Can Alkan

Active 2003–2026

109
Papers
36,194
Citations
64
h-index
84
i10-index

Citations

Citations per year for Can Alkan1985: 1 citations1987: 1 citations1992: 4 citations1993: 2 citations1996: 3 citations1999: 1 citations2000: 1 citations2002: 1 citations2003: 5 citations2004: 11 citations2005: 28 citations2006: 19 citations2007: 20 citations2008: 56 citations2009: 137 citations2010: 265 citations2011: 548 citations2012: 686 citations2013: 631 citations2014: 664 citations2015: 674 citations2016: 695 citations2017: 620 citations2018: 597 citations2019: 1,223 citations2020: 1,189 citations2021: 1,150 citations2022: 884 citations2023: 760 citations2024: 930 citations2025: 480 citations2026: 67 citations1986: no citations, so this year is not shown1988–1991: no citations, so these years are not shown1994–1995: no citations, so these years are not shown1997–1998: no citations, so these years are not shown2001: no citations, so this year is not shown

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 4,824 citing papers, 25.4% of this breakdownUnited Kingdom: 1,529 citing papers, 8.1% of this breakdownChina: 1,342 citing papers, 7.1% of this breakdownGermany: 1,175 citing papers, 6.2% of this breakdownCanada: 712 citing papers, 3.7% of this breakdownFrance: 683 citing papers, 3.6% of this breakdownItaly: 643 citing papers, 3.4% of this breakdownAustralia: 597 citing papers, 3.1% of this breakdownSpain: 550 citing papers, 2.9% of this breakdownNetherlands: 491 citing papers, 2.6% of this breakdownSweden: 423 citing papers, 2.2% of this breakdownSwitzerland: 399 citing papers, 2.1% of this breakdown
0%25.4%Other 29.6%

Fields

  • Biochemistry, Genetics and Molecular Biology56.9%
  • Medicine21.7%
  • Agricultural and Biological Sciences6.5%
  • Computer Science4%
  • Neuroscience3.1%
  • Immunology and Microbiology1.7%
  • Other6.1%

Topics

  • Genomics and Phylogenetic Studies8.9%
  • Amyotrophic Lateral Sclerosis Research5.2%
  • Chromosomal and Genetic Variations4.2%
  • Genomic variations and chromosomal abnormalities4.2%
  • Genomics and Rare Diseases3.6%
  • Genetic diversity and population structure3.3%
  • Other70.6%

Coauthors

All papers

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  1. High-coverage whole-genome sequencing of the expanded 1000 Genomes Project cohort including 602 trios

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Mark Gerstein, Kai Ye, Qihui Zhu, Feyza Yilmaz, Chunlin Xiao, Paul Flicek, Søren Germer, Harrison Brand, Ira M. Hall, Michael E. Talkowski, Giuseppe Narzisi, Michael C. Zody - Cell 2022 cited by 1,079

  2. A Hexanucleotide Repeat Expansion in C9ORF72 Is the Cause of Chromosome 9p21-Linked ALS-FTD

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , David Sondervan, Harro Seelaar, Derek J. Blake, Kate Young, Nicola Halliwell, Janis Bennion Callister, Greg Toulson, Anna Richardson, Alexander Gerhard, Julie S. Snowden, David Mann, David Neary, Michael A. Nalls, Terhi Peuralinna, Lilja Jansson, Veli‐Matti Isoviita, Anna-Lotta Kaivorinne, Maarit Hölttä‐Vuori, Elina Ikonen, Raimo Sulkava, Michael Benatar, Joanne Wuu, Adriano Chiò, Gabriella Restagno, Giuseppe Borghero, Mario Sabatelli, David Heckerman, Ekaterina Rogaeva, Lorne Zinman, Jeffrey D. Rothstein, Michael Sendtner, Carsten Drepper, Evan E. Eichler, Can Alkan, Ziedulla Abdullaev, Svetlana Pack, Amalia Dutra, Evgenia Pak, John Hardy, Andrew Singleton, Nigel Williams, Peter Heutink, Stuart Pickering‐Brown, Huw R. Morris, Pentti J. Tienari, Bryan J. Traynor - Neuron 2011 cited by 4,469

  3. An integrated map of structural variation in 2,504 human genomes

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Taejeong Bae, Eliza Cerveira, Peter S. Chines, Zechen Chong, Laura Clarke, Elif Dal, Li Ding, Sarah B. Emery, Xian Fan, Madhusudan Gujral, Fatma Kahveci, Jeffrey M. Kidd, Yu Kong, Eric-Wubbo Lameijer, Shane McCarthy, Paul Flicek, Richard A. Gibbs, Gábor Marth, Christopher E. Mason, Androniki Menelaou, Donna M. Muzny, Bradley J. Nelson, Amina Noor, Nicholas F. Parrish, Matthew Pendleton, Andrew Quitadamo, Benjamin Raeder, Eric E. Schadt, Mallory Romanovitch, Andreas Schlattl, Robert Sebra, Andrey A. Shabalin, Andreas Untergasser, Jerilyn A. Walker, Min Wang, Fuli Yu, Chengsheng Zhang, Jing Zhang, Xiangqun Zheng-Bradley, Wanding Zhou, Thomas Zichner, Jonathan Sebat, Mark A. Batzer, Steven A. McCarroll, Ryan E. Mills, Mark Gerstein, Ali Bashir, Oliver Stegle, Scott E. Devine, Charles Lee, Evan E. Eichler, Jan O. Korbel - Nature 2015 cited by 2,695

  4. A Draft Sequence of the Neandertal Genome

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Nathaniel Novod, Jason P. Affourtit, Michael D. Miller, Christine Verna, Pavao Rudan, Dejana Brajković, Željko Kućan, Ivan Gušić, Vladimir B. Doronichev, Liubov V. Golovanova, Carles Lalueza‐Fox, Marco de la Rasilla Vives, Javier Fortea, Antonio Rosas, Ralf W. Schmitz, Philip L. Johnson, Evan E. Eichler, Daniel Falush, Ewan Birney, James C. Mullikin, Montgomery Slatkin, Rasmus Nielsen, Janet Kelso, Michael Lachmann, David Reich, Svante Pääbo - Science 2010 cited by 4,594

  5. Genome structural variation discovery and genotyping

    Authors: , , - Nature Reviews Genetics 2011 cited by 1,719

  6. A High-Coverage Genome Sequence from an Archaic Denisovan Individual

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Montgomery Slatkin, David Reich, Janet Kelso, Svante Pääbo - Science 2012 cited by 2,148

  7. A robust benchmark for detection of germline large deletions and insertions

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Arda Söylev, Michael C. Schatz, Shilpa Garg, George M. Church, Tobias Marschall, Ken Chen, Xian Fan, Adam C. English, Jeffrey Rosenfeld, Weichen Zhou, Ryan E. Mills, Jay M. Sage, Jennifer R. Davis, Michael D. Kaiser, John S. Oliver, Anthony P. Catalano, Mark Chaisson, Noah Spies, Fritz J. Sedlazeck, Marc Salit - Nature Biotechnology 2020 cited by 483

  8. Genetic history of an archaic hominin group from Denisova Cave in Siberia

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , - Nature 2010 cited by 2,043

  9. Mapping copy number variation by population-scale genome sequencing

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Ruibang Luo, Xinmeng Jasmine Mu, James Nemesh, Heather E. Peckham, Tobias Rausch, Aylwyn Scally, Xinghua Shi, Michael P. Strömberg, Adrian M. Stütz, Alexander E. Urban, Jerilyn A. Walker, Jiantao Wu, Yujun Zhang, Zhengdong D. Zhang, Mark A. Batzer, Li Ding, Gábor Marth, Gil McVean, Jonathan Sebat, M Snyder, Jun Wang, Kenny Ye, Evan E. Eichler, Mark Gerstein, Matthew E. Hurles, Charles Lee, Steven A. McCarroll, Jan O. Korbel - Nature 2011 cited by 1,215

  10. GRIM-Filter: Fast Seed Location Filtering in DNA Read Mapping Using Processing-in-Memory Technologies

    Authors: , , , , , , , , , - BMC Genomics, BMC Genom. 2018 cited by 158

  11. Great ape genetic diversity and population history

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Marc Dabad, Michael L. Wilson, Laurie S. Stevison, Cristina Camprubí, Tiago Carvalho, Aurora Ruiz‐Herrera, Laura Vives, Marta Melé, Teresa Abelló, Ivanela Kondova, Ronald E. Bontrop, Anne E. Pusey, Felix Lankester, John Kiyang, Richard A. Bergl, Elizabeth V. Lonsdorf, Simon Myers, Mario Ventura, Pascal Gagneux, David Comas, Hans R. Siegismund, Julie Blanc, Lidia Agueda-Calpena, Marta Gut, Lucinda Fulton, Sarah A. Tishkoff, James C. Mullikin, Richard K. Wilson, Marta Gut, Mary Katherine Gonder, Oliver A. Ryder, Beatrice H. Hahn, Arcadi Navarro, Joshua M. Akey, Jaume Bertranpetit, David Reich, Thomas Mailund, Mikkel Heide Schierup, Christina Hvilsom, Aida M. Andrés, Jeffrey D. Wall, Carlos D. Bustamante, Michael F. Hammer, Evan E. Eichler, Tomàs Marquès‐Bonet - Nature 2013 cited by 995

  12. Accelerating Genome Analysis: A Primer on an Ongoing Journey

    Authors: , , , , , , - IEEE Micro 2020 cited by 80

  13. Nanopore sequencing technology and tools for genome assembly: computational analysis of the current state, bottlenecks and future directions

    Authors: , , , , - Briefings in Bioinformatics, Briefings Bioinform. 2018 cited by 260

  14. Limitations of next-generation genome sequence assembly

    Authors: , , - Nature Methods 2010 cited by 779

  15. Diversity of Human Copy Number Variation and Multicopy Genes

    Authors: , , , , , , , , , , - Science 2010 cited by 719

  16. Personalized copy number and segmental duplication maps using next-generation sequencing

    Authors: , , , , , , , , , , , , - Nature Genetics 2009 cited by 776

  17. Genome Sequencing Highlights the Dynamic Early History of Dogs

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , - PLoS Genetics 2014 cited by 649

  18. Shifted Hamming distance: a fast and accurate SIMD-friendly filter to accelerate alignment verification in read mapping

    Authors: , , , , , , - Bioinformatics, Bioinform. 2015 cited by 98

  19. Fast characterization of segmental duplication structure in multiple genome assemblies

    Authors: , , , - Algorithms for Molecular Biology, Algorithms Mol. Biol. 2022 cited by 87

  20. Insights into hominid evolution from the gorilla genome sequence

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Emre Karakoç, Anja Kolb‐Kokocinski, Gavin K. Laird, Gerton Lunter, Stephen Meader, Matthew Mort, James C. Mullikin, Kasper Munch, Timothy D. O’Connor, Andrew D. Phillips, Javier Prado-Martinez, Anthony S. Rogers, Saba Sajjadian, Dominic Schmidt, Katy Shaw, Jared T. Simpson, Peter D. Stenson, Daniel J. Turner, Linda Vigilant, Albert J. Vilella, Weldon Whitener, Baoli Zhu, D.N. Cooper, Pieter de Jong, Emmanouil T. Dermitzakis, Evan E. Eichler, Paul Flicek, Nick Goldman, Nicholas I. Mundy, Zemin Ning, Duncan T. Odom, Chris P. Ponting, Michael A. Quail, Oliver A. Ryder, Stephen M. J. Searle, Wesley C. Warren, Richard K. Wilson, Mikkel Heide Schierup, Jane Rogers, Chris Tyler‐Smith, Richard Durbin - Nature 2012 cited by 814

  21. The bonobo genome compared with the chimpanzee and human genomes

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Michael Siebauer, Jeffrey M. Good, Anne Fischer, Susan E. Ptak, Michael Lachmann, David E. Symer, Thomas Mailund, Mikkel Heide Schierup, Aida M. Andrés, Janet Kelso, Svante Pääbo - Nature 2012 cited by 599

  22. Activating mutations of STAT5B and STAT3 in lymphomas derived from γδ-T or NK cells

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , - Nature Communications 2015 cited by 390

  23. Computational Pan-Genomics: Status, Promises and Challenges

    Authors: , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Jan O. Korbel, Eric-Wubbo Lameijer, Ben Langmead, Marcel Martin, Paul Medvedev, John C. Mu, Pieter B. Neerincx, Klaasjan G. Ouwens, Pierre Peterlongo, Nadia Pisanti, Sven Rahmann, Benjamin J. Raphael, Knut Reinert, Dick de Ridder, Jeroen de Ridder, Matthias Schlesner, Ole Schulz-Trieglaff, Ashley D. Sanders, Siavash Sheikhizadeh, Carl Shneider, Sandra Smit, Daniel Valenzuela, Jiayin Wang, Lodewyk F.A. Wessels, Ying Zhang, Victor Guryev, Fabio Vandin, Kai Ye, Alexander Schönhuth - 2016 cited by 151

  24. Targeting PLK1 overcomes T-DM1 resistance via CDK1-dependent phosphorylation and inactivation of Bcl-2/xL in HER2-positive breast cancer

    Authors: , , , , , , , , , , - Oncogene 2018 cited by 81