Fritz J. Sedlazeck
2012–2025 年に発表
- 144
- 論文数
- 28,479
- 被引用数
- 63
- h 指数
- 128
- i10 指数
被引用数
引用元
国・地域
機関
分野
- Biochemistry, Genetics and Molecular Biology62.8%
- Agricultural and Biological Sciences14.9%
- Medicine11.5%
- Environmental Science2.4%
- Immunology and Microbiology2.1%
- Neuroscience1.7%
- その他4.6%
トピック
- Genomics and Phylogenetic Studies12.2%
- Chromosomal and Genetic Variations5.8%
- Genomics and Rare Diseases3.5%
- CRISPR and Genetic Engineering2.5%
- RNA and protein synthesis mechanisms2.5%
- Cancer Genomics and Diagnostics2.4%
- その他71.1%
共著者
- Medhat Mahmoud32
- Michael C. Schatz21
- Nathan D. Olson20
- Justin M. Zook18
- Richard A. Gibbs16
- Donna M. Muzny15
- Justin Wagner15
- Andrew Carroll14
- Chen-Shan Chin14
- Luis F. Paulin14
- Adam C. English13
- Ginger Metcalf12
- Kishwar Shafin12
- Sairam Behera11
- Sergey Koren11
- HarshaVardhan Doddapaneni10
- Jennifer McDaniel10
- Sergey Aganezov10
- Adam M. Phillippy9
- Arkarachai Fungtammasan9
- Arndt von Haeseler9
- Christopher M. Grochowski9
- Michael A. Eberle9
- Shalini N. Jhangiani9
全論文
- The complete sequence of a human genome
著者: Sergey Nurk, Sergey Koren, Arang Rhie, Mikko Rautiainen, Andrey V. Bzikadze, Alla Mikheenko, Mitchell R. Vollger, Nicolas Altemose, Lev Uralsky, Ariel Gershman, Sergey Aganezov, Savannah J. Hoyt, Mark Diekhans, Glennis A. Logsdon, Michael Alonge, Stylianos E. Antonarakis, Matthew Borchers, Gerard G. Bouffard, Shelise Brooks, Gina V. Caldas, Nae-Chyun Chen, Haoyu Cheng, Chen-Shan Chin, William Chow, Leonardo Gomes de Lima, Philip C. Dishuck, Richard Durbin, Tatiana Dvorkina, Ian T. Fiddes, Giulio Formenti, Robert S. Fulton, Arkarachai Fungtammasan, Erik Garrison, Patrick G. S. Grady, Tina A. Graves-Lindsay, Ira M. Hall, Nancy F. Hansen, Gabrielle A. Hartley, Marina Haukness, Kerstin Howe, Michael W. Hunkapiller, Chirag Jain, Miten Jain, Erich D. Jarvis, Peter Kerpedjiev, Melanie Kirsche, Mikhail Kolmogorov, Jonas Korlach, Milinn Kremitzki, Heng Li, Valerie V. Maduro, Tobias Marschall, Ann M. Mc Cartney, Jennifer McDaniel, Danny E. Miller, James C. Mullikin, Eugene W. Myers, Nathan D. Olson, Benedict Paten, Paul Peluso, Pavel A. Pevzner, David Porubskỳ, Tamara Potapova, Е. И. Рогаев, Jeffrey Rosenfeld, Steven L. Salzberg, Valérie Schneider, Fritz J. Sedlazeck, Kishwar Shafin, Colin J. Shew, Alaina Shumate, Ying Sims, Arian F. A. Smit, Daniela C. Soto, Ivan Sović, Jessica M. Storer, Aaron Streets, Beth A. Sullivan, Françoise Thibaud‐Nissen, James Torrance, Justin Wagner, Brian P. Walenz, Aaron M. Wenger, Jonathan Wood, Chunlin Xiao, Stephanie M. Yan, Alice Young, Samantha Zarate, Urvashi Surti, Rajiv C. McCoy, Megan Y. Dennis, Ivan A. Alexandrov, Jennifer L. Gerton, Rachel J. O’Neill, Winston Timp, Justin M. Zook, Michael C. Schatz, Evan E. Eichler, Karen H. Miga, Adam M. Phillippy - Science 2022 被引用: 3,421
- Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome
著者: Aaron M. Wenger, Paul Peluso, William J. Rowell, Pi-Chuan Chang, Richard Hall, Gregory T. Concepcion, Jana Ebler, Arkarachai Fungtammasan, Alexey Kolesnikov, Nathan D. Olson, Armin Töpfer, Michael Alonge, Medhat Mahmoud, Yufeng Qian, Chen-Shan Chin, Adam M. Phillippy, Michael C. Schatz, Gene Myers, Mark A. DePristo, Jue Ruan, Tobias Marschall, Fritz J. Sedlazeck, Justin M. Zook, Heng Li, Sergey Koren, Andrew Carroll, David R. Rank, Michael W. Hunkapiller - Nature Biotechnology 2019 被引用: 1,944
- Phased diploid genome assembly with single-molecule real-time sequencing
著者: Chen-Shan Chin, Paul Peluso, Fritz J. Sedlazeck, Maria Nattestad, Gregory T. Concepcion, Alicia Clum, Christopher Dunn, Ronan C. O’Malley, Rosa Figueroa‐Balderas, Abraham Morales‐Cruz, Grant R. Cramer, Massimo Delledonne, Chongyuan Luo, Joseph R. Ecker, Dario Cantù, David R. Rank, Michael C. Schatz - Nature Methods 2016 被引用: 2,224
- Detection of mosaic and population-level structural variants with Sniffles2
著者: Moritz Smolka, Luis F. Paulin, Christopher M. Grochowski, Dominic W. Horner, Medhat Mahmoud, Sairam Behera, Ester Kalef-Ezra, Mira Gandhi, Karl Hong, Davut Pehli̇van, Sonja W. Scholz, Claudia M.B. Carvalho, Christos Proukakis, Fritz J. Sedlazeck - Nature Biotechnology 2024 被引用: 439
- Transient structural variations have strong effects on quantitative traits and reproductive isolation in fission yeast
著者: Daniel Jeffares, Clemency Jolly, Mimoza Hoti, Doug Speed, Liam P. Shaw, Charalampos Rallis, François Balloux, Christophe Dessimoz, Jürg Bähler, Fritz J. Sedlazeck - Nature Communications 2017 被引用: 944
- Major Impacts of Widespread Structural Variation on Gene Expression and Crop Improvement in Tomato
著者: Michael Alonge, Xingang Wang, Matthias Benoit, Sebastian Soyk, Lara Pereira, Lei Zhang, Hamsini Suresh, Srividya Ramakrishnan, Florian Maumus, Danielle Ciren, Yuval Levy, Tom Harel, Gili Shalev-Schlosser, Ziva Amsellem, Hamid Razifard, Ana L. Caicedo, Denise M. Tieman, Harry J. Klee, Melanie Kirsche, Sergey Aganezov, T. Rhyker Ranallo-Benavidez, Zachary H. Lemmon, Jennifer Kim, Gina M. Robitaille, Melissa Kramer, Sara Goodwin, W. Richard McCombie, Samuel F. Hutton, Joyce Van Eck, Jesse Gillis, Yuval Eshed, Fritz J. Sedlazeck, Esther van der Knaap, Michael C. Schatz, Zachary B. Lippman - Cell 2020 被引用: 911
- Structural variant calling: the long and the short of it
著者: Medhat Mahmoud, Nastassia Gobet, Diana Ivette Cruz-Dávalos, Ninon Mounier, Christophe Dessimoz, Fritz J. Sedlazeck - Genome biology 2019 被引用: 829
- Investigation of product-derived lymphoma following infusion of piggyBac-modified CD19 chimeric antigen receptor T cells
著者: Kenneth Micklethwaite, Kavitha Gowrishankar, Brian Gloss, Ziduo Li, Janine Street, Leili Moezzi, M Mach, Gaurav Sutrave, Leighton Clancy, David Bishop, Raymond H. Y. Louie, Curtis Cai, Jonathan Foox, Matthew MacKay, Fritz J. Sedlazeck, Piers Blombery, Christopher E. Mason, Fabio Luciani, David Gottlieb, Emily Blyth - Blood 2021 被引用: 214
- A robust benchmark for detection of germline large deletions and insertions
著者: Justin M. Zook, Nancy F. Hansen, Nathan D. Olson, Lesley M. Chapman, James C. Mullikin, Chunlin Xiao, Stephen T. Sherry, Sergey Koren, Adam M. Phillippy, Paul C. Boutros, Sayed Mohammad Ebrahim Sahraeian, Vincent Huang, Alexandre Rouette, Noah Alexander, Christopher E. Mason, Iman Hajirasouliha, Camir Ricketts, Joyce Lee, Rick Tearle, Ian T. Fiddes, Álvaro Martínez Barrio, Jeremiah A. Wala, Andrew Carroll, Noushin Ghaffari, Oscar L. Rodriguez, Ali Bashir, Shaun D. Jackman, John J. Farrell, Aaron M. Wenger, Can Alkan, Arda Söylev, Michael C. Schatz, Shilpa Garg, George M. Church, Tobias Marschall, Ken Chen, Xian Fan, Adam C. English, Jeffrey Rosenfeld, Weichen Zhou, Ryan E. Mills, Jay M. Sage, Jennifer R. Davis, Michael D. Kaiser, John S. Oliver, Anthony P. Catalano, Mark Chaisson, Noah Spies, Fritz J. Sedlazeck, Marc Salit - Nature Biotechnology 2020 被引用: 483
- Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes
著者: Kishwar Shafin, Trevor Pesout, Ryan Lorig-Roach, Marina Haukness, Hugh E. Olsen, Colleen M. Bosworth, Joel Armstrong, Kristof Tigyi, Nicholas Maurer, Sergey Koren, Fritz J. Sedlazeck, Tobias Marschall, Simon Mayes, Vânia Costa, Justin M. Zook, Kelvin J. Liu, Duncan Kilburn, Melanie Sorensen, Katherine M. Munson, Mitchell R. Vollger, Jean Monlong, Erik Garrison, Evan E. Eichler, Sofie R. Salama, David Haussler, Richard E. Green, Mark Akeson, Adam M. Phillippy, Karen H. Miga, P. Carnevali, Miten Jain, Benedict Paten - Nature Biotechnology 2020 被引用: 654
- Towards population-scale long-read sequencing
著者: Wouter De Coster, Matthias H. Weissensteiner, Fritz J. Sedlazeck - Nature Reviews Genetics 2021 被引用: 353
- Curated variation benchmarks for challenging medically relevant autosomal genes
著者: Justin Wagner, Nathan D. Olson, Lindsay Harris, Jennifer McDaniel, Haoyu Cheng, Arkarachai Fungtammasan, Yih-Chii Hwang, Richa Gupta, Aaron M. Wenger, William J. Rowell, Ziad Khan, Jesse Farek, Yiming Zhu, Aishwarya Pisupati, Medhat Mahmoud, Chunlin Xiao, Byunggil Yoo, Sayed Mohammad Ebrahim Sahraeian, Danny E. Miller, David Jáspez, José M. Lorenzo-Salazar, Adrián Muñoz‐Barrera, Luis A. Rubio‐Rodríguez, Carlos Flores, Giuseppe Narzisi, Uday S. Evani, Wayne E. Clarke, Joyce Lee, Christopher E. Mason, Stephen E. Lincoln, Karen H. Miga, Mark Ebbert, Alaina Shumate, Heng Li, Chen-Shan Chin, Justin M. Zook, Fritz J. Sedlazeck - Nature Biotechnology 2022 被引用: 252
- Targeted nanopore sequencing with Cas9-guided adapter ligation
著者: Timothy Gilpatrick, Isac Lee, James E. Graham, Etienne Raimondeau, Rebecca Bowen, Andrew Heron, Bradley M. Downs, Saraswati Sukumar, Fritz J. Sedlazeck, Winston Timp - Nature Biotechnology 2020 被引用: 498
- Characterization and visualization of tandem repeats at genome scale
著者: Egor Dolzhenko, Adam C. English, Harriet Dashnow, Guilherme De Sena Brandine, Tom Mokveld, William J. Rowell, Caitlin Karniski, Zev Kronenberg, Matt C. Danzi, Warren Cheung, Chengpeng Bi, Emily Farrow, Aaron M. Wenger, Khi Pin Chua, Verónica Martínez‐Cerdeño, Trevor D. Bartley, Peng Jin, David L. Nelson, Stephan Züchner, Tomi Pastinen, Aaron R. Quinlan, Fritz J. Sedlazeck, Michael A. Eberle - Nature Biotechnology 2024 被引用: 125
- Variant calling and benchmarking in an era of complete human genome sequences
著者: Nathan D. Olson, Justin Wagner, Nathan Dwarshuis, Karen H. Miga, Fritz J. Sedlazeck, Marc Salit, Justin M. Zook - Nature Reviews Genetics 2023 被引用: 164
- RaGOO: fast and accurate reference-guided scaffolding of draft genomes
著者: Michael Alonge, Sebastian Soyk, Srividya Ramakrishnan, Xingang Wang, Sara Goodwin, Fritz J. Sedlazeck, Zachary B. Lippman, Michael C. Schatz - Genome biology 2019 被引用: 764
- Ultrarapid Nanopore Genome Sequencing in a Critical Care Setting
著者: John E. Gorzynski, Sneha D. Goenka, Kishwar Shafin, Tanner Jensen, Dianna G. Fisk, Megan E. Grove, Elizabeth Spiteri, Trevor Pesout, Jean Monlong, Gunjan Baid, Jonathan A. Bernstein, Scott R. Ceresnak, Pi-Chuan Chang, Jeffrey W. Christle, Henry Chubb, Karen Dalton, Kyla Dunn, Daniel R. Garalde, Joseph Guillory, Joshua W. Knowles, Alexey Kolesnikov, Michael Ma, Tia Moscarello, Maria Nattestad, Marco Pérez, Maura Ruzhnikov, Mehrzad Samadi, Ankit Setia, Chris Wright, Courtney J. Wusthoff, Katherine Xiong, Tong Zhu, Miten Jain, Fritz J. Sedlazeck, Andrew Carroll, Benedict Paten, Euan A. Ashley - New England Journal of Medicine 2022 被引用: 219
- PrecisionFDA Truth Challenge V2: Calling variants from short and long reads in difficult-to-map regions
著者: Nathan D. Olson, Justin Wagner, Jennifer McDaniel, Sarah H. Stephens, Samuel T. Westreich, Anish G. Prasanna, Elaine Johanson, Emily S. Boja, Ezekiel J. Maier, Omar Serang, David Jáspez, José M. Lorenzo-Salazar, Adrián Muñoz‐Barrera, Luis A. Rubio‐Rodríguez, Carlos Flores, Konstantinos Kyriakidis, Andigoni Malousi, Kishwar Shafin, Trevor Pesout, Miten Jain, Benedict Paten, Pi-Chuan Chang, Alexey Kolesnikov, Maria Nattestad, Gunjan Baid, Sidharth Goel, Howard H. Yang, Andrew Carroll, Robert Eveleigh, Mathieu Bourgey, Guillaume Bourque, Gen Li, Chouxian Ma, LinQi Tang, Yuanping Du, Shaowei Zhang, Jordi Morata, Raúl Tonda, Genı́s Parra, Jean-Rémi Trotta, Christian Brueffer, Sinem Demirkaya-Budak, Duygu Kabakci-Zorlu, Deniz Turgut, Özem Kalay, Güngör Budak, Kübra Narcı, Elif Acar Arslan, Richard Brown, Ivan J. Johnson, Alexey Dolgoborodov, Vladimir Semenyuk, Amit Jain, H. Serhat Tetikol, Varun Jain, Mike Ruehle, Bryan R. Lajoie, Cooper Roddey, Severine Catreux, Rami Mehio, Mian Umair Ahsan, Qian Liu, Kai Wang, Sayed Mohammad Ebrahim Sahraeian, Li Tai Fang, Marghoob Mohiyuddin, Calvin Hung, Chirag Jain, Hanying Feng, Zhipan Li, Luoqi Chen, Fritz J. Sedlazeck, Justin M. Zook - Cell Genomics 2022 被引用: 204
- Piercing the dark matter: bioinformatics of long-range sequencing and mapping
著者: Fritz J. Sedlazeck, Hayan Lee, Charlotte A. Darby, Michael C. Schatz - Nature Reviews Genetics 2018 被引用: 603
- Benchmarking challenging small variants with linked and long reads
著者: Justin Wagner, Nathan D. Olson, Lindsay Harris, Ziad Khan, Jesse Farek, Medhat Mahmoud, Ana Stanković, Vladimir Kovačević, Byunggil Yoo, Neil Miller, Jeffrey Rosenfeld, Bohan Ni, Samantha Zarate, Melanie Kirsche, Sergey Aganezov, Michael C. Schatz, Giuseppe Narzisi, Marta Byrska-Bishop, Wayne E. Clarke, Uday S. Evani, Charles Markello, Kishwar Shafin, Xin Zhou, Arend Sidow, Vikas Bansal, Peter Ebert, Tobias Marschall, Peter M. Lansdorp, Vincent C. T. Hanlon, Carl-Adam Mattsson, Álvaro Martínez Barrio, Ian T. Fiddes, Chunlin Xiao, Arkarachai Fungtammasan, Chen-Shan Chin, Aaron M. Wenger, William J. Rowell, Fritz J. Sedlazeck, Andrew Carroll, Marc Salit, Justin M. Zook - Cell Genomics 2022 被引用: 209
- Updating benchtop sequencing performance comparison
著者: Sebastian Jünemann, Fritz J. Sedlazeck, Karola Prior, Andreas Albersmeier, Uwe John, Jörn Kalinowski, Alexander Mellmann, Alexander Goesmann, Arndt von Haeseler, Jens Stoye, Dag Harmsen - Nature Biotechnology 2013 被引用: 508
- Simultaneous profiling of chromatin accessibility and methylation on human cell lines with nanopore sequencing
著者: Isac Lee, Roham Razaghi, Timothy Gilpatrick, Michael M. Molnar, Ariel Gershman, Norah Sadowski, Fritz J. Sedlazeck, Kasper D. Hansen, Jared T. Simpson, Winston Timp - Nature Methods 2020 被引用: 245
- Chromosome-scale, haplotype-resolved assembly of human genomes
著者: Shilpa Garg, Arkarachai Fungtammasan, Andrew Carroll, Mike Chou, Anthony D. Schmitt, Xiang Zhou, Stephen Mac, Paul Peluso, Emily Hatas, Jay Ghurye, Jared Maguire, Medhat Mahmoud, Haoyu Cheng, David N. Heller, Justin M. Zook, Tobias Moemke, Tobias Marschall, Fritz J. Sedlazeck, John Aach, Chen-Shan Chin, George M. Church, Heng Li - Nature Biotechnology 2020 被引用: 206
- Accelerated identification of disease-causing variants with ultra-rapid nanopore genome sequencing
著者: Sneha D. Goenka, John E. Gorzynski, Kishwar Shafin, Dianna G. Fisk, Trevor Pesout, Tanner Jensen, Jean Monlong, Pi-Chuan Chang, Gunjan Baid, Jonathan A. Bernstein, Jeffrey W. Christle, Karen Dalton, Daniel R. Garalde, Megan E. Grove, Joseph Guillory, Alexey Kolesnikov, Maria Nattestad, Maura Ruzhnikov, Mehrzad Samadi, Ankit Sethia, Elizabeth Spiteri, Christopher J. Wright, Katherine Xiong, Tong Zhu, Miten Jain, Fritz J. Sedlazeck, Andrew Carroll, Benedict Paten, Euan A. Ashley - Nature Biotechnology 2022 被引用: 120
