litlas
Log inCreate account

Matthew W. Hahn

Active 2002–2025

Also published as
Matthew W Hahn
130
Papers
28,426
Citations
83
h-index
122
i10-index

Citations

Citations per year for Matthew W. Hahn1982: 1 citations1990: 1 citations1992: 1 citations1999: 4 citations2002: 1 citations2003: 4 citations2004: 16 citations2005: 36 citations2006: 69 citations2007: 115 citations2008: 238 citations2009: 253 citations2010: 201 citations2011: 235 citations2012: 242 citations2013: 248 citations2014: 259 citations2015: 296 citations2016: 351 citations2017: 326 citations2018: 408 citations2019: 890 citations2020: 1,018 citations2021: 993 citations2022: 720 citations2023: 691 citations2024: 896 citations2025: 403 citations2026: 13 citations1983–1989: no citations, so these years are not shown1991: no citations, so this year is not shown1993–1998: no citations, so these years are not shown2000–2001: no citations, so these years are not shown

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 3,509 citing papers, 24.8% of this breakdownChina: 1,660 citing papers, 11.8% of this breakdownUnited Kingdom: 1,133 citing papers, 8% of this breakdownGermany: 710 citing papers, 5% of this breakdownFrance: 643 citing papers, 4.6% of this breakdownCanada: 571 citing papers, 4% of this breakdownAustralia: 406 citing papers, 2.9% of this breakdownSpain: 367 citing papers, 2.6% of this breakdownSwitzerland: 365 citing papers, 2.6% of this breakdownSweden: 353 citing papers, 2.5% of this breakdownDenmark: 264 citing papers, 1.9% of this breakdownJapan: 242 citing papers, 1.7% of this breakdown
0%24.8%Other 27.6%

Institutions

Fields

  • Biochemistry, Genetics and Molecular Biology61.9%
  • Agricultural and Biological Sciences14.5%
  • Medicine6.1%
  • Environmental Science4.3%
  • Immunology and Microbiology3.8%
  • Neuroscience2%
  • Other7.4%

Topics

  • Genomics and Phylogenetic Studies10.1%
  • Genetic diversity and population structure9.4%
  • Chromosomal and Genetic Variations5.1%
  • Evolution and Genetic Dynamics3.7%
  • Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities2.3%
  • Genetic Mapping and Diversity in Plants and Animals2%
  • Other67.4%

Coauthors

All papers

Open in search
  1. CAFE 5 models variation in evolutionary rates among gene families

    Authors: Fábio K. Mendes, Dan Vanderpool, Ben Fulton, Matthew W. Hahn - Bioinformatics, Bioinform. 2009 cited by 835

  2. CAFE: a computational tool for the study of gene family evolution

    Authors: Tijl De Bie, Nello Cristianini, Jeffery P. Demuth, Matthew W. Hahn - Bioinformatics, Bioinform. 2006 cited by 2,062

  3. Estimating Gene Gain and Loss Rates in the Presence of Error in Genome Assembly and Annotation Using CAFE 3

    Authors: Mira Han, Gregg W.C. Thomas, Jose Lugo-Martinez, Matthew W. Hahn - Molecular Biology and Evolution 2013 cited by 904

  4. Sex Determination: Why So Many Ways of Doing It?

    Authors: Doris Bachtrog, Judith E. Mank, Catherine L. Peichel, Mark Kirkpatrick, Sarah P. Otto, Tia‐Lynn Ashman, Matthew W. Hahn, Jun Kitano, Itay Mayrose, Ray Ming, Nicolas Perrin, Laura Ross, Nicole Valenzuela, Jana C. Vamosi - PLoS Biology 2014 cited by 1,296

  5. Reanalysis suggests that genomic islands of speciation are due to reduced diversity, not reduced gene flow

    Authors: Tami Cruickshank, Matthew W. Hahn - Molecular Ecology 2014 cited by 1,160

  6. Extensive introgression in a malaria vector species complex revealed by phylogenomics

    Authors: Michaël C. Fontaine, James B. Pease, Aaron Steele, Robert M. Waterhouse, Daniel E. Neafsey, Igor V. Sharakhov, Xiaofang Jiang, A. Brantley Hall, Flaminia Catteruccia, Evdoxia G. Kakani, Sara N. Mitchell, Yi-Chieh Wu, Hilary A. Smith, R. Rebecca Love, Mara Lawniczak, Michel A Slotman, Scott Emrich, Matthew W. Hahn, Nora J. Besansky - Science 2014 cited by 738

  7. Phylogenomic approaches to detecting and characterizing introgression

    Authors: Mark S. Hibbins, Matthew W. Hahn - Genetics 2021 cited by 228

  8. Phase 3 Efficacy Trial of Modified Vaccinia Ankara as a Vaccine against Smallpox

    Authors: Phillip R. Pittman, Matthew W. Hahn, HeeChoon S. Lee, Craig Koca, Nathaly Samy, Darja Schmidt, Joachim Hornung, Heinz Weidenthaler, Christopher R. Heery, Thomas P.H. Meyer, Günter Silbernagl, Jane Maclennan, Paul Chaplin - New England Journal of Medicine 2019 cited by 256

  9. How reticulated are species?

    Authors: James Mallet, Nora J. Besansky, Matthew W. Hahn - BioEssays 2015 cited by 647

  10. Evolutionary and Biomedical Insights from the Rhesus Macaque Genome

    Authors: Richard A. Gibbs, Jeffrey Rogers, Michael G. Katze, Roger E. Bumgarner, George M. Weinstock, Elaine R. Mardis, Karin Remington, Robert L. Strausberg, J. Craig Venter, Richard K. Wilson, Mark A. Batzer, Carlos D. Bustamante, Evan E. Eichler, Matthew W. Hahn, Ross C. Hardison, Kateryna D. Makova, Webb Miller, Aleksandar Milosavljevic, Robert E. Palermo, Adam Siepel, James M. Sikela, Tony Attaway, Stephanie Bell, Kelly E. Bernard, Christian Buhay, Mimi N. Chandrabose, Marvin Dao, Clay Davis, Kimberly D. Delehaunty, Yan Ding, Huyen Dinh, Shannon Dugan-Rocha, Lucinda A. Fulton, Ramatu Ayiesha Gabisi, Toni T. Garner, Jennifer Godfrey, Alicia Hawes, Judith Hernandez, Sandra Hines, Michael Holder, Jennifer Hume, Shalini N. Jhangiani, Vandita Joshi, Ziad Khan, Ewen F. Kirkness, Andrew Cree, R. Gerald Fowler, Sandra Lee, Lora Lewis, Zhangwan Li, Yih-shin Liu, Stephanie Moore, Donna M. Muzny, Lynne V. Nazareth, Dinh Ngoc Ngo, Geoffrey Okwuonu, Grace Pai, David L. Parker, Heidie A. Paul, Cynthia Pfannkoch, Craig Pohl, Yu-Hui Rogers, San Juana Ruiz, Aniko Sabo, Jireh Santibanez, Brian Schneider, Scott M. Smith, Erica Sodergren, Amanda F. Svatek, Teresa R. Utterback, Selina Vattathil, Wesley C. Warren, Courtney White, Asif Chinwalla, Yucheng Feng, Aaron L. Halpern, LaDeana W. Hillier, Xiaoqiu Huang, Pat Minx, Joanne O. Nelson, Kymberlie Pepin, Xiang Qin, Granger G. Sutton, Eli Venter, Brian P. Walenz, John W. Wallis, Kim C. Worley, Shiaw‐Pyng Yang, Steven M. Jones, Marco A. Marra, Mariano Rocchi, Jacqueline E. Schein, Robert Baertsch, Laura Clarke, Miklós Csürös, Jarret Glasscock, R. Alan Harris, Paul Havlak, Andrew Jackson, Huaiyang Jiang and 76 more - Science 2007 cited by 1,451

  11. Convergent evolution of the genomes of marine mammals

    Authors: Andrew D. Foote, Yue Liu, Gregg W.C. Thomas, Tomáš Vinař, Jessica Alföldi, Jixin Deng, Shannon Dugan, Cornelis E. van Elk, Margaret E. Hunter, Vandita Joshi, Ziad Khan, Christie Kovar, Sandra L. Lee, Kerstin Lindblad‐Toh, Annalaura Mancia, Rasmus Nielsen, Xiang Qin, Jiaxin Qu, Brian J. Raney, Nagarjun Vijay, Jochen B. W. Wolf, Matthew W. Hahn, Donna M. Muzny, Kim C. Worley, M. Thomas P. Gilbert, Richard A. Gibbs - Nature Genetics 2015 cited by 498

  12. Detection and Polarization of Introgression in a Five-Taxon Phylogeny

    Authors: James B. Pease, Matthew W. Hahn - Systematic Biology 2015 cited by 312

  13. Phylogenomics Reveals Three Sources of Adaptive Variation during a Rapid Radiation

    Authors: James B. Pease, David C. Haak, Matthew W. Hahn, Leonie C. Moyle - PLoS Biology 2016 cited by 486

  14. Gene content evolution in the arthropods

    Authors: Gregg W.C. Thomas, Elias Dohmen, Daniel Hughes, Shwetha C. Murali, Monica F. Poelchau, Karl M. Glastad, Clare A. Anstead, Nadia A. Ayoub, Philip Batterham, Michelle Bellair, Greta J. Binford, Hsu Chao, Yolanda H. Chen, Christopher Childers, Huyen Dinh, HarshaVardhan Doddapaneni, Jian J. Duan, Shannon Dugan, Lauren A. Esposito, Markus Friedrich, Jessica E. Garb, Robin B. Gasser, Michael A. D. Goodisman, Dawn E. Gundersen‐Rindal, Yi Han, Alfred M. Handler, Masatsugu Hatakeyama, Lars Hering, Wayne B. Hunter, Panagiotis Ioannidis, Joy C. Jayaseelan, Divya Kalra, Abderrahman Khila, Pasi K. Korhonen, Carol Eunmi Lee, Sandra L. Lee, Yiyuan Li, Amelia R. I. Lindsey, Georg Mayer, Alistair P. McGregor, Duane D. McKenna, Bernhard Misof, Mala Munidasa, Mónica Muñoz-Torres, Donna M. Muzny, Oliver Niehuis, Nkechinyere Osuji-Lacy, Subba Reddy Palli, Kristen A. Panfilio, Matthias Pechmann, Trent Perry, Ralph S. Peters, Helen C. Poynton, Nikola‐Michael Prpic, Jiaxin Qu, Dorith Rotenberg, Coby Schal, Sean D. Schoville, Erin D. Scully, Evette Skinner, Daniel B. Sloan, Richard Stouthamer, Michael R. Strand, Nikolaus U. Szucsich, Asela Wijeratne, Neil D. Young, Eduardo E. Zattara, Joshua B. Benoit, Evgeny M. Zdobnov, Michael E. Pfrender, Kevin J. Hackett, John H. Werren, Kim C. Worley, Richard A. Gibbs, Ariel D. Chipman, Robert M. Waterhouse, Erich Bornberg‐Bauer, Matthew W. Hahn, Stephen Richards - Genome biology 2020 cited by 257

  15. Estimating the tempo and mode of gene family evolution from comparative genomic data

    Authors: Matthew W. Hahn, Tijl De Bie, Jason Stajich, Chi-Ngon Nguyen, Nello Cristianini - Genome Research 2005 cited by 358

  16. Primate phylogenomics uncovers multiple rapid radiations and ancient interspecific introgression

    Authors: Dan Vanderpool, Bùi Quang Minh, Robert Lanfear, Daniel Hughes, Shwetha C. Murali, R. Alan Harris, Muthuswamy Raveendran, Donna M. Muzny, Mark S. Hibbins, R. Williamson, Richard A. Gibbs, Kim C. Worley, Jeffrey Rogers, Matthew W. Hahn - PLoS Biology 2020 cited by 120

  17. Gene Tree Discordance Causes Apparent Substitution Rate Variation

    Authors: Fábio K. Mendes, Matthew W. Hahn - Systematic Biology 2016 cited by 238

  18. Genome variation and population structure among 1142 mosquitoes of the African malaria vector species Anopheles gambiae and Anopheles coluzzii

    Authors: The Anopheles gambiae 1000 Genomes Consortium, Chris C.S. Clarkson, Alistair Miles, Nicholas J. Harding, Eric R. Lucas, C.J. Battey, Jorge Edouardo Amaya-Romero, Andrew D. Kern, Michaël C. Fontaine, Martin J. Donnelly, Mara K.N. Lawniczak, Dominic P. Kwiatkowski, Martin J. Donnelly, Diégo Ayala, Nora J. Besansky, Austin Burt, Beniamino Caputo, Alessandra della Torre, Michaël C. Fontaine, H. Charles J. Godfray, Matthew W. Hahn, Andrew D. Kern, Dominic P. Kwiatkowski, Mara K.N. Lawniczak, Janet Midega, Samantha O'Loughlin, João Pinto, Michelle M. Riehle, Igor V. Sharakhov, Daniel R. Schrider, Kenneth D. Vernick, David Weetman, Craig S. Wilding, Bradley J. White, Angola: Arlete D. Troco, João Pinto, Bioko: Jorge Cano, Burkina Faso: Abdoulaye Diabaté, Samantha O'Loughlin, Austin Burt, Cameroon: Carlo Costantini, Kyanne R Rohatgi, Nora J. Besansky, Côte d'Ivoire: Edi Constant, David Weetman, Gabon: Nohal Elissa, João Pinto, Gambia: Davis C. Nwakanma, Musa Jawara, Ghana: John Essandoh, David Weetman, Guinea: Boubacar Coulibaly, Michelle M. Riehle, Kenneth D. Vernick, Guinea-Bissau: João Pinto, João Dinis, Kenya: Janet Midega, Charles Mbogo, Philip Bejon, Mayotte: Gilbert Le Goff, Vincent Robert, Uganda: Craig S. Wilding, David Weetman, Henry Mawejje, Martin J. Donnelly, Laboratory crosses: David Weetman, Craig S. Wilding, Martin J. Donnelly, Jim Stalker, Kirk A. Rockett, Eleanor Drury, Daniel G. Mead, Anna E. Jeffreys, Christina Hubbart, Kate Rowlands, Alison T. Isaacs, Dushyanth Jyothi, Claudio Malangone, Maryam Kamali, Victoria Simpson, Christa Henrichs, Dominic P. Kwiatkowski - Genome Research 2020 cited by 173

  19. Comparative Genomics of Centrality and Essentiality in Three Eukaryotic Protein-Interaction Networks

    Authors: Matthew W. Hahn, Andrew D. Kern - Molecular Biology and Evolution 2004 cited by 683

  20. The Neutral Theory in Light of Natural Selection

    Authors: Andrew D. Kern, Matthew W. Hahn - Molecular Biology and Evolution 2018 cited by 283

  21. Gene-Tree Reconciliation with MUL-Trees to Resolve Polyploidy Events

    Authors: Gregg W.C. Thomas, Syed Hussain Ather, Matthew W. Hahn - Systematic Biology 2017 cited by 139

  22. Gibbon genome and the fast karyotype evolution of small apes

    Authors: Lucia Carbone, R. Alan Harris, Sante Gnerre, Krishna R. Veeramah, Belén Lorente-Galdós, John Huddleston, Thomas J. Meyer, Javier Herrero, Christian Roos, Bronwen Aken, Fabio Anaclerio, Nicoletta Archidiacono, Carl Baker, Daniel Barrell, Mark A. Batzer, Kathryn Beal, Antoine Blancher, Craig L. Bohrson, Markus Brameier, Michael S. Campbell, Oronzo Capozzi, Claudio Casola, Giorgia Chiatante, Andrew Cree, Annette Damert, Pieter J. de Jong, Laura Dumas, Marcos Fernández-Callejo, Paul Flicek, Nina V. Fuchs, Marta Gut, Marta Gut, Matthew W. Hahn, Jessica Hernández-Rodríguez, LaDeana W. Hillier, Robert Hubley, Bianca Ianc, Zsuzsanna Izsvák, Nina G. Jablonski, Laurel Johnstone, Anis Karimpour‐Fard, Miriam K. Konkel, Dennis Kostka, Nathan H. Lazar, Sandra L. Lee, Lora Lewis, Yue Liu, Devin P. Locke, Swapan Mallick, Fernando L. Méndez, Matthieu Muffato, Lynne V. Nazareth, Kimberly A. Nevonen, Majesta O’Bleness, Cornelia Ochis, Duncan T. Odom, Katherine S. Pollard, Javier Quilez, David Reich, Mariano Rocchi, Gerald G. Schumann, Stephen M. J. Searle, James M. Sikela, Gabriella Skollár, Arian F. A. Smit, Kemal Sönmez, Boudewijn ten Hallers, Elizabeth Terhune, Gregg W.C. Thomas, Brygg Ullmer, Mario Ventura, Jerilyn A. Walker, Jeffrey D. Wall, Lutz Walter, Michelle C. Ward, Sarah J. Wheelan, Christopher W. Whelan, Simon White, Larry Wilhelm, August E. Woerner, Mark Yandell, Baoli Zhu, Michael F. Hammer, Tomàs Marquès‐Bonet, Evan E. Eichler, Lucinda A. Fulton, Catrina C. Fronick, Donna M. Muzny, Wesley C. Warren, Kim C. Worley, Jeffrey Rogers, Richard K. Wilson, Richard A. Gibbs - Nature 2014 cited by 393

  23. Genus-Wide Characterization of Bumblebee Genomes Provides Insights into Their Evolution and Variation in Ecological and Behavioral Traits

    Authors: Cheng Sun, Jiaxing Huang, Yun Wang, Xiaomeng Zhao, Long Su, Gregg W.C. Thomas, Mengya Zhao, Xingtan Zhang, Irwin Jungreis, Manolis Kellis, Saverio Vicario, Igor V. Sharakhov, Semen M. Bondarenko, Martin Hasselmann, Chang N. Kim, Benedict Paten, Luca Penso-Dolfin, Lı Wang, Yuxiao Chang, Qiang Gao, Ling Ma, Lina Ma, Zhang Zhang, Hongbo Zhang, Hua‐Hao Zhang, Livio Ruzzante, Hugh M. Robertson, Yihui Zhu, Yanjie Liu, Huipeng Yang, Lele Ding, Quangui Wang, Dongna Ma, Weilin Xu, Liang Cheng, Michael W. Itgen, Lauren Mee, Gang Cao, Ze Zhang, Ben M. Sadd, Matthew W. Hahn, Sarah Schaack, Seth M. Barribeau, Paul H. Williams, Robert M. Waterhouse, Rachel Lockridge Mueller - Molecular Biology and Evolution 2020 cited by 119

  24. The Mutationathon highlights the importance of reaching standardization in estimates of pedigree-based germline mutation rates

    Authors: Lucie A. Bergeron, Søren Besenbacher, Tychele N. Turner, Cyril J. Versoza, Richard J. Wang, Alivia Lee Price, Ellie E. Armstrong, Meritxell Riera, Jedidiah Carlson, Hwei‐yen Chen, Matthew W. Hahn, Kelley Harris, April Snøfrid Kleppe, Elora H. López-Nandam, Priya Moorjani, Susanne P. Pfeifer, George P. Tiley, Anne D. Yoder, Guojie Zhang, Mikkel Heide Schierup - eLife 2022 cited by 85