S.K. Burley
Active 1985–2026
- 172
- Papers
- 40,718
- Citations
- 100
- h-index
- 163
- i10-index
Citations
Citation sources
Countries
Institutions
Fields
- Biochemistry, Genetics and Molecular Biology54.8%
- Medicine16.2%
- Neuroscience10.3%
- Computer Science5%
- Materials Science3.6%
- Chemistry2.8%
- Other7.3%
Topics
- RNA and protein synthesis mechanisms5.3%
- Protein Structure and Dynamics4.4%
- RNA Research and Splicing3.6%
- Regulation of Appetite and Obesity3.5%
- Enzyme Structure and Function3%
- Computational Drug Discovery Methods3%
- Other77.2%
Coauthors
- Helen M. Berman19
- John Westbrook18
- Andrej Šali17
- David S. Goodsell16
- Christine Zardecki15
- Brian P. Hudson14
- Brinda Vallat14
- Sameer Velankar14
- Chenghua Shao13
- Ezra Peisach13
- J.B. Bonanno13
- Jasmine Young13
- José M. Duarte13
- Zukang Feng13
- Catherine L. Lawson12
- Genji Kurisu12
- Shuchismita Dutta12
- Maria Voigt11
- Nahum Sonenberg10
- Sebastian Bittrich10
- Jeffrey C. Hoch9
- Monica Sekharan9
- Chunxiao Bi8
- Dennis W. Piehl8
All papers
- Protein Data Bank: the single global archive for 3D macromolecular structure data
Authors: S.K. Burley, Helen M. Berman, Charmi Bhikadiya, Chunxiao Bi, Li Chen, Luigi Di Costanzo, Cole Christie, José M. Duarte, Shuchismita Dutta, Zukang Feng, Sutapa Ghosh, David S. Goodsell, Rachel Kramer Green, Vladimir Guranović, Dmytro Guzenko, Brian P. Hudson, Yu‐He Liang, Robert Lowe, Ezra Peisach, Irina Periskova, Chris Randle, Alexander Rose, Monica Sekharan, Chenghua Shao, Yi‐Ping Tao, Yana Valasatava, Maria Voigt, John Westbrook, Jasmine Young, Christine Zardecki, Marina A. Zhuravleva, Genji Kurisu, Haruki Nakamura, Yumiko Kengaku, Hasumi Cho, Sato Junko, Ju Yaen Kim, Yasuyo Ikegawa, Atsushi Nakagawa, Reiko Yamashita, Takahiro KUDOU, Gert‐Jan Bekker, Hirofumi Suzuki, Takeshi Iwata, Masashi Yokochi, Naohiro Kobayashi, Toshimichi Fujiwara, Sameer Velankar, Gerard J. Kleywegt, Stephen Anyango, David Armstrong, John M. Berrisford, M.J. Conroy, Jose M Dana, Mandar Deshpande, Paul J. Gane, Romana Gáborová, Deepti Gupta, Aleksandras Gutmanas, Jaroslav Koča, Lora Mak, Saqib Mir, Abhik Mukhopadhyay, Nurul Nadzirin, Sreenath Nair, Ardan Patwardhan, Typhaine Paysan‐Lafosse, Lukáš Pravda, Osman Salih, David Sehnal, Mihály Váradi, Radka Svobodová Vařeková, John L. Markley, Jeffrey C. Hoch, Pedro Romero, Kumaran Baskaran, Dimitri Maziuk, Eldon L. Ulrich, Jonathan R. Wedell, Hongyang Yao, Miron Livny, Yannis Ioannidis - Nucleic Acids Research, Nucleic Acids Res. 2018 cited by 1,204
- Protein Data Bank (PDB): The Single Global Macromolecular Structure Archive
Authors: S.K. Burley, Helen M. Berman, Gerard J. Kleywegt, John L. Markley, Haruki Nakamura, Sameer Velankar - Methods in molecular biology 2017 cited by 1,199
- Recon3D enables a three-dimensional view of gene variation in human metabolism
Authors: Elizabeth Brunk, Swagatika Sahoo, Daniel C. Zielinski, Ali Altunkaya, Andreas Dräger, Nathan Mih, Francesco Gatto, Avlant Nilsson, German Preciat, Maike K. Aurich, Andreas Prlić, Anand V. Sastry, Anna Dröfn Daníelsdóttir, Almut Heinken, Alberto Noronha, Peter W. Rose, S.K. Burley, Ronan M. T. Fleming, Jens Nielsen, Ines Thiele, Bernhard Ø. Palsson - Nature Biotechnology 2018 cited by 823
- EMDB—the Electron Microscopy Data Bank
Authors: Jack Turner, Sanja Abbott, Neli Fonseca, Ryan Pye, Lucas Carrijo, Amudha Kumari Duraisamy, Osman Salih, Zhe Wang, Gerard J. Kleywegt, Kyle L. Morris, Ardan Patwardhan, S.K. Burley, G.V. Crichlow, Zukang Feng, Justin W. Flatt, Sutapa Ghosh, Brian P. Hudson, Catherine L. Lawson, Yu‐He Liang, Ezra Peisach, Irina Persikova, Monica Sekharan, Chenghua Shao, Jasmine Young, Sameer Velankar, David Armstrong, Marcus Bage, Wesley Morellato Bueno, Genevieve L. Evans, Romana Gáborová, Sudakshina Ganguly, Deepti Gupta, Déborah Harrus, Ahsan Tanweer, Manju Bansal, Vetriselvi Rangannan, Genji Kurisu, Hasumi Cho, Yasuyo Ikegawa, Yumiko Kengaku, Ju Yaen Kim, Satomi Niwa, Sato Junko, Ayako Takuwa, Jian Yu, Jeffrey C. Hoch, Kumaran Baskaran, Wenqing Xu, Weizhe Zhang, Xiaodan Ma - Nucleic Acids Research 2023 cited by 144
- RCSB Protein Data Bank: Architectural Advances Towards Integrated Searching and Efficient Access to Macromolecular Structure Data from the PDB Archive
Authors: Yana Rose, José M. Duarte, Robert Lowe, Joan Segura, Chunxiao Bi, Charmi Bhikadiya, Li Chen, Alexander Rose, Sebastian Bittrich, S.K. Burley, John Westbrook - Journal of Molecular Biology 2020 cited by 248
- Updated resources for exploring experimentally-determined PDB structures and Computed Structure Models at the RCSB Protein Data Bank
Authors: S.K. Burley, Rusham Bhatt, Charmi Bhikadiya, Chunxiao Bi, Alison Biester, Pratyoy Biswas, Sebastian Bittrich, Santiago Blaumann, Ronald Brown, Henry Chao, Vivek Reddy Chithari, P. Craig, G.V. Crichlow, José M. Duarte, Shuchismita Dutta, Zukang Feng, Justin W. Flatt, Sutapa Ghosh, David S. Goodsell, Rachel Kramer Green, Vladimir Guranović, Jeremy Henry, Brian P. Hudson, Mariya Joy, Jason T. Kaelber, Igor Khokhriakov, Jhih‐Siang Lai, Catherine L. Lawson, Yu‐He Liang, Douglas Myers-Turnbull, Ezra Peisach, Irina Persikova, Dennis W. Piehl, Aditya Pingale, Yana Rose, Jared M. Sagendorf, Andrej Šali, Joan Segura, Monica Sekharan, Chenghua Shao, James M. Smith, Michael Trumbull, Brinda Vallat, Maria Voigt, Ben Webb, Shamara Whetstone, Amy Wu-Wu, Tongji Xing, Jasmine Young, Arthur O. Zalevsky, Christine Zardecki - Nucleic Acids Research 2024 cited by 257
- RCSB Protein Data Bank: Enabling biomedical research and drug discovery
Authors: David S. Goodsell, Christine Zardecki, Luigi Di Costanzo, José M. Duarte, Brian P. Hudson, Irina Persikova, Joan Segura, Chenghua Shao, Maria Voigt, John Westbrook, Jasmine Young, S.K. Burley - Protein Science 2019 cited by 363
- RCSB Protein Data Bank: Celebrating 50 years of the PDB with new tools for understanding and visualizing biological macromolecules in 3D
Authors: S.K. Burley, Charmi Bhikadiya, Chunxiao Bi, Sebastian Bittrich, Li Chen, G.V. Crichlow, José M. Duarte, Shuchismita Dutta, Maryam Fayazi, Zukang Feng, Justin W. Flatt, Sai J. Ganesan, David S. Goodsell, Sutapa Ghosh, Rachel Kramer Green, Vladimir Guranović, Jeremy Henry, Brian P. Hudson, Catherine L. Lawson, Yu‐He Liang, Robert Lowe, Ezra Peisach, Irina Persikova, Dennis W. Piehl, Yana Rose, Andrej Šali, Joan Segura, Monica Sekharan, Chenghua Shao, Brinda Vallat, Maria Voigt, John Westbrook, Shamara Whetstone, Jasmine Young, Christine Zardecki - Protein Science 2021 cited by 196
- Weight-Reducing Effects of the Plasma Protein Encoded by the obese Gene
Authors: Jeffrey L. Halaas, K.S. Gajiwala, Margherita Maffei, Steven L. Cohen, Brian T. Chait, Daniel Rabinowitz, Roger L. Lallone, S.K. Burley, Jeffrey M. Friedman - Science 1995 cited by 4,459
- X-Ray Structures of Myc-Max and Mad-Max Recognizing DNA
Authors: Satish K. Nair, S.K. Burley - Cell 2003 cited by 555
- Aromatic-Aromatic Interaction: A Mechanism of Protein Structure Stabilization
Authors: S.K. Burley, Gregory A. Petsko - Science 1985 cited by 2,535
- Type VI secretion apparatus and phage tail-associated protein complexes share a common evolutionary origin
Authors: P.G. Leiman, Marek Basler, U.A. Ramagopal, J.B. Bonanno, J.M. Sauder, Stefan Pukatzki, S.K. Burley, Steven C. Almo, John J. Mekalanos - National Academy of Sciences, Proceedings of the National Academy of Sciences 2009 cited by 642
- Protein Data Bank: A Comprehensive Review of 3D Structure Holdings and Worldwide Utilization by Researchers, Educators, and Students
Authors: S.K. Burley, Helen M. Berman, José M. Duarte, Zukang Feng, Justin W. Flatt, Brian P. Hudson, Robert Lowe, Ezra Peisach, Dennis W. Piehl, Yana Rose, Andrej Šali, Monica Sekharan, Chenghua Shao, Brinda Vallat, Maria Voigt, John Westbrook, Jasmine Young, Christine Zardecki - Biomolecules 2022 cited by 130
- PDB‐101: Educational resources supporting molecular explorations through biology and medicine
Authors: Christine Zardecki, Shuchismita Dutta, David S. Goodsell, Robert Lowe, Maria Voigt, S.K. Burley - Protein Science 2021 cited by 119
- PDBx/mmCIF Ecosystem: Foundational Semantic Tools for Structural Biology
Authors: John Westbrook, Jasmine Young, Chenghua Shao, Zukang Feng, Vladimir Guranović, Catherine L. Lawson, Brinda Vallat, Paul D. Adams, John M. Berrisford, G. Bricogne, Kay Diederichs, Robbie P. Joosten, Peter M. Keller, Nigel W. Moriarty, Oleg V. Sobolev, Sameer Velankar, Clemens Vonrhein, David G. Waterman, Genji Kurisu, Helen M. Berman, S.K. Burley, Ezra Peisach - Journal of Molecular Biology 2022 cited by 93
- RCSB Protein Data Bank: Sustaining a living digital data resource that enables breakthroughs in scientific research and biomedical education
Authors: S.K. Burley, Helen M. Berman, Cole Christie, José M. Duarte, Zukang Feng, John Westbrook, Jasmine Young, Christine Zardecki - Protein Science 2017 cited by 301
- Validation of Structures in the Protein Data Bank
Authors: Swanand Gore, Eduardo Sanz‐García, P. Hendrickx, Aleksandras Gutmanas, John Westbrook, Huanwang Yang, Zukang Feng, Kumaran Baskaran, John M. Berrisford, Brian P. Hudson, Yasuyo Ikegawa, Naohiro Kobayashi, Catherine L. Lawson, Steve Mading, Lora Mak, Abhik Mukhopadhyay, Thomas J. Oldfield, Ardan Patwardhan, Ezra Peisach, Gaurav Sahni, Monica Sekharan, Sanchayita Sen, Chenghua Shao, Oliver S. Smart, Eldon L. Ulrich, Reiko Yamashita, Martha Quesada, Jasmine Young, Haruki Nakamura, John L. Markley, Helen M. Berman, S.K. Burley, Sameer Velankar, Gerard J. Kleywegt - Structure 2017 cited by 296
- RCSB Protein Data Bank: Efficient Searching and Simultaneous Access to One Million Computed Structure Models Alongside the PDB Structures Enabled by Architectural Advances
Authors: Sebastian Bittrich, Charmi Bhikadiya, Chunxiao Bi, Henry Chao, José M. Duarte, Shuchismita Dutta, Maryam Fayazi, Jeremy Henry, Igor Khokhriakov, Robert Lowe, Dennis W. Piehl, Joan Segura, Brinda Vallat, Maria Voigt, John Westbrook, S.K. Burley, Yana Rose - Journal of Molecular Biology 2023 cited by 78
- RCSB Protein Data bank: Tools for visualizing and understanding biological macromolecules in 3D
Authors: S.K. Burley, Charmi Bhikadiya, Chunxiao Bi, Sebastian Bittrich, Henry Chao, Li Chen, P. Craig, G.V. Crichlow, Kenneth Dalenberg, José M. Duarte, Shuchismita Dutta, Maryam Fayazi, Zukang Feng, Justin W. Flatt, Sai J. Ganesan, Sutapa Ghosh, David S. Goodsell, Rachel Kramer Green, Vladimir Guranović, Jeremy Henry, Brian P. Hudson, Igor Khokhriakov, Catherine L. Lawson, Yu‐He Liang, Robert Lowe, Ezra Peisach, Irina Persikova, Dennis W. Piehl, Yana Rose, Andrej Šali, Joan Segura, Monica Sekharan, Chenghua Shao, Brinda Vallat, Maria Voigt, Benjamin Webb, John Westbrook, Shamara Whetstone, Jasmine Y. Young, Arthur O. Zalevsky, Christine Zardecki - Protein Science 2022 cited by 102
- D3R Grand Challenge 2: blind prediction of protein-ligand poses, affinity rankings, and relative binding free energies
Authors: Zied Gaieb, Shuai Liu, Symon Gathiaka, Michael Chiu, Huanwang Yang, Chenghua Shao, Victoria A. Feher, W. Patrick Walters, Bernd Kuhn, M.G. Rudolph, S.K. Burley, Michael K. Gilson, Rommie E. Amaro - Journal of Computer-Aided Molecular Design, J. Comput. Aided Mol. Des. 2017 cited by 202
- RCSB Protein Data Bank: A Resource for Chemical, Biochemical, and Structural Explorations of Large and Small Biomolecules
Authors: Christine Zardecki, Shuchismita Dutta, David S. Goodsell, Maria Voigt, S.K. Burley - Journal of Chemical Education 2016 cited by 158
- mTOR regulates aerobic glycolysis through NEAT1 and nuclear paraspeckle-mediated mechanism in hepatocellular carcinoma
Authors: Hong Zhang, Xiaoyang Su, S.K. Burley, Xi Zheng - Theranostics 2022 cited by 75
- D3R grand challenge 2015: Evaluation of protein-ligand pose and affinity predictions
Authors: Symon Gathiaka, Shuai Liu, Michael Chiu, Huanwang Yang, Jeanne A. Stuckey, You Na Kang, Jim Delproposto, Ginger Kubish, James B. Dunbar, Heather A. Carlson, S.K. Burley, W. Patrick Walters, Rommie E. Amaro, Victoria A. Feher, Michael K. Gilson - Journal of Computer-Aided Molecular Design, J. Comput. Aided Mol. Des. 2016 cited by 227
- The Protein Data Bank Archive
Authors: Sameer Velankar, S.K. Burley, Genji Kurisu, Jeffrey C. Hoch, John L. Markley - Methods in molecular biology 2021 cited by 111
