Peter K. Sorger
Active 1959–2026
- 287
- Papers
- 53,809
- Citations
- 122
- h-index
- 260
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology53.2%
- Medicine25.7%
- Computer Science5.5%
- Immunology and Microbiology5.3%
- Engineering3%
- Agricultural and Biological Sciences1.3%
- Other6%
Topics
- Single-cell and spatial transcriptomics4.5%
- Microtubule and mitosis dynamics2.9%
- Cancer Immunotherapy and Biomarkers2.7%
- Bioinformatics and Genomic Networks2.7%
- Gene Regulatory Network Analysis2.7%
- Computational Drug Discovery Methods2.5%
- Other82%
Coauthors
- Sandro Santagata46
- Jia‐Ren Lin41
- Douglas A. Lauffenburger23
- Mario Niepel23
- Clarence Yapp22
- Jeremy L. Muhlich19
- Yu-An Chen19
- Zoltan Maliga19
- Caitlin E. Mills18
- Hanspeter Pfister17
- Marc Hafner16
- Nathanael S. Gray14
- Ajit J. Nirmal12
- Connor A. Jacobson12
- Shannon Coy12
- Julio Sáez-Rodríguez11
- Kartik Subramanian11
- Sarah A. Boswell11
- Benjamin Izar10
- Deborah Plana10
- Denis Schapiro10
- Gregory J. Baker10
- John A. Bachman10
- John G. Albeck10
All papers
- Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq
Authors: Itay Tirosh, Benjamin Izar, Sanjay M. Prakadan, Marc H. Wadsworth, Daniel J. Treacy, John J. Trombetta, Asaf Rotem, Christopher Rodman, Christine G. Lian, Gëorge F. Murphy, Mohammad Fallahi‐Sichani, Ken Dutton‐Regester, Jia‐Ren Lin, Ofir Cohen, Parin Shah, Diana Lu, Alex S. Genshaft, Travis K. Hughes, Carly G.K. Ziegler, Samuel W. Kazer, Aleth Gaillard, Kellie E. Kolb, Alexandra–Chloé Villani, Cory M. Johannessen, Aleksandr Andreev, Eliezer M. Van Allen, Monica M. Bertagnolli, Peter K. Sorger, Ryan J. Sullivan, Keith T. Flaherty, Dennie T. Frederick, Judit Jané‐Valbuena, Charles H. Yoon, Orit Rozenblatt–Rosen, Alex K. Shalek, Aviv Regev, Levi A. Garraway - Science 2016 cited by 5,391
- A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade
Authors: Livnat Jerby‐Arnon, Parin Shah, Michael S. Cuoco, Christopher Rodman, Mei-Ju Su, Johannes C. Melms, Rachel Leeson, Abhay Kanodia, Shaolin Mei, Jia‐Ren Lin, Shu Wang, Bokang Rabasha, David Liu, Gao Zhang, Claire Margolais, Orr Ashenberg, Patrick A. Ott, Elizabeth I. Buchbinder, Rizwan Haq, F. Stephen Hodi, Genevieve M. Boland, Ryan J. Sullivan, Dennie T. Frederick, Benchun Miao, Tabea Moll, Keith T. Flaherty, Meenhard Herlyn, Russell W. Jenkins, Rohit Thummalapalli, Monika S. Kowalczyk, Israel Cañadas, Bastian Schilling, Adam N.R. Cartwright, Adrienne Luoma, Shruti Malu, Patrick Hwu, Chantale Bernatchez, Marie-Andrée Forget, David A. Barbie, Alex K. Shalek, Itay Tirosh, Peter K. Sorger, Kai W. Wucherpfennig, Eliezer M. Van Allen, Dirk Schadendorf, Bruce E. Johnson, Asaf Rotem, Orit Rozenblatt–Rosen, Levi A. Garraway, Charles H. Yoon, Benjamin Izar, Aviv Regev - Cell 2018 cited by 1,482
- Obesity Shapes Metabolism in the Tumor Microenvironment to Suppress Anti-Tumor Immunity
Authors: Alison E. Ringel, Jefte M. Drijvers, Gregory J. Baker, Alessia Catozzi, Juan Carlos García‐Cañaveras, Brandon M. Gassaway, Brian C. Miller, Vikram R. Juneja, Thao H. Nguyen, Shakchhi Joshi, Cong-Hui Yao, Haejin Yoon, Peter T. Sage, Martin W. LaFleur, Justin D. Trombley, Connor A. Jacobson, Zoltan Maliga, Steven P. Gygi, Peter K. Sorger, Joshua D. Rabinowitz, Arlene H. Sharpe, Marcia C. Haigis - Cell 2020 cited by 791
- Single-sequence protein structure prediction using a language model and deep learning
Authors: Ratul Chowdhury, Nazim Bouatta, Surojit Biswas, Christina Floristean, Anant Kharkar, Koushik Roy, Charlotte Rochereau, Gustaf Ahdritz, Joanna Zhang, George M. Church, Peter K. Sorger, Mohammed AlQuraishi - Nature Biotechnology 2022 cited by 425
- OpenFold: retraining AlphaFold2 yields new insights into its learning mechanisms and capacity for generalization
Authors: Gustaf Ahdritz, Nazim Bouatta, Christina Floristean, Sachin Kadyan, Qinghui Xia, William Gerecke, Timothy J. O’Donnell, Daniel Berenberg, I. Fisk, Niccolò Zanichelli, Bo Zhang, Arkadiusz Nowaczynski, Bei Wang, Marta M. Stepniewska-Dziubinska, Shang Zhang, Adegoke A. Ojewole, Murat Efe Guney, Stella Biderman, Andrew M. Watkins, Stephen Ra, Pablo Ribalta Lorenzo, Lucas G. Nivón, Brian D. Weitzner, Yih‐En Andrew Ban, Shiyang Chen, Minjia Zhang, Conglong Li, Shuaiwen Leon Song, Yuxiong He, Peter K. Sorger, Emad Mostaque, Zhao Zhang, Richard Bonneau, Mohammed AlQuraishi - Nature Methods 2024 cited by 289
- Highly multiplexed immunofluorescence imaging of human tissues and tumors using t-CyCIF and conventional optical microscopes
Authors: Jia‐Ren Lin, Benjamin Izar, Shu Wang, Clarence Yapp, Shaolin Mei, Parin Shah, Sandro Santagata, Peter K. Sorger - eLife 2017 cited by 746
- Oncometabolite d -2HG alters T cell metabolism to impair CD8 + T cell function
Authors: Giulia Notarangelo, Jessica B. Spinelli, Elizabeth M. Perez, Gregory J. Baker, Kiran Kurmi, Ilaria Elia, Sylwia A. Stopka, Gerard Baquer, Jia‐Ren Lin, Alexandra J. Golby, Shakchhi Joshi, Heide F. Baron, Jefte M. Drijvers, Peter Georgiev, Alison E. Ringel, Elma Zaganjor, Samuel K. McBrayer, Peter K. Sorger, Arlene H. Sharpe, Kai W. Wucherpfennig, Sandro Santagata, Nathalie Y.R. Agar, Mario L. Suvà, Marcia C. Haigis - Science 2022 cited by 269
- Multiplexed 3D atlas of state transitions and immune interaction in colorectal cancer
Authors: Jia‐Ren Lin, Shu Wang, Shannon Coy, Yu‐An Chen, Clarence Yapp, Madison Tyler, Maulik K. Nariya, Cody N. Heiser, Ken S. Lau, Sandro Santagata, Peter K. Sorger - Cell 2023 cited by 299
- The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution
Authors: Orit Rozenblatt–Rosen, Aviv Regev, Philipp Oberdoerffer, Tal Nawy, Anna Hupalowska, Jennifer Rood, Orr Ashenberg, Ethan Cerami, Robert J. Coffey, Emek Demir, Li Ding, Edward D. Esplin, James M. Ford, Jeremy Goecks, Sharmistha Ghosh, Joe W. Gray, Justin Guinney, Sean E. Hanlon, Shannon K. Hughes, E. Shelley Hwang, Christine A. Iacobuzio–Donahue, Judit Jané‐Valbuena, Bruce E. Johnson, Ken S. Lau, Tracy Lively, Sarah A. Mazzilli, Dana Pe’er, Sandro Santagata, Alex K. Shalek, Denis Schapiro, M Snyder, Peter K. Sorger, Avrum Spira, Sudhir Srivastava, Kai Tan, Robert B. West, Elizabeth H. Williams, Denise R. Aberle, Samuel I. Achilefu, Foluso O. Ademuyiwa, Andrew Adey, Rebecca Aft, Rachana Agarwal, Ruben A. Aguilar, Fatemeh Alikarami, Viola Allaj, Christopher I. Amos, Robert A. Anders, Michael Angelo, Kristen Anton, Orr Ashenberg, Jon C. Aster, Özgün Babur, Amir Bahmani, Akshay Balsubramani, David Barrett, Jennifer Beane, Diane E. Bender, Kathrin M. Bernt, Lynne D. Berry, Courtney B. Betts, Julie Bletz, Katie E. Blise, Adrienne Boire, Genevieve M. Boland, Alexander Borowsky, Kristopher R. Bosse, Matthew J. Bott, Ed Boyden, James D. Brooks, Raphael Bueno, Erik A. Burlingame, Qiuyin Cai, Joshua D. Campbell, Wagma Caravan, Ethan Cerami, Hassan Chaı̈b, Joseph M. Chan, Young Hwan Chang, Deyali Chatterjee, Ojasvi Chaudhary, Alyce A. Chen, Bob Chen, Changya Chen, Chia‐Hui Chen, Feng Chen, Yuan Chen, Milan G. Chheda, Koei Chin, Roxanne Chiu, Shih‐Kai Chu, Rodrigo Chuaqui, Jaeyoung Chun, Luis Cisneros, Robert J. Coffey, Graham A. Colditz, Kristina A. Cole, Natalie B. Collins, Kévin Contrepois, Lisa M. Coussens and 294 more - Cell 2020 cited by 615
- A single-cell landscape of high-grade serous ovarian cancer
Authors: Benjamin Izar, Itay Tirosh, Elizabeth H. Stover, Isaac Wakiro, Michael S. Cuoco, Idan Alter, Christopher Rodman, Rachel Leeson, Mei-Ju Su, Parin Shah, Marcin Iwanicki, Sarah R. Walker, Abhay Kanodia, Johannes C. Melms, Shaolin Mei, Jia‐Ren Lin, Caroline Porter, Michal Slyper, Julia Waldman, Livnat Jerby‐Arnon, Orr Ashenberg, Titus J. Brinker, Caitlin E. Mills, Meri Rogava, Sébastien Vigneau, Peter K. Sorger, Levi A. Garraway, Panagiotis A. Konstantinopoulos, Joyce F. Liu, Ursula A. Matulonis, Bruce E. Johnson, Orit Rozenblatt–Rosen, Asaf Rotem, Aviv Regev - Nature Medicine 2020 cited by 522
- Combination Cancer Therapy Can Confer Benefit via Patient-to-Patient Variability without Drug Additivity or Synergy
Authors: Adam C. Palmer, Peter K. Sorger - Cell 2017 cited by 676
- Independent Drug Action in Combination Therapy: Implications for Precision Oncology
Authors: Deborah Plana, Adam C. Palmer, Peter K. Sorger - Cancer Discovery 2022 cited by 301
- Machine learning identifies candidates for drug repurposing in Alzheimer’s disease
Authors: Steve Rodriguez, Clemens B. Hug, Petar V. Todorov, Nienke Moret, Sarah A. Boswell, Kyle E. Evans, George Zhou, Nathan Johnson, Bradley T. Hyman, Peter K. Sorger, Mark W. Albers, Artem Sokolov - Nature Communications 2021 cited by 297
- Highly multiplexed imaging of single cells using a high-throughput cyclic immunofluorescence method
Authors: Jia‐Ren Lin, Mohammad Fallahi‐Sichani, Peter K. Sorger - Nature Communications 2015 cited by 608
- MCMICRO: a scalable, modular image-processing pipeline for multiplexed tissue imaging
Authors: Denis Schapiro, Artem Sokolov, Clarence Yapp, Yu‐An Chen, Jeremy L. Muhlich, Joshua M. Hess, Allison Creason, Ajit J. Nirmal, Gregory J. Baker, Maulik K. Nariya, Jia‐Ren Lin, Zoltan Maliga, Connor A. Jacobson, Matthew Hodgman, Juha Ruokonen, Samouil L. Farhi, Domenic Abbondanza, Eliot T. McKinley, Daniel Persson, Courtney B. Betts, Shamilene Sivagnanam, Aviv Regev, Jeremy Goecks, Robert J. Coffey, Lisa M. Coussens, Sandro Santagata, Peter K. Sorger - Nature Methods 2021 cited by 244
- High-plex immunofluorescence imaging and traditional histology of the same tissue section for discovering image-based biomarkers
Authors: Jia‐Ren Lin, Yu-An Chen, Daniel Campton, Jeremy Cooper, Shannon Coy, Clarence Yapp, Juliann B. Tefft, Erin McCarty, Keith L. Ligon, Scott J. Rodig, Steven Reese, Tad George, Sandro Santagata, Peter K. Sorger - Nature Cancer 2023 cited by 150
- Growth rate inhibition metrics correct for confounders in measuring sensitivity to cancer drugs
Authors: Marc Hafner, Mario Niepel, Mirra Chung, Peter K. Sorger - Nature Methods 2016 cited by 741
- Myeloid antigen-presenting cell niches sustain antitumor T cells and license PD-1 blockade via CD28 costimulation
Authors: Jaikumar Duraiswamy, Riccardo Turrini, Aspram Minasyan, David Barras, Isaac Crespo, Alizée J Grimm, Julia Casado, Raphaël Genolet, Fabrizio Benedetti, Alexandre Wicky, Kalliopi Ioannidou, Wilson Castro, Christopher L. Neal, Amandine Moriot, Stéphanie Renaud-Tissot, Victor Anstett, Noémie Fahr, János L. Tanyi, Monika A. Eiva, Connor A. Jacobson, Kathleen T. Montone, Marie Christine Wulff Westergaard, Inge Marie Svane, Lana E. Kandalaft, Mauro Delorenzi, Peter K. Sorger, Anniina Färkkilä, Olivier Michielin, Vincent Zoete, Santiago J. Carmona, Periklis Foukas, Daniel J. Powell, Sylvie Rusakiewicz, Marie‐Agnès Doucey, Denarda Dangaj Laniti, George Coukos - Cancer Cell 2021 cited by 194
- Targeting TBK1 to overcome resistance to cancer immunotherapy
Authors: Yi Sun, Or‐Yam Revach, Seth Anderson, Emily Kessler, Clara Wolfe, Anne Jenney, Caitlin E. Mills, Emily Robitschek, Thomas Davis, Sarah Kim, Amina Fu, Xiang Ma, Jia Gwee, Payal Tiwari, Peter P. Du, Princy Sindurakar, Jun Tian, Arnav Mehta, Alexis M. Schneider, Keren Yizhak, Moshe Sade-Feldman, Thomas J. LaSalle, Tatyana Sharova, Hongyan Xie, Shuming Liu, William A. Michaud, Rodrigo Saad-Beretta, Kathleen B. Yates, Arvin Iracheta‐Vellve, Johan Spetz, Xingping Qin, Kristopher A. Sarosiek, Gao Zhang, Jong Wook Kim, Mack Y. Su, Angelina M. Cicerchia, Martin Q. Rasmussen, Samuel J. Klempner, Dejan Juric, Sara I. Pai, David M. Miller, Anita Giobbie‐Hurder, Jonathan Chen, Karin Pelka, Dennie T. Frederick, Susanna Stinson, Elena V. Ivanova, Amir Reza Aref, Cloud P. Paweletz, David A. Barbie, Debattama R. Sen, David E. Fisher, Ryan B. Corcoran, Nir Hacohen, Peter K. Sorger, Keith T. Flaherty, Genevieve M. Boland, Robert T. Manguso, Russell W. Jenkins - Nature 2023 cited by 167
- Targeting immunosuppressive macrophages overcomes PARP inhibitor resistance in BRCA1-associated triple-negative breast cancer
Authors: Anita K. Mehta, Emily Cheney, Christina Hartl, Constantia Pantelidou, Madisson Oliwa, Jessica A. Castrillon, Jia‐Ren Lin, Katie E. Hurst, Mateus de Oliveira Taveira, Nathan Johnson, William M. Oldham, Marian Kalocsay, Matthew J. Berberich, Sarah A. Boswell, Aditi Kothari, Shawn F. Johnson, Deborah Dillon, Mikel Lipschitz, Scott J. Rodig, Sandro Santagata, Judy E. Garber, Nadine Tung, José Yélamos, Jessica E. Thaxton, Elizabeth A. Mittendorf, Peter K. Sorger, Geoffrey I. Shapiro, Jennifer L. Guerriero - Nature Cancer 2020 cited by 259
- OpenFold: Retraining AlphaFold2 yields new insights into its learning mechanisms and capacity for generalization
Authors: Gustaf Ahdritz, Nazim Bouatta, Christina Floristean, Sachin Kadyan, Qinghui Xia, William Gerecke, Timothy J. O’Donnell, Daniel Berenberg, I. Fisk, Niccolò Zanichelli, Bo Zhang, Arkadiusz Nowaczynski, Bei Wang, Marta M. Stepniewska-Dziubinska, Shang Zhang, Adegoke A. Ojewole, Murat Efe Guney, Stella Biderman, Andrew M. Watkins, Stephen Ra, Pablo Ribalta Lorenzo, Lucas G. Nivón, Brian D. Weitzner, Yih‐En Andrew Ban, Peter K. Sorger, Emad Mostaque, Zhao Zhang, Richard Bonneau, Mohammed AlQuraishi - 2022 cited by 169
- Drug independence and the curability of cancer by combination chemotherapy
Authors: Amy E. Pomeroy, Emmett V. Schmidt, Peter K. Sorger, Adam C. Palmer - Trends in cancer 2022 cited by 165
- Genomic and Immunophenotypic Landscape of Acquired Resistance to PD-(L)1 Blockade in Non–Small-Cell Lung Cancer
Authors: Biagio Ricciuti, Giuseppe Lamberti, Sreekar Reddy Puchala, Navin R. Mahadevan, Jia‐Ren Lin, Joao V. Alessi, Alexander Chowdhury, Yvonne Y. Li, Xinan Wang, Liam F. Spurr, Federica Pecci, Alessandro Di Federico, Deepti Venkatraman, Adriana Barrichello, Malini Gandhi, Victor R. Vaz, Andy Pangilinan, Danielle Haradon, Elinton Lee, Hersh Gupta, Kathleen L. Pfaff, Emma L. Welsh, Mizuki Nishino, Andrew D. Cherniack, Bruce E. Johnson, Jason L. Weirather, Ian Dryg, Scott J. Rodig, Lynette M. Sholl, Peter K. Sorger, Sandro Santagata, Renato Umeton, Mark M. Awad - Journal of Clinical Oncology 2024 cited by 123
- The Library of Integrated Network-Based Cellular Signatures NIH Program: System-Level Cataloging of Human Cells Response to Perturbations
Authors: Alexandra Keenan, Sherry L. Jenkins, Kathleen M. Jagodnik, Simon Koplev, Edward He, Denis Torre, Zichen Wang, Anders B. Dohlman, Moshe C. Silverstein, Alexander Lachmann, Maxim V. Kuleshov, Avi Ma’ayan, Vasileios Stathias, Raymond Terryn, Daniel J. Cooper, Michele Forlin, Amar Koleti, D. Vidović, Caty Chung, Stephan C. Schürer, Jouzas Vasiliauskas, Marcin Pilarczyk, Behrouz Shamsaei, Mehdi Fazel, Yan Ren, Wen Niu, Nicholas A. Clark, Shana White, Naim Al Mahi, Lixia Zhang, Michal Kouril, John F. Reichard, Siva Sivaganesan, Mario Medvedovic, Jarek Meller, Rick J. Koch, Marc R. Birtwistle, Ravi Iyengar, Eric A. Sobie, Evren U. Azeloglu, Julia Kaye, Jeannette M. Osterloh, Kelly Haston, Jaslin Kalra, Steve Finkbiener, Jonathan Li, Pamela Milani, Miriam Adam, Renan Escalante-Chong, Karen Sachs, Alex Lenail, Divya Ramamoorthy, Ernest Fraenkel, Gavin Daigle, Uzma Hussain, Alyssa Coye, Jeffrey Rothstein, Dhruv Sareen, Loren Ornelas, Maria G. Bañuelos, Berhan Mandefro, Ritchie Ho, Clive N. Svendsen, Ryan G. Lim, Jennifer Stocksdale, Malcolm Casale, Terri G. Thompson, Jie Wu, Leslie M. Thompson, Victoria Dardov, Vidya Venkatraman, Andrea Matlock, Jennifer E. Van Eyk, Jacob D. Jaffe, Malvina Papanastasiou, Aravind Subramanian, Todd R. Golub, Sean D. Erickson, Mohammad Fallahi‐Sichani, Marc Hafner, Nathanael S. Gray, Jia‐Ren Lin, Caitlin E. Mills, Jeremy L. Muhlich, Mario Niepel, Caroline E. Shamu, Elizabeth H. Williams, David M. Wrobel, Peter K. Sorger, Laura M. Heiser, Joe W. Gray, James E. Korkola, Gordon B. Mills, Mark A. LaBarge, Heidi S. Feiler, Mark Dane, Elmar Bucher, Michel Nederlof, Damir Sudar, Sean M. Gross and 7 more - Cell Systems 2017 cited by 449
