Anne‐Claude Gingras
Active 1994–2025
- Also published as
- Anne-Claude Gingras
- 264
- Papers
- 54,721
- Citations
- 116
- h-index
- 255
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology65.7%
- Medicine20.6%
- Chemistry4.6%
- Neuroscience2.7%
- Immunology and Microbiology2.4%
- Agricultural and Biological Sciences1.5%
- Other2.5%
Topics
- RNA Research and Splicing3.9%
- RNA and protein synthesis mechanisms3.4%
- RNA modifications and cancer3.2%
- PI3K/AKT/mTOR signaling in cancer2.8%
- Ubiquitin and proteasome pathways2.8%
- Protein Degradation and Inhibitors2.2%
- Other81.7%
Coauthors
- Nahum Sonenberg48
- Zhen‐Yuan Lin41
- Brian Raught35
- Karen Colwill31
- Brett Larsen23
- Cassandra J. Wong20
- Jean‐Philippe Lambert19
- Bhavisha Rathod18
- Kento T. Abe17
- Payman Samavarchi‐Tehrani16
- Allison McGeer15
- James D.R. Knight15
- Alexey I. Nesvizhskii13
- Frank Sicheri13
- Geoffrey G. Hesketh13
- Hyungwon Choi13
- Mikko Taipale12
- Reuben Samson12
- Ruedi Aebersold12
- Samira Mubareka12
- Benjamin J. Blencowe10
- Gary Chao10
- Jeffrey L. Wrana10
- Ji‐Young Youn10
All papers
- The CRAPome: a contaminant repository for affinity purification–mass spectrometry data
Authors: Dattatreya Mellacheruvu, Zachary Wright, Amber L. Couzens, Jean‐Philippe Lambert, Nicole St‐Denis, Li Tuo, Yana Miteva, Simon Hauri, Mihaela E. Sardiu, Teck Yew Low, Vincentius A. Halim, Richard D. Bagshaw, Nina C. Hubner, Abdallah Al-Hakim, Annie Bouchard, Denis Faubert, Damian Fermin, Wade H. Dunham, Marilyn Goudreault, Zhen-Yuan Lin, Beatriz Gonzalez Badillo, Tony Pawson, Daniel Durocher, Benoit Coulombe, Ruedi Aebersold, Giulio Superti‐Furga, Jacques Colinge, Albert J. R. Heck, Hyungwon Choi, Matthias Gstaiger, Shabaz Mohammed, Ileana M. Cristea, Keiryn L. Bennett, Mike P Washburn, Brian Raught, Rob M. Ewing, Anne‐Claude Gingras, Alexey I. Nesvizhskii - Nature Methods 2013 cited by 1,804
- A proximity-dependent biotinylation map of a human cell
Authors: Christopher D. Go, James D.R. Knight, Archita Rajasekharan, Bhavisha Rathod, Geoffrey G. Hesketh, Kento T. Abe, Ji‐Young Youn, Payman Samavarchi‐Tehrani, Hui Zhang, Lucie Y. Zhu, Evelyn Popiel, Jean‐Philippe Lambert, Étienne Coyaud, Sally W.T. Cheung, Dushyandi Rajendran, Cassandra J. Wong, Hana Antonická, Laurence Pelletier, Alexander F. Palazzo, Eric A. Shoubridge, Brian Raught, Anne‐Claude Gingras - Nature 2021 cited by 497
- A global genetic interaction network maps a wiring diagram of cellular function
Authors: Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Ušaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Ušaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noël Malod‐Dognin, Vuk Janjić, Nataša Pržulj, Olga G. Troyanskaya, Igor Štagljar, Tian Xia, Yoshikazu Ohya, Anne‐Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone - Science 2016 cited by 1,418
- Properties of Stress Granule and P-Body Proteomes
Authors: Ji‐Young Youn, Boris J.A. Dyakov, Jianping Zhang, James D.R. Knight, Robert M. Vernon, Julie D. Forman‐Kay, Anne‐Claude Gingras - Molecular Cell 2019 cited by 477
- Histone Recognition and Large-Scale Structural Analysis of the Human Bromodomain Family
Authors: P. Filippakopoulos, S. Picaud, Maria Mangos, Tracy Keates, Jean‐Philippe Lambert, Dalia Baršytė-Lovejoy, I. Felletar, Rudolf Volkmer, Susanne Müller, Tony Pawson, Anne‐Claude Gingras, C.H. Arrowsmith, Stefan Knapp - Cell 2012 cited by 1,777
- High-Density Proximity Mapping Reveals the Subcellular Organization of mRNA-Associated Granules and Bodies
Authors: Ji‐Young Youn, Wade H. Dunham, Seo Jung Hong, James D.R. Knight, Mikhail Bashkurov, Ginny I. Chen, Halil Bagci, Bhavisha Rathod, Graham MacLeod, Simon Eng, Stéphane Angers, Quaid Morris, Marc R. Fabian, Jean‐François Côté, Anne‐Claude Gingras - Molecular Cell 2018 cited by 820
- SAINTexpress: Improvements and additional features in Significance Analysis of INTeractome software
Authors: Guoci Teo, Guomin Liu, Jianping Zhang, Alexey I. Nesvizhskii, Anne‐Claude Gingras, Hyungwon Choi - Journal of Proteomics 2013 cited by 749
- The shieldin complex mediates 53BP1-dependent DNA repair
Authors: Sylvie M. Noordermeer, Salomé Adam, Dheva Setiaputra, Marco Barazas, Stephen J. Pettitt, Alexanda K. Ling, Michele Olivieri, Alejandro Álvarez-Quilón, Nathalie Moatti, Michal Zimmermann, Stefano Annunziato, Dragomir B. Krastev, Feifei Song, Inger Brandsma, Jessica Frankum, Rachel Brough, Alana Sherker, Sébastien Landry, Rachel K. Szilard, Meagan Munro, Andrea McEwan, Théo Goullet de Rugy, Zhen‐Yuan Lin, Traver Hart, Jason Moffat, Anne‐Claude Gingras, Alberto Martín, Haico van Attikum, Jos Jonkers, Christopher J. Lord, Sven Rottenberg, Daniel Durocher - Nature 2018 cited by 675
- Multi-laboratory assessment of reproducibility, qualitative and quantitative performance of SWATH-mass spectrometry
Authors: Ben C. Collins, Christie L. Hunter, Yansheng Liu, Birgit Schilling, George Rosenberger, Samuel L. Bader, Daniel W. Chan, Bradford W. Gibson, Anne‐Claude Gingras, Jason M. Held, Mio Hirayama‐Kurogi, Guixue Hou, Christoph Krisp, Brett Larsen, Liang Lin, Siqi Liu, Mark P. Molloy, Robert L. Moritz, Sumio Ohtsuki, Ralph Schlapbach, Nathalie Selevsek, Stefani N. Thomas, Shin‐Cheng Tzeng, Hui Zhang, Ruedi Aebersold - Nature Communications 2017 cited by 617
- Understudied proteins: opportunities and challenges for functional proteomics
Authors: Georg Kustatscher, Tom Collins, Anne‐Claude Gingras, Tiannan Guo, Henning Hermjakob, Trey Ideker, Kathryn S. Lilley, Emma Lundberg, Edward M. Marcotte, Markus Ralser, Juri Rappsilber - Nature Methods 2022 cited by 221
- DIA-Umpire: comprehensive computational framework for data-independent acquisition proteomics
Authors: Chih‐Chiang Tsou, Dmitry M. Avtonomov, Brett Larsen, Monika Tucholska, Hyungwon Choi, Anne‐Claude Gingras, Alexey I. Nesvizhskii - Nature Methods 2015 cited by 695
- Regulation of 4E-BP1 phosphorylation: a novel two-step mechanism
Authors: Anne‐Claude Gingras, Steven P. Gygi, Brian Raught, Roberto D. Polakiewicz, Robert T. Abraham, Merl F. Hoekstra, Ruedi Aebersold, Nahum Sonenberg - Genes & Development 1999 cited by 1,336
- Systematic mapping of nuclear domain-associated transcripts reveals speckles and lamina as hubs of functionally distinct retained introns
Authors: A. Rasim Barutcu, Mingkun Wu, Ulrich Braunschweig, Boris J.A. Dyakov, Z. David Luo, Kyle M. Turner, Tanja Durbic, Zhen‐Yuan Lin, Robert J. Weatheritt, Philipp G. Maass, Anne‐Claude Gingras, Benjamin J. Blencowe - Molecular Cell 2022 cited by 122
- A High-Density Human Mitochondrial Proximity Interaction Network
Authors: Hana Antonická, Zhen‐Yuan Lin, Alexandre Janer, Mari J. Aaltonen, Woranontee Weraarpachai, Anne‐Claude Gingras, Eric A. Shoubridge - Cell Metabolism 2020 cited by 211
- Identification and functional characterization of transcriptional activators in human cells
Authors: Nader Alerasool, He Leng, Zhen‐Yuan Lin, Anne‐Claude Gingras, Mikko Taipale - Molecular Cell 2022 cited by 132
- Persistence of serum and saliva antibody responses to SARS-CoV-2 spike antigens in COVID-19 patients
Authors: Baweleta Isho, Kento T. Abe, Michelle Zuo, Alainna Jamal, Bhavisha Rathod, Jenny H. Wang, Zhijie Li, Gary Chao, Olga L. Rojas, Yeo Myong Bang, Annie Pu, Natasha Christie-Holmes, Christian Gervais, Derek F. Ceccarelli, Payman Samavarchi‐Tehrani, Furkan Guvenc, Patrick Budylowski, Angel Li, Aimee Paterson, Feng Yun Yue, Lina M. Marin, Lauren Caldwell, Jeffrey L. Wrana, Karen Colwill, Frank Sicheri, Samira Mubareka, Scott D. Gray‐Owen, Steven J. Drews, Walter L. Siqueira, Miriam Barrios‐Rodiles, Mario Ostrowski, James M. Rini, Yves Durocher, Allison McGeer, Jennifer L. Gommerman, Anne‐Claude Gingras - Science Immunology 2020 cited by 919
- SAINT: probabilistic scoring of affinity purification–mass spectrometry data
Authors: Hyungwon Choi, Brett Larsen, Zhen-Yuan Lin, Ashton Breitkreutz, Dattatreya Mellacheruvu, Damian Fermin, Zhaohui Qin, Mike Tyers, Anne‐Claude Gingras, Alexey I. Nesvizhskii - Nature Methods 2010 cited by 831
- A Dynamic Protein Interaction Landscape of the Human Centrosome-Cilium Interface
Authors: Gagan D. Gupta, Étienne Coyaud, João Gonçalves, Bahareh A. Mojarad, Yi Liu, Qianzhu Wu, Ladan Gheiratmand, David Comartin, Johnny M. Tkach, Sally W.T. Cheung, Mikhail Bashkurov, Monica Hasegan, James D.R. Knight, Zhen‐Yuan Lin, Markus Schueler, Friedhelm Hildebrandt, Jason Moffat, Anne‐Claude Gingras, Brian Raught, Laurence Pelletier - Cell 2015 cited by 575
- A Quantitative Chaperone Interaction Network Reveals the Architecture of Cellular Protein Homeostasis Pathways
Authors: Mikko Taipale, George Tucker, Jian Peng, Irina Krykbaeva, Zhen-Yuan Lin, Brett Larsen, Hyungwon Choi, Bonnie Berger, Anne‐Claude Gingras, Susan Lindquist - Cell 2014 cited by 420
- The Genetic Landscape of a Cell
Authors: Michael Costanzo, Anastasia Baryshnikova, Jeremy Bellay, Yungil Kim, Eric D. Spear, Carolyn S. Sevier, Huiming Ding, Judice L.Y. Koh, Kiana Toufighi, Sara Mostafavi, Jeany Prinz, Robert P. St.Onge, Benjamin VanderSluis, Taras Makhnevych, Franco J. Vizeacoumar, Solmaz Alizadeh, Sondra Bahr, Renée L. Brost, Yiqun Chen, Murat Cokol, Raamesh Deshpande, Zhijian Li, Zhen-Yuan Lin, Wendy Liang, Michaela Marback, Jadine Paw, Bryan-Joseph San Luis, Ermira Shuteriqi, Amy H.Y. Tong, Nydia van Dyk, Iain M. Wallace, Joseph A. Whitney, Matthew T. Weirauch, Guoqing Zhong, Hongwei Zhu, Walid A. Houry, Michael Brudno, Sasan Ragibizadeh, Balázs Papp, Csaba Pál, Frederick P. Roth, Guri Giaever, Corey Nislow, Olga G. Troyanskaya, Howard Bussey, Gary D. Bader, Anne‐Claude Gingras, Quaid Morris, Philip M. Kim, Chris A. Kaiser, Chad L. Myers, Brenda Andrews, Charles Boone - Science 2010 cited by 2,265
- Robust, reproducible and quantitative analysis of thousands of proteomes by micro-flow LC–MS/MS
Authors: Yangyang Bian, Runsheng Zheng, Florian Bayer, Cassandra J. Wong, Yun-Chien Chang, Chen Meng, Daniel P. Zolg, Maria Reinecke, Jana Zecha, Svenja Wiechmann, Stephanie Heinzlmeir, Johannes Scherr, Bernhard Hemmer, Mike Baynham, Anne‐Claude Gingras, Alexander Boychenko, Bernhard Küster - Nature Communications 2020 cited by 362
- History of protein–protein interactions: From egg‐white to complex networks
Authors: Pascal Falter‐Braun, Anne‐Claude Gingras - PROTEOMICS 2012 cited by 309
- Subcellular proteomics
Authors: Josie A. Christopher, Charlotte Stadler, Claire E. Martin, Marcel Morgenstern, Yanbo Pan, Cora N. Betsinger, David Rattray, Diana Mahdessian, Anne‐Claude Gingras, Bettina Warscheid, Janne Lehtiö, Ileana M. Cristea, Leonard J. Foster, Andrew Emili, Kathryn S. Lilley - Nature Reviews Methods Primers 2021 cited by 126
- Getting to know the neighborhood: using proximity-dependent biotinylation to characterize protein complexes and map organelles
Authors: Anne‐Claude Gingras, Kento T. Abe, Brian Raught - Current Opinion in Chemical Biology 2018 cited by 314
