Clarence Lee
Active 2008–2026
- 30
- Papers
- 26,401
- Citations
- 24
- h-index
- 27
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology70.2%
- Medicine21.5%
- Immunology and Microbiology1.7%
- Agricultural and Biological Sciences1.4%
- Neuroscience1%
- Engineering1%
- Other3.2%
Topics
- Cancer Genomics and Diagnostics12.6%
- Single-cell and spatial transcriptomics6.8%
- Lung Cancer Treatments and Mutations2.8%
- Genomics and Phylogenetic Studies2.8%
- Cancer Cells and Metastasis2.7%
- Genetic factors in colorectal cancer2.5%
- Other69.8%
Coauthors
- Timothy T. Harkins9
- Heather E. Peckham7
- Kevin McKernan6
- Carlos D. Bustamante4
- Francisco M. De La Vega3
- Stephen F. McLaughlin3
- Swati Ranade3
- Adam H. Freedman2
- Adam R. Boyko2
- Adam Siepel2
- Alan J. Schafer2
- Alena A Antipova2
- Andrew G. Clark2
- André Franke2
- Anita L Steptoe2
- Aravinda Chakravarti2
- Bartha Maria Knoppers2
- Belén Lorente-Galdós2
- Brenna M. Henn2
- Brooke Gardiner2
- Can Alkan2
- Carles Vilà2
- Cheston Tan2
- Christopher R. Clouser2
All papers
- Detection of Circulating Tumor DNA in Early- and Late-Stage Human Malignancies
Authors: Chetan Bettegowda, Mark Sausen, Rebecca Leary, Isaac Kinde, Yuxuan Wang, Nishant Agrawal, Bjarne R. Bartlett, Hao Wang, Brandon Luber, Rhoda M. Alani, Emmanuel S. Antonarakis, Nilofer S. Azad, Alberto Bardelli, Henry Brem, John L. Cameron, Clarence Lee, Leslie A. Fecher, Gary L. Gallia, Peter Gibbs, Dung T. Le, Robert Giuntoli, Michael Goggins, Michael D. Hogarty, Matthias Holdhoff, Seung‐Mo Hong, Yuchen Jiao, Hartmut Juhl, Jaeyeon Kim, Giulia Siravegna, Daniel A. Laheru, Calogero Lauricella, Michael Lim, Evan J. Lipson, Suely Kazue Nagahashi Marie, George J. Netto, Kelly S. Oliner, Alessandro Olivi, Louise Olsson, Gregory J. Riggins, Andrea Sartore‐Bianchi, Kerstin Schmidt, le-Ming Shih, Sueli Mieko Oba‐Shinjo, Salvatore Siena, Dan Theodorescu, Jeanne Tie, Timothy T. Harkins, Silvio Veronese, Tian‐Li Wang, Jon Weingart, Christopher L. Wolfgang, Laura D. Wood, Dongmei Xing, Ralph H. Hruban, Jian Wu, Peter J. Allen, C. Max Schmidt, Michael A. Choti, Victor E. Velculescu, Kenneth W. Kinzler, Bert Vogelstein, Nickolas Papadopoulos, Luis A. Díaz - Science Translational Medicine 2014 cited by 5,110
- mRNA-Seq whole-transcriptome analysis of a single cell
Authors: Fuchou Tang, Cátálin Bárbácioru, Yangzhou Wang, Ellen Nordman, Clarence Lee, Nanlan Xu, Xiaohui Wang, John Bodeau, Brian B. Tuch, Asim Siddiqui, Kaiqin Lao, M. Azim Surani - Nature Methods 2009 cited by 4,036
- Spatial and temporal diversity in genomic instability processes defines lung cancer evolution
Authors: Elza C. de Bruin, Nicholas McGranahan, Richard Mitter, Max Salm, David C. Wedge, Lucy Yates, Mariam Jamal‐Hanjani, Seema Shafi, Nirupa Murugaesu, Andrew J. Rowan, Eva Grönroos, Madiha A. Muhammad, Stuart Horswell, Marco Gerlinger, Ignacio Varela, David Jones, John L. Marshall, Thierry Voet, Peter Van Loo, Doris M. Rassl, Robert C. Rintoul, Sam M. Janes, Siow Ming Lee, Martin Förster, Tanya Ahmad, David Lawrence, Mary Falzon, Arrigo Capitanio, Timothy T. Harkins, Clarence Lee, Warren Tom, Enock Teefe, Shann-Ching Chen, Sharmin Begum, Adam Rabinowitz, Benjamin Phillimore, Bradley Spencer‐Dene, Gordon Stamp, Zoltán Szállási, Nik Matthews, Aengus Stewart, Peter J. Campbell, Charles Swanton - Science 2014 cited by 1,170
- Demographic history and rare allele sharing among human populations
Authors: Simon Gravel, Brenna M. Henn, Ryan N. Gutenkunst, Amit Indap, Gábor Marth, Andrew G. Clark, Fuli Yu, Richard A. Gibbs, The 1000 Genomes Project, Carlos D. Bustamante, David L. Altshuler, Richard Durbin, Gonçalo R. Abecasis, David R. Bentley, Aravinda Chakravarti, Andrew G. Clark, Francis S. Collins, Francisco M. De La Vega, Peter Donnelly, Michael Egholm, Paul Flicek, Stacey Gabriel, Richard A. Gibbs, Bartha Maria Knoppers, Eric S. Lander, Hans Lehrach, Elaine R. Mardis, Gil McVean, Debbie A. Nickerson, Leena Peltonen, Alan J. Schafer, Stephen T. Sherry, Jun Wang, Richard K. Wilson, Richard A. Gibbs, David Rio Deiros, Mike Metzker, Donna M. Muzny, Jeff Reid, David A. Wheeler, Jun Wang, Jingxiang Li, Min Jian, Guoqing Li, Ruiqiang Li, Huiqing Liang, Geng Tian, Bó Wáng, Jian Wang, Wei Wang, Huanming Yang, Xiuqing Zhang, Huisong Zheng, Eric S. Lander, David L. Altshuler, Lauren Ambrogio, Toby Bloom, Kristian Cibulskis, Tim J. Fennell, Stacey B. Gabriel, David B. Jaffe, Erica Shefler, Carrie Sougnez, David R. Bentley, Niall Gormley, Sean Humphray, Zoya Kingsbury, Paula Koko-Gonzales, Jennifer Stone, Kevin McKernan, Gina L. Costa, Jeffry K. Ichikawa, Clarence Lee, Ralf Sudbrak, Hans Lehrach, Tatiana Borodina, Andreas Dahl, Alexey N. Davydov, P Marquardt, Florian Mertes, Wilfiried Nietfeld, Philip Rosenstiel, Stefan Schreiber, Aleksey V. Soldatov, Bernd Timmermann, Marius Tolzmann, Michael Egholm, Jason P. Affourtit, Dana Ashworth, Said Attiya, Melissa Bachorski, Eli Buglione, Adam Burke, Amanda Caprio, Christopher Celone, Shauna Clark, David Conners, Brian Desany, Lisa Gu, Lorri Guccione and 461 more - National Academy of Sciences, Proceedings of the National Academy of Sciences 2011 cited by 733
- Genome Sequencing Highlights the Dynamic Early History of Dogs
Authors: Adam H. Freedman, Ilan Gronau, Rena M. Schweizer, Diego Ortega‐Del Vecchyo, Eunjung Han, Pedro Silva, Marco Galaverni, Zhenxin Fan, Péter Marx, Belén Lorente-Galdós, Holly C. Beale, Óscar Ramírez, Farhad Hormozdiari, Can Alkan, Carles Vilà, Kevin Squire, Eli Geffen, Josip Kusak, Adam R. Boyko, Heidi G. Parker, Clarence Lee, Vasisht Tadigotla, Adam Siepel, Carlos D. Bustamante, Timothy T. Harkins, Stanley F. Nelson, Elaine A. Ostrander, Tomàs Marquès‐Bonet, Robert K. Wayne, John Novembre - PLoS Genetics 2014 cited by 649
- A small-cell lung cancer genome with complex signatures of tobacco exposure
Authors: Erin Pleasance, Philip J. Stephens, Sarah O’Meara, David J. McBride, Alison Meynert, David Jones, Meng‐Lay Lin, David Beare, King Wai Lau, Chris Greenman, Ignacio Varela, Serena Nik‐Zainal, Helen Davies, Gonzalo R. Ordóñez, Laura Mudie, Calli Latimer, Sarah Edkins, Lucy Stebbings, Lina Chen, Mingming Jia, Catherine Leroy, John Marshall, Andrew Menzies, Adam P. Butler, Jon W. Teague, Jonathon Mangion, Yongming Sun, Stephen F. McLaughlin, Heather E. Peckham, Eric F. Tsung, Gina L. Costa, Clarence Lee, John D. Minna, Adi F. Gazdar, Ewan Birney, Michael D. Rhodes, Kevin McKernan, Michael R. Stratton, P. Andrew Futreal, Peter J. Campbell - Nature 2009 cited by 1,069
- Carrier Testing for Severe Childhood Recessive Diseases by Next-Generation Sequencing
Authors: Callum J. Bell, Darrell L. Dinwiddie, Neil Miller, Shannon Hateley, Elena E. Ganusova, Joann Mudge, Ray J. Langley, Lu Zhang, Clarence Lee, Faye Schilkey, Vrunda Sheth, Jimmy E. Woodward, Heather E. Peckham, Gary P. Schroth, Ryan W. Kim, Stephen F. Kingsmore - Science Translational Medicine 2011 cited by 712
- Stem cell transcriptome profiling via massive-scale mRNA sequencing
Authors: Nicole Cloonan, Alistair R. R. Forrest, Gabriel Kolle, Brooke Gardiner, Geoffrey J. Faulkner, Mellissa Brown, Darrin F. Taylor, Anita L Steptoe, Shivangi Wani, Graeme Bethel, Alan J. Robertson, Andrew C. Perkins, Stephen J. Bruce, Clarence Lee, Swati Ranade, Heather E. Peckham, Jonathan M. Manning, Kevin McKernan, Sean M. Grimmond - Nature Methods 2008 cited by 1,040
- Development of Personalized Tumor Biomarkers Using Massively Parallel Sequencing
Authors: Rebecca Leary, Isaac Kinde, Frank Diehl, Kerstin Schmidt, Chris Clouser, Cisilya Duncan, Alena A Antipova, Clarence Lee, Kevin McKernan, Francisco M. De La Vega, Kenneth W. Kinzler, Bert Vogelstein, Luis A. Díaz, Victor E. Velculescu - Science Translational Medicine 2010 cited by 517
- Sequence and structural variation in a human genome uncovered by short-read, massively parallel ligation sequencing using two-base encoding
Authors: Kevin McKernan, Heather E. Peckham, Gina L. Costa, Stephen F. McLaughlin, Yutao Fu, Eric F. Tsung, Christopher R. Clouser, Cisyla Duncan, Jeffrey K. Ichikawa, Clarence Lee, Zheng Zhang, Swati Ranade, Eileen T. Dimalanta, Fiona Hyland, Tanya Sokolsky, Lei Zhang, Andrew Sheridan, Haoning Fu, Cynthia L. Hendrickson, Bin Li, Lev Kotler, Jeremy R Stuart, Joel A. Malek, Jonathan M. Manning, Alena A Antipova, Damon S. Perez, Michael P. Moore, Kathleen Hayashibara, M.R. Lyons, Robert E. Beaudoin, Brittany E. Coleman, Michael W. Laptewicz, Adam E. Sannicandro, Michael D. Rhodes, Rajesh Gottimukkala, Shan Yang, Vineet Bafna, Ali Bashir, Andrew R. MacBride, Can Alkan, Jeffrey M. Kidd, Evan E. Eichler, Martin G. Reese, Francisco M. De La Vega, Alan P. Blanchard - Genome Research 2009 cited by 524
- Human β Cell Transcriptome Analysis Uncovers lncRNAs That Are Tissue-Specific, Dynamically Regulated, and Abnormally Expressed in Type 2 Diabetes
Authors: Ignasi Morán, İldem Akerman, Martijn van de Bunt, Ruiyu Xie, Marion Benazra, Takao Nammo, Luís Arnes, Nikolina Nakić, Javier García-Hurtado, Santiago A. Rodríguez‐Seguí, Lorenzo Pasquali, Claire Sauty-Colace, Anthony Beucher, Raphaël Scharfmann, Joris van Arensbergen, Paul R V Johnson, Andrew Berry, Clarence Lee, Timothy T. Harkins, Valéry Gmyr, François Pattou, Julie Kerr‐Conte, Lorenzo Piemonti, Thierry Berney, Neil A. Hanley, Anna L. Gloyn, Lori Sussel, Linda Langman, Kenneth L. Brayman, Maike Sander, Mark I. McCarthy, Philippe Ravassard, Jorge Ferrer - Cell Metabolism 2012 cited by 463
- MicroRNAs and their isomiRs function cooperatively to target common biological pathways
Authors: Nicole Cloonan, Shivangi Wani, Qinying Xu, Jian Gu, Kristi Lea, Sheila J. Heater, Cátálin Bárbácioru, Anita L Steptoe, Hilary C. Martin, Ehsan Nourbakhsh, Keerthana Krishnan, Brooke Gardiner, Xiaohui Wang, Kátia Nones, Jason A. Steen, Nicholas Matigian, David Wood, Karin S. Kassahn, Nicola Waddell, Jill Shepherd, Clarence Lee, Jeff Ichikawa, Kevin McKernan, Kelli Bramlett, Scott Kuersten, Sean M. Grimmond - Genome biology 2011 cited by 348
- Rapid 16S rRNA Next-Generation Sequencing of Polymicrobial Clinical Samples for Diagnosis of Complex Bacterial Infections
Authors: Stephen J. Salipante, Dhruba J. SenGupta, Christopher Rosenthal, Gina L. Costa, Jessica Spangler, Elizabeth H. Sims, Michael A. Jacobs, Samuel I. Miller, Daniel R. Hoogestraat, Brad T. Cookson, Connor O. McCoy, F. A. Matsen, Jay Shendure, Clarence Lee, Timothy T. Harkins, Noah G. Hoffman - PLoS ONE 2013 cited by 220
- Chromatin and sequence features that define the fine and gross structure of genomic methylation patterns
Authors: John R. Edwards, Anne O’Donnell‐Luria, Robert A. Rollins, Heather E. Peckham, Clarence Lee, Maria H. Milekic, Benjamin Chanrion, Yutao Fu, Tao Su, Hanina Hibshoosh, Jay A. Gingrich, Fatemeh Haghighi, Robert C. Nutter, Timothy H. Bestor - Genome Research 2010 cited by 192
- Molecular assessment of differences in the duodenal microbiome in subjects with irritable bowel syndrome
Authors: Evangelos J. Giamarellos‐Bourboulis, Jie Tang, Emmannouil Pyleris, Aikaterini Pistiki, Charalambos Barbatzas, Jordan Brown, Clarence Lee, Timothy T. Harkins, Gene Kim, Stacy Weitsman, Gillian M. Barlow, Vincent Funari, Mark Pimentel - Scandinavian Journal of Gastroenterology 2015 cited by 104
- Evaluating the Generation of Spatial Relations in Text and Image Generative Models
Authors: Shang Hong Sim, Clarence Lee, Alvin Tan, Cheston Tan - arXiv (Cornell University), CoRR 2024 cited by 4
- Rapid whole-genome mutational profiling using next-generation sequencing technologies
Authors: Douglas R. Smith, Aaron R. Quinlan, Heather E. Peckham, Kathryn Makowsky, Wei Tao, Betty Woolf, Lei Shen, William F. Donahue, Nadeem Tusneem, Michael P. Strömberg, Donald A. Stewart, Lu Zhang, Swati Ranade, Jason Warner, Clarence Lee, B E Coleman, Zheng Zhang, Stephen F. McLaughlin, Joel A. Malek, Jon M. Sorenson, Alan P. Blanchard, Jarrod Chapman, David R. Hillman, Feng Chen, Daniel S. Rokhsar, Kevin McKernan, Thomas W. Jeffries, Gábor Marth, Paul M. Richardson - Genome Research 2008 cited by 266
- Genomic and transcriptomic plasticity in treatment-naïve ovarian cancer
Authors: Marlous Hoogstraat, Mirjam S. de Pagter, Geert A. Cirkel, Markus J. van Roosmalen, Timothy T. Harkins, Karen Duran, Jennifer Kreeftmeijer, Ivo Renkens, Petronella O. Witteveen, Clarence Lee, Isaäc J. Nijman, Tanisha Guy, Ruben van ‘t Slot, Trudy N. Jonges, Martijn P. Lolkema, Marco J. Koudijs, Ronald P. Zweemer, Emile E. Voest, Edwin Cuppen, Wigard P. Kloosterman - Genome Research 2013 cited by 85
- Using Deep Learning to Overcome Privacy and Scalability Issues in Customer Data Transfer
Authors: Piyush Anand, Clarence Lee - Marketing Science, Mark. Sci. 2020 cited by 24
- IB-GAN: A Unified Approach for Multivariate Time Series Classification under Class Imbalance
Authors: Grace Deng, Cuize Han, Tommaso Dreossi, Clarence Lee, David S. Matteson - Society for Industrial and Applied Mathematics eBooks, SDM 2022 cited by 12
- A map of human genome variation from population-scale sequencing
Authors: Richard Durbin, David L. Altshuler, Gonçalo R. Abecasis, David Bentley, Aravinda Chakravarti, Andrew G. Clark, Francis S. Collins, Francisco M. De La Vega, Peter Donnelly, Michael D. Miller, Paul Flicek, Stacey B. Gabriel, Richard A. Gibbs, Bartha Maria Knoppers, Eric S. Lander, Hans Lehrach, Elaine R. Mardis, Gil McVean, Debbie A. Nickerson, Leena Peltonen, Alan J. Schafer, Stephen T. Sherry, Jun Wang, Richard K. Wilson, David Rio Deiros, Mike Metzker, Donna M. Muzny, Jeff Reid, David A. Wheeler, Jingxiang Li, Min Jian, Guoqing Li, Ruiqiang Li, Huiqing Liang, Geng Tian, Bo Wang, Jian Wang, Wei Wang, Huanming Yang, Xiuqing Zhang, Huisong Zheng, Lauren Ambrogio, Toby Bloom, Kristian Cibulskis, Tim Fennell, David B. Jaffe, Erica Shefler, Carrie Sougnez, Niall Gormley, Sean Humphray, Zoya Kingsbury, Paula Koko-Gonzales, Jennifer Stone, Kevin McKernan, Gina L. Costa, Jeffry K. Ichikawa, Clarence Lee, Ralf Sudbrak, Tatiana Borodina, Andreas Dahl, Alexey N. Davydov, P Marquardt, Florian Mertes, Wilfiried Nietfeld, Philip Rosenstiel, Stefan Schreiber, Aleksey V. Soldatov, Bernd Timmermann, Marius Tolzmann, Jason P. Affourtit, Dana Ashworth, Said Attiya, Melissa Bachorski, Eli Buglione, Adam Burke, Amanda Caprio, Christopher Celone, Andrew G. Clark, David Conners, Brian Desany, Lisa Gu, Lorri Guccione, Kalvin Kao, Andrew Kebbel, Jennifer Knowlton, Matthew T. Labrecque, Louise McDade, Craig Mealmaker, Melissa Minderman, Anne Nawrocki, Faheem Niazi, Kristen Pareja, Ravi Ramenani, David W. H. Riches, Wanmin Song, Cynthia Turcotte, Shally Wang, David J. Dooling, Lucinda Fulton, Robert S. Fulton and 262 more - Nature 2010 cited by 8,121
- New insights into the Tyrolean Iceman's origin and phenotype as inferred by whole-genome sequencing
Authors: Andreas Keller, Angela Graefen, Markus Ball, Mark Matzas, Valesca Boisguérin, Frank Maixner, Petra Leidinger, Christina Backes, Rabab Khairat, Michael Förster, Björn Stade, André Franke, Jens Mayer, Jessica Spangler, Stephen McLaughlin, Minita Shah, Clarence Lee, Timothy T. Harkins, Alexander Sartori, Andrés Moreno‐Estrada, Brenna M. Henn, Martin Sikora, Ornella Semino, Jacques Chiaroni, Siiri Rootsi, Natalie M. Myres, Vicente M. Cabrera, Peter A. Underhill, Carlos D. Bustamante, Eduard Egarter Vigl, Marco Samadelli, Giovanna Cipollini, Jan Haas, Hugo A. Katus, Brian D. O’Connor, Marc Carlson, Benjamin Meder, Nikolaus Blin, Eckart Meese, Carsten M. Pusch, Albert Zink - Nature Communications 2012 cited by 462
- Demographically-Based Evaluation of Genomic Regions under Selection in Domestic Dogs
Authors: Adam H. Freedman, Rena M. Schweizer, Diego Ortega‐Del Vecchyo, Eunjung Han, Brian W. Davis, Ilan Gronau, Pedro Silva, Marco Galaverni, Zhenxin Fan, Péter Marx, Belén Lorente-Galdós, Óscar Ramírez, Farhad Hormozdiari, Can Alkan, Carles Vilà, Kevin Squire, Eli Geffen, Josip Kusak, Adam R. Boyko, Heidi G. Parker, Clarence Lee, Vasisht Tadigotla, Adam Siepel, Carlos D. Bustamante, Timothy T. Harkins, Stanley F. Nelson, Tomàs Marquès‐Bonet, Elaine A. Ostrander, Robert K. Wayne, John Novembre - PLoS Genetics 2016 cited by 114
- Personal and Social Usage: The Origins of Active Customers and Ways to Keep Them Engaged
Authors: Clarence Lee, Elie Ofek, Thomas J. Steenburgh - Management Science, Manag. Sci. 2017 cited by 39
