John J. Irwin
1992–2026 年に発表
- 86
- 論文数
- 28,540
- 被引用数
- 56
- h 指数
- 78
- i10 指数
被引用数
引用元
国・地域
機関
分野
- Computer Science53.2%
- Biochemistry, Genetics and Molecular Biology21%
- Medicine12.1%
- Materials Science3.5%
- Chemistry2.4%
- Neuroscience1.4%
- その他6.4%
トピック
- Computational Drug Discovery Methods22.2%
- Protein Structure and Dynamics6.3%
- Machine Learning in Materials Science5.2%
- Bioinformatics and Genomic Networks3.2%
- Microbial Natural Products and Biosynthesis2.7%
- Receptor Mechanisms and Signaling2.5%
- その他57.9%
共著者
- Brian K. Shoichet57
- Yurii S. Moroz17
- Bryan L. Roth14
- Jiankun Lyu9
- Kristina Edfeldt8
- Michael J. Keiser8
- Stefan Gahbauer8
- A.M. Edwards7
- Irene Chau7
- Isabella Glenn7
- Xi‐Ping Huang7
- Albina Bolotokova6
- Allan I. Basbaum6
- Elissa A. Fink6
- Hartmut Beck6
- Katrin Denzinger6
- Tia A. Tummino6
- Andrej Šali5
- C.H. Arrowsmith5
- Emanuele Carosati5
- Hao Fan5
- Ian Dunn5
- Jens Carlsson5
- Suzanne Ackloo5
全論文
- ZINC 15 - Ligand Discovery for Everyone
著者: Teague Sterling, John J. Irwin - Journal of Chemical Information and Modeling, J. Chem. Inf. Model. 2015 被引用: 3,380
- Directory of Useful Decoys, Enhanced (DUD-E): Better Ligands and Decoys for Better Benchmarking
著者: Michael M. Mysinger, Michael Carchia, John J. Irwin, Brian K. Shoichet - Journal of Medicinal Chemistry 2012 被引用: 2,405
- ZINC20 - A Free Ultralarge-Scale Chemical Database for Ligand Discovery
著者: John J. Irwin, Khanh G. Tang, Jennifer Young, Chinzorig Dandarchuluun, Benjamin R. Wong, Munkhzul Khurelbaatar, Yurii S. Moroz, John W. Mayfield, Roger A. Sayle - Journal of Chemical Information and Modeling, J. Chem. Inf. Model. 2020 被引用: 1,008
- ZINC - A Free Database of Commercially Available Compounds for Virtual Screening
著者: John J. Irwin, Brian K. Shoichet - ChemInform, J. Chem. Inf. Model. 2004 被引用: 4,072
- ZINC: A Free Tool to Discover Chemistry for Biology
著者: John J. Irwin, Teague Sterling, Michael M. Mysinger, Erin S. Bolstad, Ryan G. Coleman - Journal of Chemical Information and Modeling, J. Chem. Inf. Model. 2012 被引用: 2,562
- Relating protein pharmacology by ligand chemistry
著者: Michael J. Keiser, Bryan L. Roth, Blaine N. Armbruster, Paul Ernsberger, John J. Irwin, Brian K. Shoichet - Nature Biotechnology 2007 被引用: 2,400
- A practical guide to large-scale docking
著者: Brian J. Bender, Stefan Gahbauer, Andreas Luttens, Jiankun Lyu, Chase M. Webb, Reed M. Stein, Elissa A. Fink, Trent E. Balius, Jens Carlsson, John J. Irwin, Brian K. Shoichet - Nature Protocols 2021 被引用: 542
- ZINC-22─A Free Multi-Billion-Scale Database of Tangible Compounds for Ligand Discovery
著者: Benjamin I. Tingle, Khanh G. Tang, Mar Castanon, John J. Gutierrez, Munkhzul Khurelbaatar, Chinzorig Dandarchuluun, Yurii S. Moroz, John J. Irwin - Journal of Chemical Information and Modeling, J. Chem. Inf. Model. 2023 被引用: 268
- Bespoke library docking for 5-HT2A receptor agonists with antidepressant activity
著者: Anat Levit Kaplan, Danielle N. Confair, Kuglae Kim, Ximena Barros-Álvarez, Ramona M. Rodriguiz, Yang Ying, Oh Sang Kweon, Tao Che, John D. McCorvy, David N. Kamber, James P. Phelan, Luan Carvalho Martins, Vladimir M. Pogorelov, Jeffrey F. DiBerto, Samuel T. Slocum, Xi‐Ping Huang, Manish K. Jain, Michael J. Robertson, Ouliana Panova, Alpay B. Seven, Autumn Q. Wetsel, William C. Wetsel, John J. Irwin, Georgios Skiniotis, Brian K. Shoichet, Bryan L. Roth, Jonathan A. Ellman - Nature 2022 被引用: 252
- Modeling the expansion of virtual screening libraries
著者: Jiankun Lyu, John J. Irwin, Brian K. Shoichet - Nature Chemical Biology 2023 被引用: 172
- Predicting new molecular targets for known drugs
著者: Michael J. Keiser, Vincent Setola, John J. Irwin, Christian Laggner, Atheir I. Abbas, Sandra J. Hufeisen, Niels Jensen, Michael B. Kuijer, Roberto C. Matos, Thuy Tran, Ryan Whaley, Richard A. Glennon, Jérôme Hert, Kelan Thomas, Douglas D. Edwards, Brian K. Shoichet, Bryan L. Roth - Nature 2009 被引用: 1,714
- Virtual discovery of melatonin receptor ligands to modulate circadian rhythms
著者: Reed M. Stein, Hye Jin Kang, John D. McCorvy, Grant C. Glatfelter, Anthony Jones, Tao Che, Samuel T. Slocum, Xi‐Ping Huang, Olena Savych, Yurii S. Moroz, Benjamin Stauch, Linda C. Johansson, Vadim Cherezov, Terry Kenakin, John J. Irwin, Brian K. Shoichet, Bryan L. Roth, Margarita L. Dubocovich - Nature 2020 被引用: 317
- AlphaFold2 structures guide prospective ligand discovery
著者: Jiankun Lyu, Nicholas J. Kapolka, Ryan H. Gumpper, Assaf Alon, Liang Wang, Manish K. Jain, Ximena Barros-Álvarez, Kensuke Sakamoto, Yoojoong Kim, Jeffrey F. DiBerto, Kuglae Kim, Isabella Glenn, Tia A. Tummino, Sijie Huang, John J. Irwin, Olga O. Tarkhanova, Yurii S. Moroz, Georgios Skiniotis, Andrew C. Kruse, Brian K. Shoichet, Bryan L. Roth - Science 2024 被引用: 140
- Structures of the σ2 receptor enable docking for bioactive ligand discovery
著者: Assaf Alon, Jiankun Lyu, João M. Bráz, Tia A. Tummino, Veronica Craik, Matthew J. O’Meara, Chase M. Webb, Dmytro S. Radchenko, Yurii S. Moroz, Xi‐Ping Huang, Yongfeng Liu, Bryan L. Roth, John J. Irwin, Allan I. Basbaum, Brian K. Shoichet, Andrew C. Kruse - Nature 2021 被引用: 194
- Property-Unmatched Decoys in Docking Benchmarks
著者: Reed M. Stein, Yang Ying, Trent E. Balius, Matt J. O’Meara, Jiankun Lyu, Jennifer J. Young, Khanh Tang, Brian K. Shoichet, John J. Irwin - Journal of Chemical Information and Modeling, J. Chem. Inf. Model. 2021 被引用: 140
- CACHE (Critical Assessment of Computational Hit-finding Experiments): A public–private partnership benchmarking initiative to enable the development of computational methods for hit-finding
著者: Suzanne Ackloo, Rima Al‐awar, Rommie E. Amaro, C.H. Arrowsmith, Hatylas Azevedo, Robert A. Batey, Yoshua Bengio, Ulrich A. K. Betz, Cristian Bologa, John D. Chodera, Wendy D. Cornell, Ian Dunham, Gerhard F. Ecker, Kristina Edfeldt, A.M. Edwards, Michael K. Gilson, Cláudia R. Gordijo, Gerhard Heßler, Alexander Hillisch, Anders Hogner, John J. Irwin, Johanna M. Jansen, Daniel Kühn, Andrew R. Leach, Alpha A. Lee, Uta Lessel, Maxwell R. Morgan, John Moult, Ingo Muegge, Tudor I. Oprea, Benjamin Perry, Patrick Riley, Sophie A. L. Rousseaux, Kumar Singh Saikatendu, Vijayaratnam Santhakumar, Matthieu Schapira, Cora Scholten, Matthew H. Todd, Masoud Vedadi, Andrea Volkamer, Timothy M. Willson - Nature Reviews Chemistry 2022 被引用: 102
- Ligand Pose and Orientational Sampling in Molecular Docking
著者: Ryan G. Coleman, Michael Carchia, Teague Sterling, John J. Irwin, Brian K. Shoichet - PLoS ONE 2013 被引用: 225
- Structure-based discovery of nonopioid analgesics acting through the α 2A -adrenergic receptor
著者: Elissa A. Fink, Jun Xu, Harald Hübner, João M. Bráz, Philipp Seemann, Charlotte Avet, Veronica Craik, Dorothée Weikert, Maximilian F. Schmidt, Chase M. Webb, Nataliya A. Tolmachova, Yurii S. Moroz, Xi‐Ping Huang, Chakrapani Kalyanaraman, Stefan Gahbauer, Geng Chen, Zheng Liu, Matthew P. Jacobson, John J. Irwin, Michel Bouvier, Yang Du, Brian K. Shoichet, Allan I. Basbaum, Peter Gmeiner - Science 2022 被引用: 152
- Fragment binding to the Nsp3 macrodomain of SARS-CoV-2 identified through crystallographic screening and computational docking
著者: M. Schuller, G.J. Correy, Stefan Gahbauer, D. Fearon, Taiasean Wu, Roberto Efraín Díaz, I.D. Young, Luan Carvalho Martins, Dominique H. Smith, Ursula Schulze‐Gahmen, Tristan W. Owens, Ishan Deshpande, Gregory E. Merz, Aye C. Thwin, J.T. Biel, Jessica K. Peters, Michelle Moritz, Nadia Herrera, Huong T. Kratochvil, A. Aimon, James M. Bennett, J. Brandão-Neto, Aina E. Cohen, Alexandre Dias, A. Douangamath, Louise Dunnett, Oleg Fedorov, Matteo P. Ferla, Martin R. Fuchs, T.J. Gorrie-Stone, James M. Holton, Michael G. Johnson, T. Krojer, G. Meigs, A.J. Powell, J.G.M. Rack, V.L. Rangel, Silvia Russi, R. Skyner, Clyde A. Smith, Alexei S. Soares, Jennifer L. Wierman, Kang Zhu, Peter O’Brien, Natalia Jura, Alan Ashworth, John J. Irwin, Michael C. Thompson, Jason E. Gestwicki, F. von Delft, Brian K. Shoichet, James S. Fraser, Ivan Ahel - Science Advances 2021 被引用: 208
- Benchmarking Sets for Molecular Docking
著者: Niu Huang, Brian K. Shoichet, John J. Irwin - Journal of Medicinal Chemistry 2006 被引用: 1,324
- Structure-based discovery of conformationally selective inhibitors of the serotonin transporter
著者: Isha Singh, Anubha Seth, Christian B. Billesbølle, João M. Bráz, Ramona M. Rodriguiz, Kasturi Roy, Bethlehem Bekele, Veronica Craik, Xi‐Ping Huang, Danila Boytsov, Vladimir M. Pogorelov, Parnian Lak, Henry O’Donnell, Walter Sandtner, John J. Irwin, Bryan L. Roth, Allan I. Basbaum, William C. Wetsel, Aashish Manglik, Brian K. Shoichet, Gary Rudnick - Cell 2023 被引用: 99
- Docking Screens for Novel Ligands Conferring New Biology
著者: John J. Irwin, Brian K. Shoichet - Journal of Medicinal Chemistry 2016 被引用: 286
- An Aggregation Advisor for Ligand Discovery
著者: John J. Irwin, Da Duan, Hayarpi Torosyan, Allison K. Doak, Kristin T. Ziebart, Teague Sterling, Gurgen Tumanian, Brian K. Shoichet - Journal of Medicinal Chemistry 2015 被引用: 429
- Covalent docking of large libraries for the discovery of chemical probes
著者: Nir London, Rand M. Miller, Shyam Krishnan, Kenji Uchida, John J. Irwin, O. Eidam, Lucie Gibold, Peter Cimermančič, Richard Bonnet, Brian K. Shoichet, Jack Taunton - Nature Chemical Biology 2014 被引用: 277
