Deciphering the impact of genomic variation on function

著者: Writing group (ordered by contribution), J Engreitz, Heather A. Lawson, Harinder Singh, Lea M. Starita, Gary C. Hon, Hannah Carter, Nidhi Sahni, Timothy E. Reddy, Xihong Lin, Yun Li, Nikhil Munshi, Maria H. Chahrour, Alan P. Boyle, Benjamin C. Hitz, A Mortazavi, Mark Craven, Karen L. Mohlke, Luca Pinello, Ting Wang, Anshul Kundaje, Feng Yue, Sarah Cody, Nina Farrell, Michael I. Love, Lara A. Muffley, Michael J. Pazin, Fairlie Reese, Eric Van Buren, Working Group and Focus Group Co-Chairs (alphabetical by last name), Catalog, Kushal K. Dey, Characterization, Martin Kircher, Computational Analysis, Modeling, and Prediction, Jian Ma, Predrag Radivojac, Project Design, Brunilda Balliu, Mapping, Brian A. Williams, Networks, Danwei Huangfu, Standards and Pipelines, Cardiometabolic, Chong Y. Park, Thomas Quertermous, Cellular Programs and Networks, Jishnu Das, Coding Variants, Michael A. Calderwood, Douglas M. Fowler, Marc Vidal, CRISPR, Lucas Ferreira, Defining and Systematizing Function, Sean D. Mooney, Vikas Pejaver, Enumerating Variants, Jingjing Zhao, Evolution, Steven Gazal, Evan Koch, Steven K. Reilly, Shamil Sunyaev, Imaging, Anne E. Carpenter, Immune, Jason D. Buenrostro, Christina S. Leslie, Rachel E. Savage, Impact on Diverse Populations, Stefanija Giric, iPSC, Chongyuan Luo, Kathrin Plath, MPRA, Alejandro Barrera, Max Schubach, Noncoding Variants, Andreas R. Gschwind, Jill E. Moore, Neuro, Nadav Ahituv, Phenotypic Impact and Function, S. Stephen Yi, QTL/Statgen, Ingileif B. Hallgrímsdóttir, Kyle J. Gaulton, Saori Sakaue, Single Cell, Sina Booeshaghi, Eugenio Mattei, Surag Nair, Lior Pachter, Austin T. Wang, Characterization Awards (contact PI, MPIs (alphabetical by last name), other members (alphabetical by last name)), UM1HG011966, Jay Shendure, Vikram Agarwal, Andrew D. Blair, Theofilos Chalkiadakis, Florence M. Chardon, Pyaree Mohan Dash, Chengyu Deng, Nobuhiko Hamazaki, Pia Keukeleire, Connor Kubo, Jean‐Benoît Lalanne, Thorben Maaß, Beth Martin, Troy A. McDiarmid, Mai Nobuhara, Nicholas F. Page, Sam Regalado, Jasmine Sims, Aki Ushiki, UM1HG011969, Sabrina Best, G. E. Boyle, Nathan D. Camp, Silvia Casadei, Estelle Y. Da, Moez Dawood, Samantha C. Dawson, Shawn Fayer, Audrey Hamm, Richard G. James, Gail P. Jarvik, Abbye E. McEwen, Nick Moore, Sriram Pendyala, Nicholas A. Popp, Mason Post, Alan F. Rubin, Nahum Smith, Jeremy Stone, Malvika Tejura, Ziyu R. Wang, Melinda K. Wheelock, Ivan Woo, Brendan D. Zapp, UM1HG011972, Dulguun Amgalan, Aradhana Aradhana, Sophia M. Arana, Michael C. Bassik, Julia Bauman, Asmita Bhattacharya, Xiangmeng Shawn Cai, Ziwei Chen, Stephanie D. Conley, Salil Deshpande, Benjamin R. Doughty, Peter P. Du, James Galante, Casey A. Gifford, W Greenleaf, Katherine Guo, Revant Gupta, Sarasa Isobe, Evelyn Jagoda, Nimit Jain, Hank Jones, Helen Kang, Samuel H. Kim, YeEun Kim, Sandy Klemm, Ramen Kundu, Soumya Kundu, Mauro Lago‐Docampo, Yannick C. Lee-Yow, Roni Levin‐Konigsberg, Daniel Y. Li, Dominik Lindenhofer, X. Rosa, Georgi K. Marinov, Gabriella E. Martyn, Chloe V. McCreery, Eyal Metzl-Raz, João P. Monteiro, Michael T. Montgomery, Kristy S. Mualim, Chad J. Munger, Glen Munson, Tri C. Nguyen, Trieu Nguyen, Brian T. Palmisano, Anusri Pampari, Marlene Rabinovitch, Markus Ramste, Judhajeet Ray, Kevin Roy, Oriane Rubio, Julia M. Schaepe, Gavin R. Schnitzler, Jacob Schreiber, Disha Sharma, Maya U. Sheth, Huitong Shi, Vasundhara Singh, Riya Sinha, Lars M. Steinmetz, Jason Tan, Anthony Tan, Josh Tycko, Raeline Valbuena, Valeh Valiollah Pour Amiri, Mariëlle J. F. M. van Kooten, Alun Vaughan-Jackson, Anthony Venida, Chad S. Weldy, Matthew Worssam, Fan Xia, David Yao, Tony Zeng, Quanyi Zhao, Ronghao Zhou, UM1HG011989, Zitong Sam Chen, Beth A. Cimini, Georges Coppin, Atina G. Coté, Marzieh Haghighi, Tong Hao, David E. Hill, Jessica Lacoste, Florent Laval, Chloe Reno, Frederick P. Roth, Shantanu Singh, Kerstin Spirohn-Fitzgerald, Mikko Taipale, Tanisha Teelucksingh, Maxime Tixhon, Anupama Yadav, Zhipeng Yang, UM1HG011996, W. Lee Kraus, Daniel Armendariz, Ashley E Dederich, Ashlesha Gogate, Lauretta El Hayek, Sean C. Goetsch, Kiran Kaur, Hyung Bum Kim, Melissa K. McCoy, Mpathi Nzima, Carlos A. Pinzón-Arteaga, Bruce A. Posner, Daniel A. Schmitz, Sushama Sivakumar, Anjana Sundarrajan, Lei Wang, Yihan Wang, Jun Wu, Lin Xu, Jian Xu, Leqian Yu, Yanfeng Zhang, Huan Zhao, Qinbo Zhou, UM1HG012003, Hyejung Won, Jessica Bell, K. Alaine Broadaway, Katherine Degner, Amy S. Etheridge, Beverly H. Koller, Won Mah, Wancen Mu, Kimberly Ritola, Jonathan D. Rosen, Sarah A. Schoenrock, Rachel A. Sharp, UM1HG012010, Daniel E. Bauer, Guillaume Lettre, Richard I. Sherwood, Basheer Becerra, Logan J. Blaine, Eric Che, Matthew Francoeur, Ellie N. Gibbs, Nahye Kim, Emily M. King, Benjamin P. Kleinstiver, Estelle Lecluze, Zhijian Li, Z. Patel, Quang Vinh Phan, Jayoung Ryu, Marlena L. Starr, Ting Wu, UM1HG012053, Charles A. Gersbach, Gregory E. Crawford, Andrew S. Allen, William H. Majoros, Nahid Iglesias, Ruhi Rai, Revathy Venukuttan, Boxun Li, Taylor Anglen, Lexi R. Bounds, Marisa C. Hamilton, Siyan Liu, Sean R. McCutcheon, Christian D. McRoberts Amador, Samuel Reisman, Maria A. ter Weele, Josephine C. Bodle, Helen L. Streff, Keith Siklenka, Kari Strouse, Mapping Awards (contact PI, MPIs (alphabetical by last name), other members (alphabetical by last name)), UM1HG011986, B Bernstein, Juliana Babu, Guillermo Barreto Corona, Kevin Dong, Fabiana M. Duarte, Neva C. Durand, Charles B. Epstein, Kaili Fan, Elizabeth Gaskell, Amelia Weber Hall, Alexandra Ham, Mei K. Knudson, Noam Shoresh, Siddarth Wekhande, Cassandra White, Xi Wang, UM1HG012076, Ansuman T. Satpathy, M. Ryan Corces, Serena H. Chang, Iris M. Chin, James M. Gardner, Zachary A. Gardell, Jacob C. Gutierrez, Alia W. Johnson, Lucas Kampman, Maya Kasowski, Caleb A. Lareau, Vincent Liu, Leif S. Ludwig, Christopher S. McGinnis, Shreya Menon, Anita Qualls, Katalin Sándor, Adam W. Turner, Chun Ye, Yajie Yin, Wenxi Zhang, UM1HG012077, B Wold, Maria Carilli, Dayeon Cheong, Ghassan Filibam, Kim Y. Green, Shimako Kawauchi, Charlene Kim, Heidi Yahan Liang, Rebekah K. Loving, Laura Luebbert, Grant R. MacGregor, Ángel Gálvez Merchán, Elisabeth Rebboah, Narges Rezaie, Jasmine Sakr, Delaney K. Sullivan, Nikki Swarna, Diane Trout, Sean Upchurch, Ryan Weber, Predictive Modeling Awards (contact PI, MPIs (alphabetical by last name), other members (alphabetical by last name)), U01HG011952, Christopher P. Castro, Elysia Chou, Fan Feng, André Guerra, Yuanhao Huang, Linghua Jiang, Jie Liu, Ryan E. Mills, Weizhou Qian, Tingting Qin, Maureen A. Sartor, Rintsen N. Sherpa, Jinhao Wang, Yiqun Wang, Joshua D. Welch, Zhenhao Zhang, Nanxiang Zhao, U01HG011967, Sayan Mukherjee, C. David Page, Shannon Clarke, R Doty, Yuncheng Duan, Raluca Gordân, Kuei-Yueh Ko, Shengyu Li, Boyao Li, Alexander Thomson, U01HG012009, Soumya Raychaudhuri, Alkes L. Price, Thahmina A. Ali, Kushal K. Dey, Arun Durvasula, Manolis Kellis, Riya Sinha, Lilia M. Iakoucheva, Tulika Kakati, Yile Chen, Mariam Benazouz, Shantanu Jain, Daniel Zeiberg, M. Clara De Paolis Kaluza, Michelle Velyunskiy, U01HG012039, Audrey P. Gasch, Kunling Huang, Yiyang Jin, Qiongshi Lu, Jiacheng Miao, M Ohtake, Eduardo Scopel Ferreira da Costa, Robert D. Steiner, Yuriy Sverchkov, U01HG012064, Zhiping Weng, Manuel Garber, Y. Fu, Natalie Haas, Xihao Li, Nishigandha Phalke, Shuo Shan, Nicole Shedd, Tianxiong Yu, Yi Zhang, Hufeng Zhou, U01HG012069, Alexis Battle, Livnat Jerby‐Arnon, Eran Kotler, Soumya Kundu, Andrew R. Marderstein, Stephen B. Montgomery, AkshatKumar Nigam, Evin M. Padhi, Aman Patel, Jonathan K. Pritchard, Ivy Raine, Vivekanandan Ramalingam, Kameron B. Rodrigues, Jacob Schreiber, Arpita Singhal, Riya Sinha, Austin T. Wang, Network Projects (contact PI, MPIs (alphabetical by last name), other members (alphabetical by last name)), U01HG012041, Marisa Abundis, Deepa Bisht, Trirupa Chakraborty, Jing‐Yu Fan, David R. Hall, Zarifeh Heidari Rarani, Abhinav K. Jain, Babita Kaundal, Swapnil Keshari, Daniel J. McGrail, Nicholas A. Pease, Vivian Fang Yi, U01HG012047, Hao Wu, Sreeram Kannan, Hongjun Song, Jingli Cai, Ziyue Gao, Ronni Kurzion, Julia I-Ju Leu, Fan Li, Dongming Liang, Guo‐li Ming, Kiran Musunuru, Qi Qiu, Junwei Shi, Yijing Su, Sarah A. Tishkoff, Ning Xie, Qian Yang, Wenli Yang, Hongjie Zhang, Zhijian Zhang, U01HG012051, M Beer, Anna‐Katerina Hadjantonakis, Sharon Adeniyi, Hyunwoo Cho, Ronald Cutler, Rachel A. Glenn, David Godovich, Nan Hu, Svetlana Jovanić, Renhe Luo, Jin Woo Oh, Milad Razavi-Mohseni, Dustin Shigaki, Simone Sidoli, Thomas Vierbuchen, Xianming Wang, Breanna Williams, Jielin Yan, Dapeng Yang, Yunxiao Yang, U01HG012059, Maike Sander, Kyle J. Gaulton, Bing Ren, Weronika M. Bartosik, Hannah S. Indralingam, Adam Klie, Hannah M Mummey, Mei-Lin Okino, Gaowei Wang, Nathan R. Zemke, Kai Zhang, Han Zhu, U01HG012079, Noah Zaitlen, Jason Ernst, Justin Langerman, Terence Li, Yu Sun, U01HG012103, Alexander Y. Rudensky, Preethi Periyakoil, Vianne R. Gao, Melanie H. Smith, Norman M. Thomas, Laura T. Donlin, Amit Lakhanpal, Kaden M. Southard, Rico Chandra Ardy, U24HG012012, J. Michael Cherry, Mark Gerstein, Kalina Andreeva, Pedro Assis, Beatrice Borsari, Eric Douglass, Shengcheng Dong, Idan Gabdank, Keenan Graham, Otto Jolanki, Jennifer Jou, Meenakshi S. Kagda, Jin-Wook Lee, Mingjie Li, Khine Lin, Stuart R. Miyasato, Joel Rozowsky, Corinn Small, Emma Spragins, Forrest Y. Tanaka, Ian Whaling, Ingrid Youngworth, Cricket A. Sloan, U24HG012070, Eddie Belter, Xintong Chen, Rex L. Chisholm, Patricia Dickson, Changxu Fan, Lucinda Fulton, Daofeng Li, Tina Lindsay, Yu Luan, Yuan Luo, Huijue Lyu, Xiaowen Ma, Juan F Macias-Velasco, Karen H. Miga, Kara Quaid, Nathan O. Stitziel, Barbara E. Stranger, Chad Tomlinson, Juan Wang, Wenjin Zhang, Bo Zhang, Guoyan Zhao, Xiaoyu Zhuo, IGVF Affiliate Member Projects (contact PIs, other members (alphabetical by last name)), Brennand lab, Kristen Brennand, Ciccia lab, Alberto Ciccia, Samuel B. Hayward, Jen‐Wei Huang, Giuseppe Leuzzi, Angelo Taglialatela, Tanay Thakar, Alina Vaitsiankova, Dey lab, Kushal K. Dey, Thahmina A. Ali, Gazal lab, Artem Kim, Grimes lab, H. Leighton Grimes, Nathan Salomonis, Gupta lab, Rajat M. Gupta, Shi Fang, Vivian S. Lee, Heinig lab, Matthias Heinig, Corinna Losert, Jones lab, Thouis R. Jones, Elisa Donnard, M. Murphy, Elizabeth S. Roberts, Susie Song, Moore lab, Mostafavi lab, Sara Mostafavi, Alexander Sasse, Anna Spiro, Pennacchio and Visel lab, L Pennacchio, Momoe Kato, Michael Kosicki, Brandon J. Mannion, Neil Slaven, Axel Visel, Pollard lab, Katherine S. Pollard, Shiron Drusinsky, Sean Whalen, Ray lab, John Ray, Ingrid A. Harten, Ching‐Huang Ho, Reilly lab, Sanjana lab, Neville E. Sanjana, Christina M. Caragine, John Morris, Seruggia lab, Davide Seruggia, Ana P. Kutschat, Sandra Wittibschlager, Xu lab, Han Xu, Rongjie Fu, Wei He, Liang Zhang, Yi lab, Daniel Osorio, NHGRI Program Management (alphabetical by last name), Zo Bly, Stephanie Calluori, Daniel A. Gilchrist, Carolyn M. Hutter, Stephanie A. Morris, Ella K. Samer - Nature 2024 被引用: 84