Gunnar Rätsch
Active 1997–2026
- 240
- Papers
- 37,108
- Citations
- 76
- h-index
- 168
- i10-index
Citations
Citation sources
Countries
Institutions
- Chinese Academy of Sciences0.8%
- Centre National de la Recherche Scientifique0.8%
- Harvard University0.6%
- Cornell University0.5%
- Stanford University0.5%
- ETH Zurich0.4%
- Other96.4%
Fields
- Computer Science44.9%
- Biochemistry, Genetics and Molecular Biology24.1%
- Engineering8.2%
- Medicine6.3%
- Agricultural and Biological Sciences4.8%
- Neuroscience2.5%
- Other9.2%
Topics
- Face and Expression Recognition6%
- Neural Networks and Applications3%
- RNA and protein synthesis mechanisms1.7%
- RNA Research and Splicing1.7%
- Genomics and Phylogenetic Studies1.6%
- Image Retrieval and Classification Techniques1.5%
- Other84.5%
Coauthors
- Bernhard Schölkopf37
- André Kahles34
- Klaus-Robert Müller27
- Sören Sonnenburg21
- Christian Widmer18
- Sebastian Mika18
- Georg Zeller17
- Francesco Locatello16
- Vincent Fortuin16
- Harun Mustafa14
- Matthias Hüser14
- Alexander J. Smola12
- Jonas Behr12
- Martin Faltys12
- Philipp Drewe12
- Kjong-Van Lehmann11
- Manuel Burger11
- Mikhail Karasikov11
- Stephanie L. Hyland11
- Hugo Yèche10
- Manfred K. Warmuth10
- Rita Kuznetsova10
- Ximena Bonilla10
- Regina Bohnert9
All papers
- Determination and Inference of Eukaryotic Transcription Factor Sequence Specificity
Authors: Matthew T. Weirauch, Ally Yang, Mihai Albu, Atina G. Coté, Alejandro Montenegro‐Montero, Philipp Drewe, Hamed S. Najafabadi, Samuel A. Lambert, Ishminder K. Mann, Kate B. Cook, Hong Zheng, Alejandra Goity, Harm van Bakel, Jean-Claude Lozano, Mary Galli, Mathew G. Lewsey, Eryong Huang, Tuhin Mukherjee, Xiaoting Chen, John Reece-Hoyes, Sridhar Govindarajan, Gad Shaulsky, Albertha J.M. Walhout, François-Yves Bouget, Gunnar Rätsch, Luis Larrondo, Joseph R. Ecker, Timothy R. Hughes - Cell 2014 cited by 2,061
- Real-valued (Medical) Time Series Generation with Recurrent Conditional GANs
Authors: Cristóbal Esteban, Stephanie L. Hyland, Gunnar Rätsch - arXiv (Cornell University), CoRR 2017 cited by 445
- Early prediction of circulatory failure in the intensive care unit using machine learning
Authors: Stephanie L. Hyland, Martin Faltys, Matthias Hüser, Xinrui Lyu, Thomas Gumbsch, Cristóbal Esteban, Christian Bock, Max Horn, Michael Moor, Bastian Rieck, Marc Zimmermann, Dean A. Bodenham, Karsten Borgwardt, Gunnar Rätsch, Tobias M. Merz - Nature Medicine 2020 cited by 451
- Learning single-cell perturbation responses using neural optimal transport
Authors: Charlotte Bunne, Stefan G. Stark, Gabriele Gut, Jacobo Sarabia del Castillo, Mitch P. Levesque, Kjong-Van Lehmann, Lucas Pelkmans, Andreas Krause, Gunnar Rätsch - Nature Methods 2023 cited by 163
- Challenging Common Assumptions in the Unsupervised Learning of Disentangled Representations
Authors: Francesco Locatello, Stefan Bauer, Mario Lucic, Gunnar Rätsch, Sylvain Gelly, Bernhard Schölkopf, Olivier Bachem - ICML 2019 cited by 1,831
- A global metagenomic map of urban microbiomes and antimicrobial resistance
Authors: David Danko, Daniela Bezdan, Evan E. Afshin, Sofia Ahsanuddin, Chandrima Bhattacharya, Daniel Butler, Kern Rei Chng, Daisy Donnellan, Jochen Hecht, Katelyn Jackson, Katerina Kuchin, Mikhail Karasikov, Abigail Lyons, Lauren Mak, Dmitry Meleshko, Harun Mustafa, Beth Mutai, Russell Y. Neches, Amanda Hui Qi Ng, Olga Nikolayeva, Tatyana Nikolayeva, Eileen Png, Krista Ryon, Jorge L. Sánchez, Heba Shaaban, Maria A. Sierra, Dominique Thomas, Ben Young, Omar O. Abudayyeh, Josue Alicea, Malay Bhattacharyya, Ran Blekhman, Eduardo Castro‐Nallar, A Cañas, Aspassia D. Chatziefthimiou, Robert W. Crawford, Francesca De Filippis, Youping Deng, Christelle Desnues, Emmanuel Dias‐Neto, Marius Dybwad, Eran Elhaik, Danilo Ercolini, Alina Frolova, Dennis Gankin, Jonathan S. Gootenberg, Alexandra B. Graf, David C. Green, Iman Hajirasouliha, Jaden J. A. Hastings, Mark Hernandez, Gregorio Iraola, Soojin Jang, André Kahles, Frank J. Kelly, Kaymisha Knights, Nikos C. Kyrpides, Paweł P. Łabaj, Patrick K. H. Lee, Marcus H. Y. Leung, Per O. Ljungdahl, Gabriella Mason-Buck, Ken McGrath, Cem Meydan, Emmanuel F. Mongodin, Milton Ozório Moraes, Niranjan Nagarajan, Marina Nieto‐Caballero, Houtan Noushmehr, Manuela Oliveira, Stephan Ossowski, Olayinka Osuolale, Orhan Özcan, David Páez-Espino, Nicolás Rascovan, Hugues Richard, Gunnar Rätsch, Lynn M. Schriml, Torsten Semmler, Osman Uğur Sezerman, Leming Shi, Tieliu Shi, Rania Siam, Le Huu Song, Haruo Suzuki, Denise Syndercombe Court, Scott Tighe, Xinzhao Tong, Klas I. Udekwu, Juan A. Ugalde, Brandon Valentine, Dimitar Vassilev, Elena Vayndorf, Thirumalaisamy P. Velavan, Jun Wu, María Mercedes Zambrano, Jifeng Zhu, Sibo Zhu, Christopher E. Mason, Natasha Abdullah and 579 more - Cell 2021 cited by 398
- An introduction to kernel-based learning algorithms
Authors: Klaus-Robert Müller, Sebastian Mika, Gunnar Rätsch, Koji Tsuda, Bernhard Schölkopf - IEEE Transactions on Neural Networks, IEEE Trans. Neural Networks 2001 cited by 3,490
- HBEGF + macrophages in rheumatoid arthritis induce fibroblast invasiveness
Authors: David Kuo, Jennifer Ding, Ian S. Cohn, Fan Zhang, Kevin Wei, Deepak A. Rao, Cristina Rozo, Upneet K. Sokhi, Sara Shanaj, David J. Oliver, Adriana P. Echeverria, Edward F. DiCarlo, Michael B. Brenner, Vivian P. Bykerk, Susan M. Goodman, Soumya Raychaudhuri, Gunnar Rätsch, Lionel B. Ivashkiv, Laura T. Donlin - Science Translational Medicine 2019 cited by 258
- Ecological Modeling from Time-Series Inference: Insight into Dynamics and Stability of Intestinal Microbiota
Authors: Richard R. Stein, Vanni Bucci, Nora C. Toussaint, Charlie G. Buffie, Gunnar Rätsch, Eric G. Pamer, Chris Sander, João B. Xavier - PLoS Computational Biology, PLoS Comput. Biol. 2013 cited by 685
- RNA G-quadruplexes cause eIF4A-dependent oncogene translation in cancer
Authors: Andrew L. Wolfe, Kamini Singh, 義夫 田中, Philipp Drewe, Vinagolu K. Rajasekhar, Viraj R. Sanghvi, Konstantinos J. Mavrakis, Man Jiang, Justine E. Roderick, Joni Van der Meulen, Jonathan H. Schatz, Christina M. Rodrigo, Chunying Zhao, Pieter Rondou, Elisa de Stanchina, Julie Teruya‐Feldstein, Michelle A. Kelliher, Frank Speleman, John A. Porco, Jerry Pelletier, Gunnar Rätsch, Hans-Guido Wendel - Nature 2014 cited by 646
- A guide to sharing open healthcare data under the General Data Protection Regulation
Authors: Jip W T M de Kok, Miguel Ángel Armengol de la Hoz, Y. de Jong, Véronique Brokke, Paul Elbers, Patrick Thoral, Alejandro Castillejo, Tomás Trenor, José María Castellano, Alberto E. Bronchalo, Tobias M. Merz, Martin Faltys, Collaborator group, Cristina Casares, Araceli Jiménez, Jaime Requejo, Sonia Gutiérrez, David Curto, Gunnar Rätsch, Jan M. Peppink, Ronald H. Driessen, Eric J.G. Sijbrands, Erwin J. O. Kompanje, Armand R. J. Girbes, José Barberán, José F. Varona, Paula Villares, Iwan C.C. van der Horst, Minnan Xu, Leo Anthony Celi, Bas C. T. van Bussel, X. Borrat - Scientific Data 2023 cited by 91
- Prediction of potent shRNAs with a sequential classification algorithm
Authors: Raphael Pelossof, Lauren Fairchild, Chun‐Hao Huang, Christian Widmer, Vipin T. Sreedharan, Nishi Sinha, Dan-Yu Lai, Yuanzhe Guan, Prem K. Premsrirut, Darjus F. Tschaharganeh, Thomas Hoffmann, Vishal Thapar, Qing Xiang, Ralph Garippa, Gunnar Rätsch, Johannes Zuber, Scott W. Lowe, Christina S. Leslie, Christof Fellmann - Nature Biotechnology 2017 cited by 204
- A Pan-cancer Transcriptome Analysis Reveals Pervasive Regulation through Alternative Promoters
Authors: Deniz Demircioğlu, Engin Cukuroglu, Martin Kindermans, Tannistha Nandi, Claudia Calabrese, Nuno A. Fonseca, André Kahles, Kjong-Van Lehmann, Oliver Stegle, Alvis Brāzma, Angela N. Brooks, Gunnar Rätsch, Patrick Tan, Jonathan Göke - Cell 2019 cited by 271
- The Feature Importance Ranking Measure
Authors: Alexander Zien, Nicole Krämer, Sören Sonnenburg, Gunnar Rätsch - Lecture notes in computer science, ECML/PKDD (2) 2009 cited by 172
- Fisher discriminant analysis with kernels
Authors: S. Mika, Gunnar Rätsch, Jason Weston, Bernhard Schölkopf, K.R. Mullers - Neural Networks for Signal Processing IX: Proceedings of the 1999 IEEE Signal Processing Society Workshop (Cat. No.98TH8468) 2003 cited by 2,671
- Support Vector Machines and Kernels for Computational Biology
Authors: Asa Ben-Hur, Cheng Soon Ong, Sören Sonnenburg, Bernhard Schölkopf, Gunnar Rätsch - PLoS Computational Biology, PLoS Comput. Biol. 2008 cited by 717
- Cartography of opportunistic pathogens and antibiotic resistance genes in a tertiary hospital environment
Authors: Kern Rei Chng, Chenhao Li, Denis Bertrand, Amanda Hui Qi Ng, Junmei Samantha Kwah, Hwee Meng Low, Chengxuan Tong, Maanasa Natrajan, Michael Hongjie Zhang, Licheng Xu, Karrie Kwan Ki Ko, Eliza Xin Pei Ho, Tamar V. Av‐Shalom, Jeanette Teo, Chiea Chuen Khor, David Danko, Daniela Bezdan, Ebrahim Afshinnekoo, Sofia Ahsanuddin, Chandrima Bhattacharya, Daniel Butler, Kern Rei Chng, Francesca De Filippis, Jochen Hecht, André Kahles, Mikhail Karasikov, Nikos C. Kyrpides, Marcus H. Y. Leung, Dmitry Meleshko, Harun Mustafa, Beth Mutai, Russell Y. Neches, Amanda Hui Qi Ng, Marina Nieto‐Caballero, Olga Nikolayeva, Tatyana Nikolayeva, Eileen Png, Jorge L. Sánchez, Heba Shaaban, Maria A. Sierra, Xinzhao Tong, Ben Young, Josue Alicea, Malay Bhattacharyya, Ran Blekhman, Eduardo Castro‐Nallar, A Cañas, Aspassia D. Chatziefthimiou, Robert W. Crawford, Youping Deng, Christelle Desnues, Emmanuel Dias‐Neto, Daisy Donnellan, Marius Dybwad, Eran Elhaik, Danilo Ercolini, Alina Frolova, Alexandra B. Graf, David C. Green, Iman Hajirasouliha, Mark Hernandez, Gregorio Iraola, Soojin Jang, Angela Jones, Frank J. Kelly, Kaymisha Knights, Paweł P. Łabaj, Patrick K. H. Lee, Levy Shawn, Per O. Ljungdahl, Abigail Lyons, Gabriella Mason-Buck, Ken McGrath, Emmanuel F. Mongodin, Milton Ozório Moraes, Niranjan Nagarajan, Houtan Noushmehr, Manuela Oliveira, Stephan Ossowski, Olayinka Osuolale, Orhan Özcan, David Páez-Espino, Nicolás Rascovan, Hugues Richard, Gunnar Rätsch, Lynn M. Schriml, Torsten Semmler, Osman Uğur Sezerman, Leming Shi, Le Huu Song, Haruo Suzuki, Denise Syndercombe Court, Dominique Thomas, Scott Tighe, Klas I. Udekwu, Juan A. Ugalde, Brandon Valentine, Dimitar Vassilev, Elena Vayndorf, Thirumalaisamy P. Velavan and 10 more - Nature Medicine 2020 cited by 256
- Integrative Analysis of the Caenorhabditis elegans Genome by the modENCODE Project
Authors: Mark Gerstein, Zhi John Lu, Eric L. Van Nostrand, Chao Cheng, Bradley I. Arshinoff, Tao Liu, Kevin Y. Yip, R. Robilotto, Andreas Rechtsteiner, Kohta Ikegami, Pedro Alves, Aurélien Chateigner, Marc D. Perry, Mitzi Morris, Raymond K. Auerbach, Xin Feng, Jing Leng, Anne Vielle, Wei Niu, Kahn Rhrissorrakrai, Ashish Agarwal, Roger P. Alexander, Galt P Barber, Cathleen Brdlik, Jennifer Brennan, Jeremy Brouillet, Adrian R. Carr, Ming-Sin Cheung, Hiram Clawson, Sergio Contrino, Luke O. Dannenberg, Abby F. Dernburg, Arshad Desai, Lindsay L. Dick, Andrea C. Dosé, Jiang Du, Thea A. Egelhofer, Sevinç Ercan, Ghia Euskirchen, Brent Ewing, Elise A. Feingold, Reto Gassmann, Peter J. Good, Phil Green, F. Gullier, Michelle Gutwein, Mark S. Guyer, Lukas Habegger, Ting Han, Jorja G. Henikoff, Stefan R. Henz, Angie S. Hinrichs, H. Holster, Tony Hyman, Al Iniguez, J. Janette, Morten B. Jensen, Masaomi Kato, W. James Kent, Ellen Kephart, Vishal Khivansara, Ekta Khurana, John K. Kim, Paulina Kolasinska-Zwierz, Eric C. Lai, Isabel Latorre, A. Leahey, Suzanna Lewis, Paul Lloyd, Lucas Lochovsky, Rebecca F. Lowdon, Yaniv Lubling, Rachel Lyne, Michael J. MacCoss, Sebastian D. Mackowiak, Marco Mangone, Sheldon McKay, Desirea Mecenas, Gennifer E. Merrihew, David M. Miller, Andrew Muroyama, John I. Murray, Siew-Loon Ooi, Vu Pham, T. Phippen, Elicia Preston, Nikolaus Rajewsky, Gunnar Rätsch, Heidi Rosenbaum, Joel Rozowsky, Kim Rutherford, Peter Ruzanov, Mihail Sarov, Rajkumar Sasidharan, Andrea Sboner, Paul Scheid, Eran Segal, Hyunjin Shin, Chong Shou, Frank J. Slack and 31 more - Science 2010 cited by 1,041
- Predicting Time Series with Support Vector Machines
Authors: Klaus-Robert Müller, Alexander J. Smola, Gunnar Rätsch, Bernhard Schölkopf, Jens Kohlmorgen, Vladimir Vapnik - Lecture notes in computer science, ICANN 1997 cited by 985
- DNA methylation in Arabidopsis has a genetic basis and shows evidence of local adaptation
Authors: Manu Dubin, Pei Zhang, Dazhe Meng, Marie‐Stanislas Remigereau, Edward J. Osborne, Francesco Paolo Casale, Philipp Drewe, André Kahles, Géraldine Jean, Bjarni J. Vilhjálmsson, Joanna Gunis, Selen Irez, Viktor Voronin, Qiang Song, Quan Long, Gunnar Rätsch, Oliver Stegle, Richard M. Clark, Magnus Nordborg - eLife 2015 cited by 560
- Interferon-γ regulates cellular metabolism and mRNA translation to potentiate macrophage activation
Authors: Xiaodi Su, Yingpu Yu, 義夫 田中, Ευγενία Γιαννοπούλου, Xiaoyu Hu, Hui Liu, Justin R. Cross, Gunnar Rätsch, Charles M. Rice, Lionel B. Ivashkiv - Nature Immunology 2015 cited by 300
- Soft Margins for AdaBoost
Authors: Gunnar Rätsch, Takashi Onoda, Klaus-Robert Müller - Machine Learning, Mach. Learn. 1998 cited by 1,306
- Input space versus feature space in kernel-based methods
Authors: Bernhard Schölkopf, Sebastian Mika, Christopher J. C. Burges, Phil Knirsch, Klaus-Robert Müller, Gunnar Rätsch, Alexander J. Smola - IEEE Transactions on Neural Networks, IEEE Trans. Neural Networks 1999 cited by 1,175
- Detection of isoforms and genomic alterations by high-throughput full-length single-cell RNA sequencing in ovarian cancer
Authors: Arthur Dondi, Ulrike Lischetti, Francis Jacob, Franziska Singer, Nico Borgsmüller, Ricardo Coelho, Rudolf Aebersold, Melike Ak, Faisal Alquaddoomi, Silvana I. Albert, Jonas Albinus, Ilaria Alborelli, Sonali Andani, Per-Olof Attinger, Marina Bacac, Daniel Baumhoer, Beatrice Beck‐Schimmer, Christian Beisel, Lara Bernasconi, Anne Bertolini, Bernd Bodenmiller, Ximena Bonilla, Lars Bosshard, Byron Calgua, Ruben Casanova, Stéphane Chevrier, Natalia Chicherova, Maya D’Costa, Esther Danenberg, Natalie J. Davidson, Monica-Andreea Drăgan, Reinhard Dummer, Stefanie Engler, Martin Erkens, Katja Eschbach, Cinzia Esposito, André Fedier, Pedro Ferreira, Joanna Ficek, Anja Frei, Bruno S. Frey, Sandra Goetze, Linda Grob, Gabriele Gut, Detlef Günther, Martina Haberecker, Pirmin Haeuptle, Sylvia Herter, René Holtackers, Tamara Huesser, Alexander Immer, Anja Irmisch, Andrea Jacobs, Tim M. Jaeger, Katharina Jahn, Alva Rani James, Philip Jermann, André Kahles, Abdullah Kahraman, Viktor H. Koelzer, Werner Kuebler, Jack Kuipers, Christian P. Kunze, Christian Kurzeder, Kjong-Van Lehmann, Mitchell Levesque, Ulrike Lischetti, Sebastian Lugert, Gerd Maass, Markus G. Manz, Philipp Markolin, Martin Mehnert, Julien Mena, Julian M. Metzler, Nicola Miglino, Emanuela S. Milani, Holger Moch, Simone Muenst, Riccardo Murri, Charlotte K.Y. Ng, Stefan Nicolet, Marta Nowak, Mónica Núñez López, Patrick G. A. Pedrioli, Lucas Pelkmans, Salvatore Piscuoglio, Michael Prummer, Natalie Rimmer, Mathilde Ritter, Christian Rommel, María L. Rosano-González, Gunnar Rätsch, Natascha Santacroce, Jacobo Sarabia del Castillo, Ramona Schlenker, Petra Schwalie, Severin Schwan, Tobias Schär, Gabriela Senti, Wenguang Shao and 34 more - Nature Communications 2023 cited by 44
