Kathryn S. Lilley
Active 1992–2026
- 151
- Papers
- 29,067
- Citations
- 87
- h-index
- 146
- i10-index
Citations
Citation sources
Countries
Institutions
- University of Cambridge1.4%
- Centre National de la Recherche Scientifique0.8%
- Harvard University0.8%
- Inserm0.6%
- Stanford University0.5%
- University of Oxford0.5%
- Other95.4%
Fields
- Biochemistry, Genetics and Molecular Biology48.5%
- Medicine17.5%
- Chemistry11.5%
- Neuroscience8.6%
- Agricultural and Biological Sciences5.2%
- Immunology and Microbiology3.4%
- Other5.3%
Topics
- Advanced Proteomics Techniques and Applications4.8%
- Metabolomics and Mass Spectrometry Studies2.5%
- RNA and protein synthesis mechanisms2.4%
- RNA Research and Splicing2.3%
- RNA modifications and cancer2.3%
- Mass Spectrometry Techniques and Applications2.2%
- Other83.5%
Coauthors
- Lisa M. Breckels20
- Laurent Gatto18
- Oliver M. Crook16
- Michael J. Deery14
- Natasha A. Karp13
- Vadim Demichev12
- Markus Ralser11
- Christoph B. Messner10
- Paul Dupree10
- Anne E. Willis9
- Claire M. Mulvey8
- Michael Mülleder8
- Tom Smith8
- Aikaterini Geladaki7
- Matthew White7
- Rayner M. L. Queiroz7
- Anja Freiwald6
- Daniela Ludwig6
- Eneko Villanueva6
- Robert F. Harvey6
- Spyros I. Vernardis6
- Svenja Hester6
- Tim J. Stevens6
- Tom Dunkley6
All papers
- DIA-NN: neural networks and interference correction enable deep proteome coverage in high throughput
Authors: Vadim Demichev, Christoph B. Messner, Spyros I. Vernardis, Kathryn S. Lilley, Markus Ralser - Nature Methods 2019 cited by 3,387
- A subcellular map of the human proteome
Authors: Peter Thul, Lovisa Åkesson, Mikaela Wiking, Diana Mahdessian, Aikaterini Geladaki, Hammou Ait Blal, Tove Alm, Anna Asplund, Lars Björk, Lisa M. Breckels, Anna Bäckström, Frida Danielsson, Linn Fagerberg, Jenny Fall, Laurent Gatto, Christian Gnann, Sophia Hober, Martin Hjelmare, Fredric Johansson, Sunjae Lee, Cecilia Lindskog, Jan Mulder, Claire M. Mulvey, Peter Nilsson, Per Oksvold, Johan Rockberg, Rutger Schutten, Jochen M. Schwenk, Åsa Sivertsson, Evelina Sjöstedt, Marie Skogs, Charlotte Stadler, Devin P. Sullivan, Hanna Tegel, Casper F. Winsnes, Cheng Zhang, Martin Zwahlen, Adil Mardinoğlu, Fredrik Pontén, Kalle von Feilitzen, Kathryn S. Lilley, Mathias Uhlén, Emma Lundberg - Science 2017 cited by 3,023
- dia-PASEF data analysis using FragPipe and DIA-NN for deep proteomics of low sample amounts
Authors: Vadim Demichev, Łukasz Szyrwiel, Fengchao Yu, Guo Ci Teo, George Rosenberger, Agathe Niewienda, Daniela Ludwig, Jens Decker, Stephanie Kaspar‐Schoenefeld, Kathryn S. Lilley, Michael Mülleder, Alexey I. Nesvizhskii, Markus Ralser - Nature Communications 2022 cited by 425
- N1-methylpseudouridylation of mRNA causes +1 ribosomal frameshifting
Authors: Thomas E. Mulroney, Tuija Pöyry, Juan Carlos Yam‐Puc, Maria Rust, Robert F. Harvey, Lajos Kalmár, Emily C. Horner, Lucy H. Booth, Alex Ferreira, Mark Stoneley, Ritwick Sawarkar, Alexander J. Mentzer, Kathryn S. Lilley, C. Mark Smales, Tobias von der Haar, Lance Turtle, Susanna Dunachie, Paul Klenerman, James Thaventhiran, Anne E. Willis - Nature 2023 cited by 210
- Understudied proteins: opportunities and challenges for functional proteomics
Authors: Georg Kustatscher, Tom Collins, Anne‐Claude Gingras, Tiannan Guo, Henning Hermjakob, Trey Ideker, Kathryn S. Lilley, Emma Lundberg, Edward M. Marcotte, Markus Ralser, Juri Rappsilber - Nature Methods 2022 cited by 221
- Comprehensive identification of RNA–protein interactions in any organism using orthogonal organic phase separation (OOPS)
Authors: Rayner M. L. Queiroz, Tom Smith, Eneko Villanueva, Maria Martí-Solano, Mie Monti, Mariavittoria Pizzinga, Dan-Mircea Mirea, Manasa Ramakrishna, Robert F. Harvey, Veronica Dezi, Gavin H. Thomas, Anne E. Willis, Kathryn S. Lilley - Nature Biotechnology 2019 cited by 405
- Ultra-High-Throughput Clinical Proteomics Reveals Classifiers of COVID-19 Infection
Authors: Christoph B. Messner, Vadim Demichev, Daniel Wendisch, Laura Michalick, Matthew White, Anja Freiwald, Kathrin Textoris‐Taube, Spyros I. Vernardis, Anna-Sophia Egger, Marco Kreidl, Daniela Ludwig, Christiane Kilian, Federica Agostini, Aleksej Zelezniak, Charlotte Thibeault, Moritz Pfeiffer, Stefan Hippenstiel, Andreas C. Hocke, Christof von Kalle, Archie Campbell, Caroline Hayward, David J. Porteous, Riccardo E. Marioni, Claudia Langenberg, Kathryn S. Lilley, Wolfgang M. Kuebler, Michael Mülleder, Christian Drosten, Norbert Suttorp, Martin Witzenrath, Florian Kurth, Leif Erik Sander, Markus Ralser - Cell Systems 2020 cited by 615
- A Comprehensive Subcellular Atlas of the Toxoplasma Proteome via hyperLOPIT Provides Spatial Context for Protein Functions
Authors: Konstantin Barylyuk, Luděk Kořený, Huiling Ke, Simon Butterworth, Oliver M. Crook, Imen Lassadi, Vipul Gupta, Eelco C. Tromer, Tobias Mourier, Tim J. Stevens, Lisa M. Breckels, Arnab Pain, Kathryn S. Lilley, Ross F. Waller - Cell Host & Microbe 2020 cited by 361
- Ultra-fast proteomics with Scanning SWATH
Authors: Christoph B. Messner, Vadim Demichev, Nic Bloomfield, Jason Yu, Matthew White, Marco Kreidl, Anna-Sophia Egger, Anja Freiwald, Gordana Ivosev, Fras Wasim, Aleksej Zelezniak, Linda Jürgens, Norbert Suttorp, Leif Erik Sander, Florian Kurth, Kathryn S. Lilley, Michael Mülleder, Stephen Tate, Markus Ralser - Nature Biotechnology 2021 cited by 327
- Cardioprotection by S-nitrosation of a cysteine switch on mitochondrial complex I
Authors: Edward T. Chouchani, Carmen Methner, Sergiy M. Nadtochiy, Angela Logan, Victoria R. Pell, Shujing Ding, Andrew M. James, Helena M. Cochemé, Johannes Reinhold, Kathryn S. Lilley, Linda Partridge, Ian M. Fearnley, Alan J. Robinson, Richard C. Hartley, Robin A.J. Smith, Thomas Krieg, Paul S. Brookes, Michael P. Murphy - Nature Medicine 2013 cited by 614
- MSnbase-an R/Bioconductor package for isobaric tagged mass spectrometry data visualization, processing and quantitation
Authors: Laurent Gatto, Kathryn S. Lilley - Bioinformatics, Bioinform. 2011 cited by 424
- The phage abortive infection system, ToxIN, functions as a protein–RNA toxin–antitoxin pair
Authors: Peter C. Fineran, Tim R. Blower, I. J. Foulds, David P. Humphreys, Kathryn S. Lilley, George P. C. Salmond - National Academy of Sciences, Proceedings of the National Academy of Sciences 2009 cited by 566
- Combining LOPIT with differential ultracentrifugation for high-resolution spatial proteomics
Authors: Aikaterini Geladaki, Nina Kočevar Britovšek, Lisa M. Breckels, Tom Smith, Owen L. Vennard, Claire M. Mulvey, Oliver M. Crook, Laurent Gatto, Kathryn S. Lilley - Nature Communications 2019 cited by 231
- Subcellular proteomics
Authors: Josie A. Christopher, Charlotte Stadler, Claire E. Martin, Marcel Morgenstern, Yanbo Pan, Cora N. Betsinger, David Rattray, Diana Mahdessian, Anne‐Claude Gingras, Bettina Warscheid, Janne Lehtiö, Ileana M. Cristea, Leonard J. Foster, Andrew Emili, Kathryn S. Lilley - Nature Reviews Methods Primers 2021 cited by 126
- Unresolved stalled ribosome complexes restrict cell-cycle progression after genotoxic stress
Authors: Mark Stoneley, Robert F. Harvey, Thomas E. Mulroney, Ryan Mordue, Rebekah Jukes‐Jones, Kelvin Cain, Kathryn S. Lilley, Ritwick Sawarkar, Anne E. Willis - Molecular Cell 2022 cited by 101
- Cryptosporidium uses multiple distinct secretory organelles to interact with and modify its host cell
Authors: Amandine Guérin, Katherine M. Strelau, Konstantin Barylyuk, Bethan A. Wallbank, Laurence Berry, Oliver M. Crook, Kathryn S. Lilley, Ross F. Waller, Boris Striepen - Cell Host & Microbe 2023 cited by 94
- The proteomic landscape of genome-wide genetic perturbations
Authors: Christoph B. Messner, Vadim Demichev, Julia Muenzner, Simran Kaur Aulakh, Natalie Barthel, Annika Röhl, Lucía Herrera-Domínguez, Anna-Sophia Egger, Stephan Kamrad, Jing Hou, Guihong Tan, Oliver Lemke, Enrica Calvani, Łukasz Szyrwiel, Michael Mülleder, Kathryn S. Lilley, Charles Boone, Georg Kustatscher, Markus Ralser - Cell 2023 cited by 84
- Operation of a TCA cycle subnetwork in the mammalian nucleus
Authors: Eleni Kafkia, Amparo Andrés‐Pons, Kerstin Ganter, Markus Seiler, Tom Smith, Anna Andrejeva, Paula Jouhten, Filipa Pereira, Catarina Franco, Anna Kuroshchenkova, Sergio Leone, Ritwick Sawarkar, Rebecca H. Boston, James Thaventhiran, Judith B. Zaugg, Kathryn S. Lilley, Christophe Lancrin, Martin Beck, Kiran Raosaheb Patil - Science Advances 2022 cited by 76
- Mitochondrial dysfunction in schizophrenia: evidence for compromised brain metabolism and oxidative stress
Authors: Sudhakaran Prabakaran, Jane E. SWATTON, Margaret M. Ryan, Stephen J. Huffaker, JT-J Huang, Julian L. Griffin, Matthew T. Wayland, Tom P. Freeman, Frank Dudbridge, Kathryn S. Lilley, Natasha A. Karp, Svenja Hester, Dmitri Tkachev, Michael L. Mimmack, Robert H. Yolken, Maree J. Webster, Ε. Fuller Torrey, Sabine Bahn - Molecular Psychiatry 2004 cited by 972
- System-wide analysis of RNA and protein subcellular localization dynamics
Authors: Eneko Villanueva, Tom Smith, Mariavittoria Pizzinga, Mohamed Elzek, Rayner M. L. Queiroz, Robert F. Harvey, Lisa M. Breckels, Oliver M. Crook, Mie Monti, Veronica Dezi, Anne E. Willis, Kathryn S. Lilley - Nature Methods 2023 cited by 59
- Spatial proteomics defines the content of trafficking vesicles captured by golgin tethers
Authors: John J. H. Shin, Oliver M. Crook, Alicia C. Borgeaud, Jérôme Cattin‐Ortolá, Sew‐Yeu Peak‐Chew, Lisa M. Breckels, Alison K. Gillingham, Jessica Chadwick, Kathryn S. Lilley, Sean Munro - Nature Communications 2020 cited by 88
- Tracking the embryonic stem cell transition from ground state pluripotency
Authors: Tüzer Kalkan, Nelly Olova, Mila Roode, Carla Mulas, Heather Lee, Isabelle Nett, Hendrik Marks, Rachael Walker, Hendrik G. Stunnenberg, Kathryn S. Lilley, Jennifer Nichols, Wolf Reik, Paul Bertone, Austin Smith - Development 2017 cited by 312
- Toward a Comprehensive Map of the Effectors of Rab GTPases
Authors: Alison K. Gillingham, Rita Sinka, Isabel Torres, Kathryn S. Lilley, Sean Munro - Developmental Cell 2014 cited by 293
- Human Urinary Exosomes as Innate Immune Effectors
Authors: Thomas F. Hiemstra, Philip D. Charles, Tannia Gracia, Svenja Hester, Laurent Gatto, Rafia S. Al‐Lamki, R. Andrés Floto, Ya Su, Jeremy N. Skepper, Kathryn S. Lilley, Fiona E. Karet - Journal of the American Society of Nephrology 2014 cited by 168
