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Andrew Emili

Active 1994–2026

160
Papers
35,663
Citations
88
h-index
149
i10-index

Citations

Citations per year for Andrew Emili1971: 1 citations1973: 1 citations1976: 1 citations1982: 1 citations1983: 1 citations1984: 3 citations1986: 1 citations1988: 1 citations1989: 1 citations1994: 4 citations1995: 11 citations1996: 8 citations1997: 9 citations1998: 9 citations1999: 13 citations2000: 15 citations2001: 26 citations2002: 39 citations2003: 101 citations2004: 179 citations2005: 371 citations2006: 447 citations2007: 612 citations2008: 608 citations2009: 599 citations2010: 560 citations2011: 536 citations2012: 584 citations2013: 542 citations2014: 481 citations2015: 483 citations2016: 434 citations2017: 464 citations2018: 394 citations2019: 943 citations2020: 970 citations2021: 920 citations2022: 801 citations2023: 573 citations2024: 874 citations2025: 452 citations2026: 20 citations1972: no citations, so this year is not shown1974–1975: no citations, so these years are not shown1977–1981: no citations, so these years are not shown1985: no citations, so this year is not shown1987: no citations, so this year is not shown1990–1993: no citations, so these years are not shown

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 5,206 citing papers, 29.9% of this breakdownChina: 1,735 citing papers, 10% of this breakdownUnited Kingdom: 1,248 citing papers, 7.2% of this breakdownCanada: 1,211 citing papers, 6.9% of this breakdownGermany: 1,078 citing papers, 6.2% of this breakdownFrance: 628 citing papers, 3.6% of this breakdownItaly: 444 citing papers, 2.5% of this breakdownSwitzerland: 427 citing papers, 2.4% of this breakdownJapan: 426 citing papers, 2.4% of this breakdownSpain: 398 citing papers, 2.3% of this breakdownAustralia: 354 citing papers, 2% of this breakdownNetherlands: 341 citing papers, 2% of this breakdown
0%29.9%Other 22.6%

Institutions

Fields

  • Biochemistry, Genetics and Molecular Biology63.5%
  • Medicine13.6%
  • Chemistry4.6%
  • Materials Science4.2%
  • Computer Science3%
  • Immunology and Microbiology2.6%
  • Other8.5%

Topics

  • Bioinformatics and Genomic Networks6%
  • Genomics and Chromatin Dynamics3.5%
  • RNA and protein synthesis mechanisms3.1%
  • RNA Research and Splicing3%
  • RNA modifications and cancer2.8%
  • Computational Drug Discovery Methods2.2%
  • Other79.4%

Coauthors

All papers

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  1. Enrichment Map: A Network-Based Method for Gene-Set Enrichment Visualization and Interpretation

    Authors: Daniele Merico, Ruth Isserlin, Oliver Stueker, Andrew Emili, Gary D. Bader - PLoS ONE 2010 cited by 2,441

  2. Nanoparticle Size and Surface Chemistry Determine Serum Protein Adsorption and Macrophage Uptake

    Authors: Carl Walkey, Jonathan B. Olsen, Hongbo Guo, Andrew Emili, Warren C. W. Chan - Journal of the American Chemical Society 2011 cited by 1,908

  3. Quantifying E. coli Proteome and Transcriptome with Single-Molecule Sensitivity in Single Cells

    Authors: Yuichi Taniguchi, Paul Choi, Gene‐Wei Li, Huiyi Chen, Mohan Babu, Jeremy Hearn, Andrew Emili, X. Sunney Xie - Science 2010 cited by 2,118

  4. Global landscape of protein complexes in the yeast Saccharomyces cerevisiae

    Authors: Nevan J. Krogan, Gerard Cagney, Haiyuan Yu, Gouqing Zhong, Xinghua Guo, Alexandr Ignatchenko, Joyce Li, Shuye Pu, Nira Datta, Aaron Tikuisis, Thanuja Punna, José M. Peregrín-Alvarez, Michael Shales, Xin Zhang, Michael Davey, Mark D. Robinson, Alberto Paccanaro, James E. Bray, Anthony Sheung, Bryan K. Beattie, Dawn P. Richards, Veronica Canadien, Atanas I. Lalev, Frank L. Mena, Peter Wong, Andrei Starostine, Myra M. Canete, James Vlasblom, Samuel Wu, Chris Orsi, Sean R. Collins, Shamanta Chandran, Robin Haw, Jennifer J. Rilstone, Kiran Gandi, Natalie Thompson, Gabe Musso, Peter St.Onge, Shaun Ghanny, Mandy Hiu Yi Lam, Gareth Butland, Amin M. Altaf-Ul, Shigehiko Kanaya, Ali Shilatifard, Erin K. O’Shea, Jonathan S. Weissman, C. James Ingles, Timothy R. Hughes, John Parkinson, Mark Gerstein, Shoshana J. Wodak, Andrew Emili, Jack Greenblatt - Nature 2006 cited by 2,992

  5. Interaction of tau with HNRNPA2B1 and N6-methyladenosine RNA mediates the progression of tauopathy

    Authors: Lulu Jiang, Weiwei Lin, Cheng Zhang, Peter E.A. Ash, Mamta Verma, Julian Kwan, Emily van Vliet, Zhuo Yang, Anna Lourdes Cruz, Samantha Boudeau, Brandon F. Maziuk, Shuwen Lei, Jaehyup Song, Victor E. Alvarez, Stacy Hovde, Jose F. Abisambra, Min‐Hao Kuo, Nicholas M. Kanaan, Melissa E. Murray, John F. Crary, Jian Zhao, Ji‐Xin Cheng, Leonard Petrucelli, Li Hu, Andrew Emili, Benjamin Wolozin - Molecular Cell 2021 cited by 191

  6. A Census of Human Soluble Protein Complexes

    Authors: Pierre C. Havugimana, Traver Hart, Tamás Nepusz, Haixuan Yang, Andrei L. Turinsky, Zhihua Li, Peggy I. Wang, Daniel R. Boutz, Vincent Fong, Sadhna Phanse, Mohan Babu, Stephanie A. Craig, Pingzhao Hu, Cuihong Wan, James Vlasblom, V.-u.-N. Dar, Alexandr Bezginov, Greg Clark, Gabriel C. Wu, Shoshana J. Wodak, Elisabeth R.M. Tillier, Alberto Paccanaro, Edward M. Marcotte, Andrew Emili - Cell 2012 cited by 913

  7. Panorama of ancient metazoan macromolecular complexes

    Authors: Cuihong Wan, Blake Borgeson, Sadhna Phanse, Fan Tu, Kevin Drew, Greg Clark, Xuejian Xiong, Olga Kagan, Julian Kwan, Alexandr Bezginov, Kyle Chessman, Swati Pal, Graham L. Cromar, Ophelia Papoulas, Zuyao Ni, Daniel R. Boutz, Snejana Stoilova, Pierre C. Havugimana, Xinghua Guo, Ramy Malty, Mihail Sarov, Jack Greenblatt, Mohan Babu, W. Brent Derry, Elisabeth R.M. Tillier, John B. Wallingford, John Parkinson, Edward M. Marcotte, Andrew Emili - Nature 2015 cited by 586

  8. Organoids Model Transcriptional Hallmarks of Oncogenic KRAS Activation in Lung Epithelial Progenitor Cells

    Authors: Antonella F. M. Dost, Aaron L. Moye, Marall Vedaie, Linh M. Tran, Eileen Fung, Dar Heinze, Carlos Villacorta-Martín, Jessie Huang, Ryan Hekman, Julian Kwan, Benjamin C. Blum, Sharon M. Louie, Samuel P. Rowbotham, Julio Sainz de Aja, Mary Piper, Preetida J. Bhetariya, Roderick T. Bronson, Andrew Emili, Gustavo Mostoslavsky, Gregory A. Fishbein, William D. Wallace, Kostyantyn Krysan, Steven M. Dubinett, Jane Yanagawa, Darrell N. Kotton, Carla F. Kim - Cell stem cell 2020 cited by 169

  9. Protein-protein interaction networks: probing disease mechanisms using model systems

    Authors: Uroš Kuzmanov, Andrew Emili - Genome Medicine 2013 cited by 202

  10. Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles

    Authors: Carl Walkey, Jonathan B. Olsen, Fayi Song, Rong Liu, Hongbo Guo, D. Wesley H. Olsen, Yoram Cohen, Andrew Emili, Warren C. W. Chan - ACS Nano 2014 cited by 800

  11. Subcellular proteomics

    Authors: Josie A. Christopher, Charlotte Stadler, Claire E. Martin, Marcel Morgenstern, Yanbo Pan, Cora N. Betsinger, David Rattray, Diana Mahdessian, Anne‐Claude Gingras, Bettina Warscheid, Janne Lehtiö, Ileana M. Cristea, Leonard J. Foster, Andrew Emili, Kathryn S. Lilley - Nature Reviews Methods Primers 2021 cited by 126

  12. Patient-specific iPSCs carrying an SFTPC mutation reveal the intrinsic alveolar epithelial dysfunction at the inception of interstitial lung disease

    Authors: Konstantinos–Dionysios Alysandratos, Scott J. Russo, Anton Petcherski, Evan P. Taddeo, Rebeca Acín‐Pérez, Carlos Villacorta-Martín, Jenny Jean, Surafel Mulugeta, L. Raposo Rodríguez, Benjamin C. Blum, Ryan Hekman, Olivia T. Hix, Kasey Minakin, Marall Vedaie, Seunghyi Kook, Andrew Tilston-Lünel, Xaralabos Varelas, Jennifer Wambach, F. Sessions Cole, Aaron Hamvas, Lisa R. Young, Marc Liesa, Andrew Emili, Susan H. Guttentag, Orian S. Shirihai, Michael F. Beers, Darrell N. Kotton - Cell Reports 2021 cited by 111

  13. PDX-derived organoids model in vivo drug response and secrete biomarkers

    Authors: Ling Huang, Bruno Bockorny, Indranil Paul, Dipikaa Akshinthala, Pierre‐Olivier Frappart, Omar Gandarilla, Arindam Bose, Veronica Sanchez‐Gonzalez, Emily E. Rouse, Sylvain Lehoux, Nicole Pandell, Christine Lim, John G. Clohessy, Joseph E. Grossman, Raul S. González, Sofia Perea Del Pino, George Daaboul, Mandeep Sawhney, Steven D. Freedman, Alexander Kleger, Richard D. Cummings, Andrew Emili, Lakshmi Muthuswamy, Manuel Hidalgo, Senthil K. Muthuswamy - JCI Insight 2020 cited by 130

  14. Multiparameter functional diversity of human C2H2 zinc finger proteins

    Authors: Frank W. Schmitges, Ernest Radovani, Hamed S. Najafabadi, Marjan Barazandeh, Laura F. Campitelli, Yimeng Yin, Arttu Jolma, Guoqing Zhong, Hongbo Guo, Tharsan Kanagalingam, Wei Dai, Jussi Taipale, Andrew Emili, Jack Greenblatt, Timothy R. Hughes - Genome Research 2016 cited by 222

  15. Scalable multiplex co-fractionation/mass spectrometry platform for accelerated protein interactome discovery

    Authors: Pierre C. Havugimana, Raghuveera Kumar Goel, Sadhna Phanse, Ahmed Youssef, Dzmitry Padhorny, Sergei Kotelnikov, Dima Kozakov, Andrew Emili - Nature Communications 2022 cited by 79

  16. Navigating the Chaperone Network: An Integrative Map of Physical and Genetic Interactions Mediated by the Hsp90 Chaperone

    Authors: Rongmin Zhao, Mike Davey, Ya‐Chieh Hsu, Pia Kaplanek, Amy H.Y. Tong, Ainslie B. Parsons, Nevan J. Krogan, Gerard Cagney, Duy Mai, Jack Greenblatt, Charles Boone, Andrew Emili, Walid A. Houry - Cell 2005 cited by 831

  17. Characterization of the proteins released from activated platelets leads to localization of novel platelet proteins in human atherosclerotic lesions

    Authors: Judith A. Coppinger, Gerard Cagney, Sinéad Toomey, Thomas Kislinger, Orina Belton, James McRedmond, Dolores J. Cahill, Andrew Emili, Desmond J. Fitzgerald, Patricia B. Maguire - Blood 2003 cited by 814

  18. The protein organization of a red blood cell

    Authors: Wisath Sae-Lee, Caitlyn L McCafferty, Eric J. Verbeke, Pierre C. Havugimana, Ophelia Papoulas, Claire D. McWhite, John R. Houser, Kim Vanuytsel, George J. Murphy, Kevin Drew, Andrew Emili, David W. Taylor, Edward M. Marcotte - Cell Reports 2022 cited by 82

  19. Interaction network containing conserved and essential protein complexes in Escherichia coli

    Authors: Gareth Butland, José M. Peregrín-Alvarez, Joyce Li, Wehong Yang, Xiaochun Yang, Veronica Canadien, Andrei Starostine, Dawn P. Richards, Bryan K. Beattie, Nevan J. Krogan, Michael Davey, John Parkinson, Jack Greenblatt, Andrew Emili - Nature 2005 cited by 1,211

  20. Tissue subcellular fractionation and protein extraction for use in mass-spectrometry-based proteomics

    Authors: Brian Cox, Andrew Emili - Nature Protocols 2006 cited by 346

  21. The binary protein-protein interaction landscape of Escherichia coli

    Authors: Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca‐Koh, Suman Pakala, Sadhna Phanse, Arnaud Céol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz - Nature Biotechnology 2014 cited by 256

  22. Cotranscriptional Set2 Methylation of Histone H3 Lysine 36 Recruits a Repressive Rpd3 Complex

    Authors: Michael‐Christopher Keogh, Siavash K. Kurdistani, Stephanie A. Morris, S. Ahn, Vladimir Podolny, Sean R. Collins, Maya Schuldiner, K.‐D. HENRY CHIN, Thanuja Punna, Natalie Thompson, Charles Boone, Andrew Emili, Jonathan S. Weissman, Timothy R. Hughes, Brian D. Strahl, Michael Grunstein, Jack Greenblatt, Stephen Buratowski, Nevan J. Krogan - Cell 2005 cited by 811

  23. Poly(GR) interacts with key stress granule factors promoting its assembly into cytoplasmic inclusions

    Authors: Jinyoung Park, Yanwei Wu, Wei Shao, Tania F. Gendron, Sophie J. F. van der Spek, Grigorii Sultanakhmetov, Avik Basu, Paula Castellanos Otero, Caroline J. Jones, Karen Jansen‐West, Lillian M. Daughrity, Sadhna Phanse, Giulia del Rosso, Jimei Tong, Monica Castanedes‐Casey, Lulu Jiang, Jenna Libera, Björn Oskarsson, Dennis W. Dickson, David W. Sanders, Clifford P. Brangwynne, Andrew Emili, Benjamin Wolozin, Leonard Petrucelli, Yong‐Jie Zhang - Cell Reports 2023 cited by 28

  24. A Bayesian Networks Approach for Predicting Protein-Protein Interactions from Genomic Data

    Authors: Ronald Jansen, Haiyuan Yu, Dov Greenbaum, Yuval Kluger, Nevan J. Krogan, Sambath Chung, Andrew Emili, M Snyder, Jack Greenblatt, Mark Gerstein - Science 2003 cited by 1,281