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Mats Nilsson

Active 1989–2026

135
Papers
18,909
Citations
75
h-index
116
i10-index

Citations

Citations per year for Mats Nilsson1978: 1 citations1989: 1 citations1990: 1 citations1991: 2 citations1992: 1 citations1993: 3 citations1994: 1 citations1995: 7 citations1996: 6 citations1997: 9 citations1998: 14 citations1999: 42 citations2000: 64 citations2001: 104 citations2002: 99 citations2003: 61 citations2004: 81 citations2005: 87 citations2006: 90 citations2007: 79 citations2008: 106 citations2009: 92 citations2010: 76 citations2011: 92 citations2012: 96 citations2013: 104 citations2014: 134 citations2015: 104 citations2016: 115 citations2017: 114 citations2018: 161 citations2019: 362 citations2020: 600 citations2021: 712 citations2022: 710 citations2023: 624 citations2024: 1,007 citations2025: 585 citations2026: 31 citations1979–1988: no citations, so these years are not shown

Citation sources

Countries

World map of the countries and regions citing this authorUnited States: 2,042 citing papers, 23.5% of this breakdownChina: 1,089 citing papers, 12.5% of this breakdownUnited Kingdom: 620 citing papers, 7.1% of this breakdownSweden: 612 citing papers, 7% of this breakdownGermany: 559 citing papers, 6.4% of this breakdownCanada: 301 citing papers, 3.5% of this breakdownFrance: 252 citing papers, 2.9% of this breakdownNetherlands: 233 citing papers, 2.7% of this breakdownAustralia: 228 citing papers, 2.6% of this breakdownItaly: 224 citing papers, 2.6% of this breakdownSwitzerland: 202 citing papers, 2.3% of this breakdownSpain: 183 citing papers, 2.1% of this breakdown
0%23.5%Other 24.8%

Institutions

Fields

  • Biochemistry, Genetics and Molecular Biology48.9%
  • Medicine17.4%
  • Environmental Science8.9%
  • Engineering5.7%
  • Computer Science4.8%
  • Neuroscience3.9%
  • Other10.4%

Topics

  • Single-cell and spatial transcriptomics7.8%
  • Advanced biosensing and bioanalysis techniques4.3%
  • Biosensors and Analytical Detection2.9%
  • Remote Sensing and LiDAR Applications2.6%
  • Cancer Genomics and Diagnostics2.1%
  • Cell Image Analysis Techniques2%
  • Other78.3%

Coauthors

All papers

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  1. In situ sequencing for RNA analysis in preserved tissue and cells

    Authors: Rongqin Ke, Marco Mignardi, Alexandra Pacureanu, Jessica Svedlund, Johan Botling, Carolina Wählby, Mats Nilsson - Nature Methods 2013 cited by 986

  2. A Spatiotemporal Organ-Wide Gene Expression and Cell Atlas of the Developing Human Heart

    Authors: Michaela Asp, Stefania Giacomello, Ludvig Larsson, Chenglin Wu, Daniel Fürth, Xiaoyan Qian, Eva Wärdell, Joaquín Custodio, Johan Reimegård, Fredrik Salmén, Cecilia Österholm, Patrik L. Ståhl, Erik Sundström, Elisabet Åkesson, Olaf Bergmann, Magda Bienko, Agneta Månsson‐Broberg, Mats Nilsson, Christer Sylvén, Joakim Lundeberg - Cell 2019 cited by 846

  3. Molecular architecture of the developing mouse brain

    Authors: Gioele La Manno, Kimberly Siletti, Alessandro Furlan, Daniel Gyllborg, Elin Vinsland, Alejandro Mossi Albiach, Christoffer Mattsson Langseth, Irina Khven, Alex R. Lederer, Lisa M. Dratva, Anna Johnsson, Mats Nilsson, Peter Lönnerberg, Sten Linnarsson - Nature 2021 cited by 610

  4. Hybridization-based in situ sequencing (HybISS) for spatially resolved transcriptomics in human and mouse brain tissue

    Authors: Daniel Gyllborg, Christoffer Mattsson Langseth, Xiaoyan Qian, Eun‐Kyoung Choi, Sergio Marco Salas, Markus M. Hilscher, Ed S. Lein, Mats Nilsson - Nucleic Acids Research 2020 cited by 316

  5. Spatial multimodal analysis of transcriptomes and metabolomes in tissues

    Authors: Marco Vicari, Reza Mirzazadeh, Anna Nilsson, Mohammadreza Shariatgorji, Patrik Bjärterot, Ludvig Larsson, Hower Lee, Mats Nilsson, Julia Foyer, Markus Ekvall, Paulo Czarnewski, Xiaoqun Zhang, Per Svenningsson, Lukas Käll, Per E. Andrén, Joakim Lundeberg - Nature Biotechnology 2023 cited by 146

  6. Spatiotemporal structure of cell fate decisions in murine neural crest

    Authors: Ruslan Soldatov, Markéta Kaucká, Maria Eleni Kastriti, Julian Petersen, Tatiana Chontorotzea, Lukas Englmaier, Natalia Akkuratova, Yunshi Yang, Martin Häring, Vyacheslav Dyachuk, Christoph Bock, Matthias Farlik, Michael L. Piacentino, Franck Boismoreau, Markus M. Hilscher, Chika Yokota, Xiaoyan Qian, Mats Nilsson, Marianne Bronner‐Fraser, Laura Croci, Wen-Yu Hsiao, David A. Guertin, Jean‐François Brunet, G. Giacomo Consalez, Patrik Ernfors, Kaj Fried, Peter V. Kharchenko, Igor Adameyko - Science 2019 cited by 573

  7. Profiling surface proteins on individual exosomes using a proximity barcoding assay

    Authors: Di Wu, Junhong Yan, Xia Shen, Yu Sun, Måns Thulin, Yanling Cai, Lotta Wik, Qiujin Shen, Johan Oelrich, Xiaoyan Qian, Kévin Dubois, G. Ronquist, Mats Nilsson, Ulf Landegren, Masood Kamali‐Moghaddam - Nature Communications 2019 cited by 275

  8. The landscape of tumor cell states and spatial organization in H3-K27M mutant diffuse midline glioma across age and location

    Authors: Ilon Liu, Li Jiang, Erik Samuelsson, Sergio Marco Salas, Alexander Beck, Olivia A. Hack, Da-Eun Jeong, McKenzie Shaw, Bernhard Englinger, Jenna LaBelle, Hafsa M. Mire, Sibylle Madlener, Lisa Mayr, Michael A. Quezada, Maria Trissal, Eshini Panditharatna, Kati Ernst, Jayne Vogelzang, Taylor Gatesman, Matthew Halbert, Hana Pálová, Petra Pokorná, Jaroslav Štěrba, Ondřej Slabý, René Geyeregger, Aarón Díaz, Izac J. Findlay, Matthew D. Dun, Adam Resnick, Mario L. Suvà, David Jones, Sameer Agnihotri, Jessica Svedlund, Carl Koschmann, Christine Haberler, Thomas Czech, Irene Slavc, Jennifer Cotter, Keith L. Ligon, Sanda Alexandrescu, W.K. Alfred Yung, Isabel Arrillaga‐Romany, Johannes Gojo, Michelle Monje, Mats Nilsson, Mariella G. Filbin - Nature Genetics 2022 cited by 193

  9. Spatial genomics maps the structure, nature and evolution of cancer clones

    Authors: Artem Lomakin, Jessica Svedlund, Carina Strell, Milana Gatarić, Artem Shmatko, Gleb D. Rukhovich, Jun Sung Park, Young Seok Ju, Stefan C. Dentro, Vitalii Kleshchevnikov, Vasyl Vaskivskyi, Tong Li, Omer Ali Bayraktar, Sarah E. Pinder, Andrea L. Richardson, Sandro Santagata, Peter J. Campbell, Hege G. Russnes, Moritz Gerstung, Mats Nilsson, Lucy Yates - Nature 2022 cited by 176

  10. Harmonized single-cell landscape, intercellular crosstalk and tumor architecture of glioblastoma

    Authors: Cristian Ruiz-Moreno, Sergio Marco Salas, Erik Samuelsson, Sebastian Brandner, Mariëtte E.G. Kranendonk, Mats Nilsson, Hendrik G. Stunnenberg - 2022 cited by 114

  11. Probabilistic cell typing enables fine mapping of closely related cell types in situ

    Authors: Xiaoyan Qian, Kenneth D. Harris, Thomas Hauling, Dimitris Nicoloutsopoulos, Ana B. Muñoz‐Manchado, Nathan Skene, Jens Hjerling‐Leffler, Mats Nilsson - Nature Methods 2019 cited by 283

  12. Single-cell RNA sequencing reveals midbrain dopamine neuron diversity emerging during mouse brain development

    Authors: Katarína Tiklová, Åsa K. Björklund, Laura Lahti, Alessandro Fiorenzano, Sara Nolbrant, Linda Gillberg, Nikolaos Volakakis, Chika Yokota, Markus M. Hilscher, Thomas Hauling, F Ross Holmstrom, Eliza Joodmardi, Mats Nilsson, Malin Parmar, Thomas Perlmann - Nature Communications 2019 cited by 288

  13. A roadmap for the Human Developmental Cell Atlas

    Authors: Muzlifah Haniffa, Deanne Taylor, Sten Linnarsson, Bruce J. Aronow, Gary D. Bader, Roger A. Barker, Pablo G. Cámara, J. Gray Camp, Alain Chédotal, Andrew J. Copp, Heather Etchevers, Paolo Giacobini, Berthold Göttgens, Guoji Guo, Ania Hupalowska, Kylie R. James, Emily Kirby, Arnold R. Kriegstein, Joakim Lundeberg, John C. Marioni, Kerstin B. Meyer, Kathy K. Niakan, Mats Nilsson, Bayanne Olabi, Dana Pe’er, Aviv Regev, Jennifer Rood, Orit Rozenblatt–Rosen, Rahul Satija, Sarah A. Teichmann, Barbara Treutlein, Roser Vento‐Tormo, Simone Webb, Human Cell Atlas Developmental Biological Network, Pascal Barbry, Omer Ali Bayraktar, Sam Behjati, Andreas Bosio, Bruno Canque, Frédéric Chalmel, Yorick Gitton, Deborah J. Henderson, Anne Jørgensen, Steven Lisgo, Jinyue Liu, Emma Lundberg, Jean‐Léon Maître, Séverine Mazaud‐Guittot, Elizabeth Robertson, Antoine D. Rolland, Raphaël Scharfmann, Michèle Souyri, Erik Sundström, Stéphane Zaffran, Matthias Zilbauer - Nature 2021 cited by 191

  14. Cellular architecture of evolving neuroinflammatory lesions and multiple sclerosis pathology

    Authors: Petra Kukanja, Christoffer Mattsson Langseth, Leslie A. Kirby, Eneritz Agirre, Chao Zheng, Amitha Raman, Chika Yokota, Christophe Avenel, Katarína Tiklová, André Ortlieb Guerreiro‐Cacais, Tomas Olsson, Markus M. Hilscher, Mats Nilsson, Gonçalo Castelo‐Branco - Cell 2024 cited by 115

  15. Distinct oligodendrocyte populations have spatial preference and different responses to spinal cord injury

    Authors: Elisa M. Floriddia, Tânia Lourenço, Shupei Zhang, David van Bruggen, Markus M. Hilscher, Petra Kukanja, João P. Gonçalves dos Santos, Müge Altınkök, Chika Yokota, Enric Llorens-Bobadilla, Sara B. Mulinyawe, Mário Grãos, Lu Sun, Jonas Frisén, Mats Nilsson, Gonçalo Castelo‐Branco - Nature Communications 2020 cited by 173

  16. Optimizing Xenium In Situ data utility by quality assessment and best practice analysis workflows

    Authors: Sergio Marco Salas, Paulo Czarnewski, Louis B. Kuemmerle, Saga Helgadóttir, Christoffer Mattsson Langseth, Sebastian Tismeyer, Christophe Avenel, Habib Rehman, Katarína Tiklová, Axel Andersson, Maria Chatzinikolaou, Fabian J. Theis, Malte D. Luecken, Carolina Wählby, Naveed Ishaque, Mats Nilsson - 2023 cited by 67

  17. Optimizing Xenium In Situ data utility by quality assessment and best-practice analysis workflows

    Authors: Sergio Marco Salas, Louis B. Kuemmerle, Christoffer Mattsson-Langseth, Sebastian Tismeyer, Christophe Avenel, Taobo Hu, Habib Rehman, Marco Grillo, Paulo Czarnewski, Saga Helgadóttir, Katarína Tiklová, Axel Andersson, Nima Rafati, Maria Chatzinikolaou, Fabian J. Theis, Malte D. Luecken, Carolina Wählby, Naveed Ishaque, Mats Nilsson - Nature Methods 2025 cited by 93

  18. Molecular dissection of colorectal cancer in pre-clinical models identifies biomarkers predicting sensitivity to EGFR inhibitors

    Authors: Moritz Schütte, Thomas S. Risch, Nilofar Abdavi-Azar, Karsten Boehnke, Dirk Schumacher, Marlen Keil, Reha Yildiriman, Christine Jandrasits, Tatiana Borodina, Vyacheslav Amstislavskiy, Catherine L. Worth, Caroline Schweiger, Sandra Liebs, Martin Lange, Hans-Jörg Warnatz, Lee M Butcher, James E. Barrett, Marc Sultan, Christoph Wierling, Nicole Golob‐Schwarzl, Sigurd Lax, Stefan Uranitsch, Michael W. Becker, Yvonne Welte, Joseph L. Regan, Maxine Silvestrov, Inge Kehler, Alberto Fusi, T. Keßler, Ralf Herwig, Ulf Landegren, Dirk Wienke, Mats Nilsson, Juan A. Velasco, Pilar Garin‐Chesa, Christoph Reinhard, Stephan Beck, Reinhold Schäfer, Christian Regenbrecht, David Henderson, Bodo Lange, Johannes Haybaeck, Ulrich Keilholz, Jens Hoffmann, Hans Lehrach, Marie‐Laure Yaspo - Nature Communications 2017 cited by 349

  19. Impact of Epithelial–Stromal Interactions on Peritumoral Fibroblasts in Ductal Carcinoma in Situ

    Authors: Carina Strell, Janna Paulsson, Shao-Bo Jin, Nicholas P. Tobin, Artur Mezheyeuski, Pernilla Roswall, Ceren Mutgan, Nicholas Mitsios, Hemming Johansson, Sarah Marie Wickberg, Jessica Svedlund, Mats Nilsson, Per Hall, Jan Mulder, Derek C. Radisky, Kristian Pietras, Jonas Bergh, Urban Lendahl, Fredrik Wärnberg, Arne Östman - JNCI Journal of the National Cancer Institute 2018 cited by 152

  20. Padlock Probes: Circularizing Oligonucleotides for Localized DNA Detection

    Authors: Mats Nilsson, Helena Malmgren, Martina Samiotaki, Marek Kwiatkowski, Bhanu P. Chowdhary, Ulf Landegren - Science 1994 cited by 797

  21. In situ detection and genotyping of individual mRNA molecules

    Authors: Chatarina Larsson, Ida Grundberg, Ola Söderberg, Mats Nilsson - Nature Methods 2010 cited by 423

  22. A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung

    Authors: Alexandros Sountoulidis, Sergio Marco Salas, Emelie Braun, Christophe Avenel, Joseph Bergenstråhle, Jonas Theelke, Marco Vicari, Paulo Czarnewski, Andreas Liontos, Xesús M. Abalo, Žaneta Andrusivová, Reza Mirzazadeh, Michaela Asp, Xiaofei Li, Lijuan Hu, Sanem Sarıyar, Anna Martinez Casals, Burcu Ayoglu, Alexandra B. Firsova, Jakob Michaëlsson, Emma Lundberg, Carolina Wählby, Erik Sundström, Sten Linnarsson, Joakim Lundeberg, Mats Nilsson, Christos Samakovlis - Nature Cell Biology 2023 cited by 63

  23. Direct RNA targeted in situ sequencing for transcriptomic profiling in tissue

    Authors: Hower Lee, Sergio Marco Salas, Daniel Gyllborg, Mats Nilsson - Scientific Reports 2022 cited by 60

  24. Spatial and temporal localization of immune transcripts defines hallmarks and diversity in the tuberculosis granuloma

    Authors: Berit Carow, Thomas Hauling, Xiaoyan Qian, Igor Kramnik, Mats Nilsson, Martı́n E. Rottenberg - Nature Communications 2019 cited by 106