza, Anastasios C. Koutsos, Ivica Letunić, Alex Levitsky, Yong Liang, Jing‐Jer Lin, Neil F. Lobo, John Lopez, Joel A. Malek, Tina C. McIntosh, Stephan Meister, Jason Miller, Clark Mobarry, Emmanuel Mongin, Sean D. Murphy, David A. O’Brochta, Cynthia Pfannkoch, Rong Qi, Megan A. Regier, Karin Remington, Hongguang Shao, Maria V. Sharakhova, Cynthia D. Sitter, Jyoti Shetty, Thomas J. Smith, Renee Strong, Jing‐Tao Sun, Dana Thomasová, Lucas Q. Ton, Pantelis Topalis, Zhijian Tu, Maria Unger, Brian P. Walenz, Aihui Wang, Jian Wang, Mei Wang, Xuelan Wang, Kerry J. Woodford, Jennifer R. Wortman, Martin Wu, Alison Yao, Evgeny M. Zdobnov, Zhang HongYu, Qi Zhao, Shaying Zhao and 22 more - Science 2002 cited by 2,045
- Saccharide breakdown and fermentation by the honey bee gut microbiome
Authors: Fredrick J. Lee, Douglas B. Rusch, Frank J. Stewart, Heather R. Mattila, Irene L. G. Newton - Environmental Microbiology 2014 cited by 295
- Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage
Authors: Christopher L. Dupont, Douglas B. Rusch, Shibu Yooseph, Mary‐Jane Lombardo, R. Alexander Richter, Ruben Valas, Mark Novotny, Joyclyn Yee-Greenbaum, Jeremy Selengut, Dan H. Haft, Aaron L. Halpern, Roger S. Lasken, Kenneth H. Nealson, Robert Friedman, J. Craig Venter - The ISME Journal 2011 cited by 560
- Co-occurring genomic capacity for anaerobic methane and dissimilatory sulfur metabolisms discovered in the Korarchaeota
Authors: Luke J. McKay, Mensur Dlakić, Matthew W. Fields, Tom O. Delmont, A. Murat Eren, Zackary J. Jay, Korinne B. Klingelsmith, Douglas B. Rusch, William P. Inskeep - Nature Microbiology 2019 cited by 144
- Functional Tradeoffs Underpin Salinity-Driven Divergence in Microbial Community Composition
Authors: Christopher L. Dupont, John Larsson, Shibu Yooseph, Karolina Ininbergs, Johannes B. Goll, Johannes Asplund‐Samuelsson, John P. McCrow, Narin Celepli, Lisa Zeigler Allen, Martin Ekman, Andrew J. Lucas, Åke Hagström, Mathangi Thiagarajan, Björn Brindefalk, Alexander Richter, Anders F. Andersson, Aaron Tenney, Daniel Lundin, Andrey Tovchigrechko, Johan A. A. Nylander, Daniel Brami, Jonathan H. Badger, Andrew E. Allen, Douglas B. Rusch, Jeff Hoffman, Erling Norrby, Robert Friedman, Jarone Pinhassi, J. Craig Venter, Birgitta Bergman - PLoS ONE 2014 cited by 229
- Probing biophysical sequence constraints within the transmembrane domains of rhodopsin by deep mutational scanning
Authors: Wesley D. Penn, Andrew G. McKee, Charles P. Kuntz, Hope Woods, Veronica Nash, Timothy C. Gruenhagen, Francis J. Roushar, Mahesh Chandak, Chris Hemmerich, Douglas B. Rusch, Jens Meiler, Jonathan P. Schlebach - Science Advances 2020 cited by 59
- Diversity in Natural Transformation Frequencies and Regulation across Vibrio Species
Authors: Chelsea A. Simpson, Ram Podicheti, Douglas B. Rusch, Ankur B. Dalia, Julia C. van Kessel - mBio 2019 cited by 41
- The coral pathogen Vibrio coralliilyticus uses a T6SS to secrete a group of novel anti-eukaryotic effectors that contribute to virulence
Authors: Shir Mass, Hadar Cohen, Ram Podicheti, Douglas B. Rusch, Motti Gerlic, Blake Ushijima, Julia C. van Kessel, Eran Bosis, Dor Salomon - PLoS Biology 2024 cited by 31
- METAREP: JCVI metagenomics reports - an open source tool for high-performance comparative metagenomics
Authors: Johannes B. Goll, Douglas B. Rusch, David M. Tanenbaum, Mathangi Thiagarajan, Kelvin Li, Barbara A. Methé, Shibu Yooseph - Bioinformatics, Bioinform. 2010 cited by 133
- Viral photosynthetic reaction center genes and transcripts in the marine environment
Authors: Itai Sharon, Shani Tzahor, Shannon J. Williamson, Michael Shmoish, Dikla Man‐Aharonovich, Douglas B. Rusch, Shibu Yooseph, Gil Zeidner, Susan S. Golden, Shannon R. Mackey, Noam Adir, Uri Weingart, D. Horn, J. Craig Venter, Yael Mandel‐Gutfreund, Oded Béjà - The ISME Journal 2007 cited by 127
- Pten and Dicer1 loss in the mouse uterus causes poorly differentiated endometrial adenocarcinoma
Authors: Xiyin Wang, Jillian R. H. Wendel, Robert E. Emerson, Russell R. Broaddus, Chad J. Creighton, Douglas B. Rusch, Aaron Buechlein, Francesco J. DeMayo, John P. Lydon, Shannon M. Hawkins - Oncogene 2020 cited by 21
- The Sorcerer II Global Ocean Sampling Expedition: Expanding the Universe of Protein Families
Authors: Shibu Yooseph, Granger Sutton, Douglas B. Rusch, Aaron L. Halpern, Shannon J. Williamson, Karin Remington, Jonathan A. Eisen, Karla B. Heidelberg, Gerard Manning, Weizhong Li, Lukasz Jaroszewski, Piotr Cieplak, Christopher S. Miller, Huiying Li, Susan T. Mashiyama, Marcin P. Joachimiak, Christopher van Belle, John‐Marc Chandonia, David Soergel, Yufeng Zhai, Kannan Natarajan, Shaun Wen Huey Lee, Benjamin J. Raphael, Vineet Bafna, Robert Friedman, Steven E. Brenner, Adam Godzik, David Eisenberg, Jack E. Dixon, Susan S. Taylor, Robert L. Strausberg, M.E. Frazier, J. Craig Venter - PLoS Biology 2007 cited by 929
- Genomic and functional adaptation in surface ocean planktonic prokaryotes
Authors: Shibu Yooseph, Kenneth H. Nealson, Douglas B. Rusch, John P. McCrow, Christopher L. Dupont, Maria Kim, Justin Johnson, Robert A. Montgomery, Steve Ferriera, Karen Beeson, Shannon J. Williamson, Andrey Tovchigrechko, Andrew E. Allen, Lisa Zeigler, Granger Sutton, Eric Eisenstadt, Yu-Hui Rogers, Robert Friedman, M.E. Frazier, J. Craig Venter - Nature 2010 cited by 327
- The Sorcerer II Global Ocean Sampling Expedition: Metagenomic Characterization of Viruses within Aquatic Microbial Samples
Authors: Shannon J. Williamson, Douglas B. Rusch, Shibu Yooseph, Aaron L. Halpern, Karla B. Heidelberg, John I. Glass, Cynthia Andrews‐Pfannkoch, Douglas Fadrosh, Christopher S. Miller, Granger Sutton, M.E. Frazier, J. Craig Venter - PLoS ONE 2008 cited by 321
- A Hybrid Nanofiber/Paper Cell Culture Platform for Building a 3D Blood–Brain Barrier Model
Authors: Kaixiang Huang, Andre D. Castiaux, Ram Podicheti, Douglas B. Rusch, R. Scott Martin, Lane A. Baker - Small Methods 2021 cited by 19
- ZEB2 regulates endocrine therapy sensitivity and metastasis in luminal a breast cancer cells through a non-canonical mechanism
Authors: Hope E. Burks, Margarite D. Matossian, Lyndsay V. Rhodes, Theresa B. Phamduy, Steven Elliott, Aaron Buechlein, Douglas B. Rusch, David F. Miller, Kenneth P. Nephew, Douglas B. Chrisey, Bridgette M. Collins‐Burow, Matthew E. Burow - Breast Cancer Research and Treatment 2021 cited by 15
- Metagenomes from High-Temperature Chemotrophic Systems Reveal Geochemical Controls on Microbial Community Structure and Function
Authors: William P. Inskeep, Douglas B. Rusch, Zackary J. Jay, Markus J. Herrgård, Mark A. Kozubal, Toby H. Richardson, Richard E. Macur, Natsuko Hamamura, Ryan deM. Jennings, Bruce W. Fouke, Anna‐Louise Reysenbach, Frank Roberto, Mark Young, Ariel Schwartz, Eric S. Boyd, Jonathan H. Badger, Eric J. Mathur, Alice C. Ortmann, Mary M. Bateson, Gill G. Geesey, M.E. Frazier - PLoS ONE 2010 cited by 214
- Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
Authors: Cristina Takacs‐Vesbach, William P. Inskeep, Zackary J. Jay, Markus J. Herrgård, Douglas B. Rusch, Susannah G. Tringe, Mark A. Kozubal, Natsuko Hamamura, Richard E. Macur, Bruce W. Fouke, Anna‐Louise Reysenbach, Timothy R. McDermott, Ryan deM. Jennings, Nicolas Hengartner, Gary Xie - Frontiers in Microbiology 2013 cited by 85
- Global H-NS counter-silencing by LuxR activates quorum sensing gene expression
Authors: Ryan R. Chaparian, Minh L. N. Tran, Laura C. Miller, Douglas B. Rusch, Julia C. van Kessel - Nucleic Acids Research 2019 cited by 43
